Basic Information:

  VIRBase ID:  

HHID00098967

  Virus:  

Middle East respiratory syndrome-related coronavirus (MERS-CoV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-26a-1-3p:  MIMAT0004499          ST8SIA3:  NM_015879     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-26a-1-3p	ST8SIA3
miRBase Accession/Entrez ID	MIMAT0004499	51046
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	SIAT8C//ST8SiaIII

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-26a-1-3p	rs182070256 chr3:37969473    G/A rs771522629 chr3:37969472    C/T

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ST8SIA3	chr18:55027394-55027395(+) m6A CDS//intron       24981863 chr18:55027510-55027511(+) m6A 3'UTR//intron       25456834//24981863//22575960 chr18:55027582-55027583(+) m6A 3'UTR//intron       25456834//24981863//22575960 chr18:55027682-55027683(+) m6A 3'UTR//intron       24981863 chr18:55027710-55027711(+) m6A 3'UTR//intron       24981863 chr18:55027742-55027743(+) m6A 3'UTR//intron       24981863 chr18:55027798-55027799(+) m6A 3'UTR//intron       25456834//24981863 chr18:55027820-55027821(+) m6A 3'UTR//intron       25456834 chr18:55027893-55027894(+) m6A 3'UTR//intron       25456834 chr18:55027916-55027917(+) m6A 3'UTR//intron       25456834 chr18:55027941-55027942(+) m6A 3'UTR//intron       25456834 chr18:55035842-55035843(+) m6A 3'UTR//exon//intron       25456834//22575960 chr18:55035884-55035885(+) m6A 3'UTR//exon//intron       25456834//22575960 chr18:55035914-55035915(+) m6A 3'UTR//exon//intron       25456834//22575960 chr18:55035939-55035940(+) m6A 3'UTR//exon//intron       25456834//22575960 chr18:55035947-55035948(+) m6A 3'UTR//exon//intron       25456834//22575960 chr18:55035977-55035978(+) m6A 3'UTR//exon//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-26a-1-3p	Exosome Plasma     23663360 Exosome Plasma     24683445 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Mesenchymal stem cells     - Mitochondrion Skeletal muscle myoblasts     21637849

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-26a-1-3p
Interactor2: ST8SIA3

Evidence Support:

Weak-Evidence	Illumina sequencing
Prediction-Evidence	miRanda
Support Database	ViRBase

References:

PMID	32223537	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	Calu-3 cells	Interactor2 expression	Upregulation
Description	The miRNA-mRNA pairs with strong correlations were selected for miRNA-mRNA binding site prediction using miRanda.