Detail Information

Basic Information:


  VIRBase ID:  

HHID00098784

  Virus:  

Middle East respiratory syndrome-related coronavirus (MERS-CoV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa_circ_0032503 RGS17
miRBase
Accession/Entrez ID		 hsa_circ_0032503 26575
Organism Homo sapiens Homo sapiens
Category circRNA mRNA
Alias - hRGS17//RGS-17//RGSZ2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RGS17
chr6:153440662(-) A-I      intronic
chr6:153440653(-) A-I      intronic
chr6:153412802(-) A-I      intronic
chr6:153335769(-) A-I      intronic
chr6:153336865(-) A-I      intronic
chr6:153335793(-) A-I      intronic
chr6:153336846(-) A-I      intronic
chr6:153354731(-) A-I      intronic
chr6:153337067(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RGS17
chr6:153326450-153326451(-) m6A 3'UTR       24981863
chr6:153327690-153327691(-) m6A 3'UTR       24981863
chr6:153327715-153327716(-) m6A 3'UTR       24981863
chr6:153327740-153327741(-) m6A 3'UTR       24981863
chr6:153332248-153332249(-) m6A 3'UTR       24981863
chr6:153332694-153332695(-) m6A 3'UTR       24981863//22608085
chr6:153332766-153332767(-) m6A CDS       24981863//22608085
chr6:153345466-153345467(-) m6A CDS       24981863
chr6:153345484-153345485(-) m6A CDS       24981863//22608085
chr6:153345511-153345512(-) m6A CDS       24981863//22608085
chr6:153345530-153345531(-) m6A CDS       24981863//22608085
chr6:153345553-153345554(-) m6A CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa_circ_0032503
Exosome Blood     -
RGS17
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsa_circ_0032503
Interactor2: RGS17

Evidence Support:


Weak-Evidence Illumina sequencing
Support Database ViRBase

References:


PMID 32223537 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line Calu-3 cells Interactor2 expression None
Description The mRNA-circRNA pairs with strong positive correlations were defined as those having r >0.7 and cP <0.05.

Starting a new search, please wait ...