Detail Information

Basic Information:


  VIRBase ID:  

HHID00098712

  Virus:  

Middle East respiratory syndrome-related coronavirus (MERS-CoV)

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa_circ_0032503 hsa-miR-16-1-3p
miRBase
Accession/Entrez ID		 hsa_circ_0032503 MIMAT0004489
Organism Homo sapiens Homo sapiens
Category circRNA miRNA
Alias - -

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-16-1-3p
rs377111580 chr13:50048986    C/T
rs769728617 chr13:50048992    CA/C
rs1460126106 chr13:50049003    C/A
rs1460126106 chr13:50049003    C/T
rs1468155921 chr13:50049001    T/C

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa_circ_0032503
Exosome Blood     -
hsa-miR-16-1-3p
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa_circ_0032503
Interactor2: hsa-miR-16-1-3p

Evidence Support:


Weak-Evidence Illumina sequencing
Prediction-Evidence miRanda
Support Database ViRBase

References:


PMID 32223537 Target region None
Source ViRBase Interactor1 expression Upregulation
Tissue or cell line Calu-3 cells Interactor2 expression Downregulation
Description The circRNA-miRNA pairs with strong negative correlations were selected for circRNA-miRNA binding site prediction using miRanda (http://www.microrna.org/) v3.3a.

Starting a new search, please wait ...