Detail Information

Basic Information:


  VIRBase ID:  

HHID00098606

  Virus:  

Middle East respiratory syndrome-related coronavirus (MERS-CoV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa_circ_0002248 OLFML2A
miRBase
Accession/Entrez ID		 hsa_circ_0002248 169611
Organism Homo sapiens Homo sapiens
Category circRNA mRNA
Alias - PRO34319

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OLFML2A
chr9:127565257(+) A-I      intronic
chr9:127566788(+) A-I      intronic
chr9:127567105(+) A-I      intronic
chr9:127556147(+) A-I      intronic
chr9:127548207(+) A-I      intronic
chr9:127560951(+) A-I      intronic
chr9:127560937(+) A-I      intronic
chr9:127566770(+) A-I      intronic
chr9:127566769(+) A-I      intronic
chr9:127566747(+) A-I      intronic
chr9:127560948(+) A-I      intronic
chr9:127560917(+) A-I      intronic
chr9:127560903(+) A-I      intronic
chr9:127560955(+) A-I      intronic
chr9:127574613(+) A-I      3'UTR
chr9:127574584(+) A-I      3'UTR
chr9:127574596(+) A-I      3'UTR
chr9:127574579(+) A-I      3'UTR
chr9:127574557(+) A-I      3'UTR
chr9:127575283(+) A-I      3'UTR
chr9:127575288(+) A-I      3'UTR
chr9:127575348(+) A-I      3'UTR
chr9:127575300(+) A-I      3'UTR
chr9:127557862(+) A-I      intronic
chr9:127566734(+) A-I      intronic
chr9:127550112(+) A-I      intronic
chr9:127556139(+) A-I      intronic
chr9:127560858(+) A-I      intronic
chr9:127546622(+) A-I      intronic
chr9:127566741(+) A-I      intronic
chr9:127557882(+) A-I      intronic
chr9:127559481(+) A-I      intronic
chr9:127557838(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED OLFML2A
chr9:127566734(+) A-I intron -    21960545
chr9:127566741(+) A-I intron -    21960545

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OLFML2A
chr9:127549263-127549264(+) m6A CDS       24284625
chr9:127549269-127549270(+) m6A CDS       24284625
chr9:127549380-127549381(+) m6A CDS       24284625
chr9:127549397-127549398(+) m6A CDS       24284625
chr9:127557348-127557349(+) m6A CDS//intron       24284625
chr9:127557396-127557397(+) m6A CDS//intron       24284625
chr9:127563198-127563199(+) m6A 5'UTR//intron       24284625
chr9:127563717-127563718(+) m6A CDS       24284625
chr9:127563756-127563757(+) m6A CDS       24284625
chr9:127563772-127563773(+) m6A CDS       24284625
chr9:127566498-127566499(+) m6A CDS       24284625
chr9:127570098-127570099(+) m6A CDS       24284625
chr9:127570152-127570153(+) m6A CDS       24284625
chr9:127570203-127570204(+) m6A CDS       24284625
chr9:127570233-127570234(+) m6A CDS       24284625
chr9:127572185-127572186(+) m6A CDS       24284625//25456834//24981863//22575960
chr9:127572257-127572258(+) m6A CDS       24284625//25456834//24981863//22575960
chr9:127572282-127572283(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572290-127572291(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572392-127572393(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572421-127572422(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572433-127572434(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572449-127572450(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572461-127572462(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572497-127572498(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572647-127572648(+) m6A CDS       24284625//24209618//25456834//24981863//22575960
chr9:127572697-127572698(+) m6A 3'UTR       24284625//25456834//24981863//22575960
chr9:127572804-127572805(+) m6A 3'UTR       24284625//25456834//24981863//22575960
chr9:127572952-127572953(+) m6A 3'UTR       24284625//24209618//24981863
chr9:127572962-127572963(+) Cm 3'UTR       -
chr9:127572973-127572974(+) m6A 3'UTR       24284625//24209618//24981863
chr9:127573041-127573042(+) m6A 3'UTR       24284625//24981863
chr9:127573066-127573067(+) m6A 3'UTR       24284625//24981863
chr9:127573663-127573664(+) m6A 3'UTR       24284625
chr9:127573714-127573715(+) m6A 3'UTR       24284625
chr9:127573886-127573887(+) m6A 3'UTR       25456834//24981863
chr9:127573914-127573915(+) m6A 3'UTR       25456834//24981863
chr9:127573929-127573930(+) m6A 3'UTR       25456834//24981863
chr9:127573934-127573935(+) m6A 3'UTR       25456834//24981863
chr9:127573956-127573957(+) m6A 3'UTR       25456834//24981863
chr9:127574288-127574289(+) m6A 3'UTR       24284625//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa_circ_0002248
Exosome Blood     -
OLFML2A
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hsa_circ_0002248
Interactor2: OLFML2A

Evidence Support:


Weak-Evidence Illumina sequencing
Support Database ViRBase

References:


PMID 32223537 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line Calu-3 cells Interactor2 expression None
Description The mRNA-circRNA pairs with strong positive correlations were defined as those having r >0.7 and cP <0.05.

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