Detail Information

Basic Information:


  VIRBase ID:  

HHID00098605

  Virus:  

Middle East respiratory syndrome-related coronavirus (MERS-CoV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa_circ_0002248 KIAA1958
miRBase
Accession/Entrez ID		 hsa_circ_0002248 158405
Organism Homo sapiens Homo sapiens
Category circRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KIAA1958
chr9:115415994(+) A-I      intronic
chr9:115415146(+) A-I      intronic
chr9:115414943(+) A-I      intronic
chr9:115414286(+) A-I      intronic
chr9:115409015(+) A-I      intronic
chr9:115384098(+) A-I      intronic
chr9:115384092(+) A-I      intronic
chr9:115384084(+) A-I      intronic
chr9:115374586(+) A-I      intronic
chr9:115371140(+) A-I      intronic
chr9:115369627(+) A-I      intronic
chr9:115270165(+) A-I      intronic
chr9:115270115(+) A-I      intronic
chr9:115268681(+) A-I      intronic
chr9:115268559(+) A-I      intronic
chr9:115266635(+) A-I      intronic
chr9:115266630(+) A-I      intronic
chr9:115266606(+) A-I      intronic
chr9:115266547(+) A-I      intronic
chr9:115266486(+) A-I      intronic
chr9:115263632(+) A-I      intronic
chr9:115263558(+) A-I      intronic
chr9:115263307(+) A-I      intronic
chr9:115263264(+) A-I      intronic
chr9:115263239(+) A-I      intronic
chr9:115262561(+) A-I      intronic
chr9:115361228(+) A-I      intronic
chr9:115361212(+) A-I      intronic
chr9:115357799(+) A-I      intronic
chr9:115356275(+) A-I      intronic
chr9:115356248(+) A-I      intronic
chr9:115354039(+) A-I      intronic
chr9:115262547(+) A-I      intronic
chr9:115262522(+) A-I      intronic
chr9:115262498(+) A-I      intronic
chr9:115262456(+) A-I      intronic
chr9:115262175(+) A-I      intronic
chr9:115262110(+) A-I      intronic
chr9:115262086(+) A-I      intronic
chr9:115253406(+) A-I      intronic
chr9:115253370(+) A-I      intronic
chr9:115353895(+) A-I      intronic
chr9:115352768(+) A-I      intronic
chr9:115352761(+) A-I      intronic
chr9:115352706(+) A-I      intronic
chr9:115352652(+) A-I      intronic
chr9:115351751(+) A-I      intronic
chr9:115331970(+) A-I      intronic
chr9:115331088(+) A-I      intronic
chr9:115330975(+) A-I      intronic
chr9:115330899(+) A-I      intronic
chr9:115330107(+) A-I      intronic
chr9:115327664(+) A-I      intronic
chr9:115324067(+) A-I      intronic
chr9:115324014(+) A-I      intronic
chr9:115323979(+) A-I      intronic
chr9:115400273(+) A-I      intronic
chr9:115400278(+) A-I      intronic
chr9:115421189(+) A-I      intronic
chr9:115421141(+) A-I      intronic
chr9:115400279(+) A-I      intronic
chr9:115414366(+) A-I      intronic
chr9:115421134(+) A-I      intronic
chr9:115323595(+) A-I      intronic
chr9:115323492(+) A-I      intronic
chr9:115421052(+) A-I      intronic
chr9:115421137(+) A-I      intronic
chr9:115420990(+) A-I      intronic
chr9:115421143(+) A-I      intronic
chr9:115323474(+) A-I      intronic
chr9:115323428(+) A-I      intronic
chr9:115323390(+) A-I      intronic
chr9:115319313(+) A-I      intronic
chr9:115310384(+) A-I      intronic
chr9:115304042(+) A-I      intronic
chr9:115421179(+) A-I      intronic
chr9:115303810(+) A-I      intronic
chr9:115421185(+) A-I      intronic
chr9:115385497(+) A-I      intronic
chr9:115292330(+) A-I      intronic
chr9:115400286(+) A-I      intronic
chr9:115400268(+) A-I      intronic
chr9:115303253(+) A-I      intronic
chr9:115400271(+) A-I      intronic
chr9:115302247(+) A-I      intronic
chr9:115302239(+) A-I      intronic
chr9:115293440(+) A-I      intronic
chr9:115293414(+) A-I      intronic
chr9:115288794(+) A-I      intronic
chr9:115288651(+) A-I      intronic
chr9:115288620(+) A-I      intronic
chr9:115283724(+) A-I      intronic
chr9:115281423(+) A-I      intronic
chr9:115420399(+) A-I      intronic
chr9:115420337(+) A-I      intronic
chr9:115420316(+) A-I      intronic
chr9:115420310(+) A-I      intronic
chr9:115420263(+) A-I      intronic
chr9:115420237(+) A-I      intronic
chr9:115418637(+) A-I      intronic
chr9:115416121(+) A-I      intronic
chr9:115416033(+) A-I      intronic
chr9:115352712(+) A-I      intronic
chr9:115424873(+) A-I      3'UTR
chr9:115424912(+) A-I      3'UTR
chr9:115424914(+) A-I      3'UTR
chr9:115424919(+) A-I      3'UTR
chr9:115424920(+) A-I      3'UTR
chr9:115429813(+) A-I      3'UTR
chr9:115428369(+) A-I      3'UTR
chr9:115429767(+) A-I      3'UTR
chr9:115428377(+) A-I      3'UTR
chr9:115429717(+) A-I      3'UTR
chr9:115429736(+) A-I      3'UTR
chr9:115429656(+) A-I      3'UTR
chr9:115429768(+) A-I      3'UTR
chr9:115429658(+) A-I      3'UTR
chr9:115429702(+) A-I      3'UTR
chr9:115429679(+) A-I      3'UTR
chr9:115429697(+) A-I      3'UTR
chr9:115429698(+) A-I      3'UTR
chr9:115429700(+) A-I      3'UTR
chr9:115428284(+) A-I      3'UTR
chr9:115429703(+) A-I      3'UTR
chr9:115428485(+) A-I      3'UTR
chr9:115424925(+) A-I      3'UTR
chr9:115428378(+) A-I      3'UTR
chr9:115429694(+) A-I      3'UTR
chr9:115332166(+) A-I      intronic
chr9:115299465(+) A-I      intronic
chr9:115263142(+) A-I      intronic
chr9:115331981(+) A-I      intronic
chr9:115415017(+) A-I      intronic
chr9:115411701(+) A-I      intronic
chr9:115393659(+) A-I      intronic
chr9:115309570(+) A-I      intronic
chr9:115418563(+) A-I      intronic
chr9:115266634(+) A-I      intronic
chr9:115319351(+) A-I      intronic
chr9:115357814(+) A-I      intronic
chr9:115263510(+) A-I      intronic
chr9:115420262(+) A-I      intronic
chr9:115352911(+) A-I      intronic
chr9:115390022(+) A-I      intronic
chr9:115300491(+) A-I      intronic
chr9:115408923(+) A-I      intronic
chr9:115328198(+) A-I      intronic
chr9:115397608(+) A-I      intronic
chr9:115393766(+) A-I      intronic
chr9:115289961(+) A-I      intronic
chr9:115300425(+) A-I      intronic
chr9:115414420(+) A-I      intronic
chr9:115372109(+) A-I      intronic
chr9:115330934(+) A-I      intronic
chr9:115295883(+) A-I      intronic
chr9:115309578(+) A-I      intronic
chr9:115262462(+) A-I      intronic
chr9:115253514(+) A-I      intronic
chr9:115390021(+) A-I      intronic
chr9:115371871(+) A-I      intronic
chr9:115253374(+) A-I      intronic
chr9:115299525(+) A-I      intronic
chr9:115331060(+) A-I      intronic
chr9:115303063(+) A-I      intronic
chr9:115397624(+) A-I      intronic
chr9:115393763(+) A-I      intronic
chr9:115263512(+) A-I      intronic
chr9:115416087(+) A-I      intronic
chr9:115419431(+) A-I      intronic
chr9:115421153(+) A-I      intronic
chr9:115415041(+) A-I      intronic
chr9:115289967(+) A-I      intronic
chr9:115263329(+) A-I      intronic
chr9:115253411(+) A-I      intronic
chr9:115420200(+) A-I      intronic
chr9:115409012(+) A-I      intronic
chr9:115393612(+) A-I      intronic
chr9:115387702(+) A-I      intronic
chr9:115413898(+) A-I      intronic
chr9:115414964(+) A-I      intronic
chr9:115324028(+) A-I      intronic
chr9:115415051(+) A-I      intronic
chr9:115352731(+) A-I      intronic
chr9:115253265(+) A-I      intronic
chr9:115428461(+) A-I      3'UTR
chr9:115428474(+) A-I      3'UTR
chr9:115429696(+) A-I      3'UTR
chr9:115428394(+) A-I      3'UTR
chr9:115429735(+) A-I      3'UTR
chr9:115429655(+) A-I      3'UTR
chr9:115429680(+) A-I      3'UTR
chr9:115428432(+) A-I      3'UTR
chr9:115428391(+) A-I      3'UTR
chr9:115429709(+) A-I      3'UTR
chr9:115424911(+) A-I      3'UTR
chr9:115428493(+) A-I      3'UTR
chr9:115428404(+) A-I      3'UTR
chr9:115428426(+) A-I      3'UTR
chr9:115429835(+) A-I      3'UTR
chr9:115429758(+) A-I      3'UTR
chr9:115428417(+) A-I      3'UTR
chr9:115429673(+) A-I      3'UTR
chr9:115428418(+) A-I      3'UTR
chr9:115424913(+) A-I      3'UTR
chr9:115429671(+) A-I      3'UTR
chr9:115400527(+) A-I      intronic
chr9:115414939(+) A-I      intronic
chr9:115389787(+) A-I      intronic
chr9:115374643(+) A-I      intronic
chr9:115357879(+) A-I      intronic
chr9:115290106(+) A-I      intronic
chr9:115418395(+) A-I      intronic
chr9:115414947(+) A-I      intronic
chr9:115387686(+) A-I      intronic
chr9:115263150(+) A-I      intronic
chr9:115263324(+) A-I      intronic
chr9:115414329(+) A-I      intronic
chr9:115332165(+) A-I      intronic
chr9:115371855(+) A-I      intronic
chr9:115300349(+) A-I      intronic
chr9:115369602(+) A-I      intronic
chr9:115416004(+) A-I      intronic
chr9:115300427(+) A-I      intronic
chr9:115415919(+) A-I      intronic
chr9:115356195(+) A-I      intronic
chr9:115265839(+) A-I      intronic
chr9:115416140(+) A-I      intronic
chr9:115328203(+) A-I      intronic
chr9:115351288(+) A-I      intronic
chr9:115370932(+) A-I      intronic
chr9:115414351(+) A-I      intronic
chr9:115309388(+) A-I      intronic
chr9:115324055(+) A-I      intronic
chr9:115411652(+) A-I      intronic
chr9:115414433(+) A-I      intronic
chr9:115371944(+) A-I      intronic
chr9:115263208(+) A-I      intronic
chr9:115263127(+) A-I      intronic
chr9:115371971(+) A-I      intronic
chr9:115400602(+) A-I      intronic
chr9:115371090(+) A-I      intronic
chr9:115371950(+) A-I      intronic
chr9:115399855(+) A-I      intronic
chr9:115407336(+) A-I      intronic
chr9:115300557(+) A-I      intronic
chr9:115357669(+) A-I      intronic
chr9:115352650(+) A-I      intronic
chr9:115283569(+) A-I      intronic
chr9:115408910(+) A-I      intronic
chr9:115371925(+) A-I      intronic
chr9:115356365(+) A-I      intronic
chr9:115342925(+) A-I      intronic
chr9:115331107(+) A-I      intronic
chr9:115356278(+) A-I      intronic
chr9:115415092(+) A-I      intronic
chr9:115332018(+) A-I      intronic
chr9:115414381(+) A-I      intronic
chr9:115397631(+) A-I      intronic
chr9:115300504(+) A-I      intronic
chr9:115265808(+) A-I      intronic
chr9:115263280(+) A-I      intronic
chr9:115400692(+) A-I      intronic
chr9:115351328(+) A-I      intronic
chr9:115290066(+) A-I      intronic
chr9:115374509(+) A-I      intronic
chr9:115397643(+) A-I      intronic
chr9:115387532(+) A-I      intronic
chr9:115330900(+) A-I      intronic
chr9:115290966(+) A-I      intronic
chr9:115384142(+) A-I      intronic
chr9:115265718(+) A-I      intronic
chr9:115415031(+) A-I      intronic
chr9:115290132(+) A-I      intronic
chr9:115370991(+) A-I      intronic
chr9:115262017(+) A-I      intronic
chr9:115263244(+) A-I      intronic
chr9:115414931(+) A-I      intronic
chr9:115415077(+) A-I      intronic
chr9:115413768(+) A-I      intronic
chr9:115369544(+) A-I      intronic
chr9:115351725(+) A-I      intronic
chr9:115397595(+) A-I      intronic
chr9:115263674(+) A-I      intronic
chr9:115356284(+) A-I      intronic
chr9:115263675(+) A-I      intronic
chr9:115266731(+) A-I      intronic
chr9:115331093(+) A-I      intronic
chr9:115415978(+) A-I      intronic
chr9:115414336(+) A-I      intronic
chr9:115387550(+) A-I      intronic
chr9:115393625(+) A-I      intronic
chr9:115290965(+) A-I      intronic
chr9:115352732(+) A-I      intronic
chr9:115371965(+) A-I      intronic
chr9:115415179(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KIAA1958
chr9:115300349(+) A-I intron -    22327324
chr9:115259803(+) A-G intron -    22484847
chr9:115262462(+) A-G intron -    22484847
chr9:115265808(+) A-G intron -    22484847
chr9:115300349(+) A-G intron -    22484847
chr9:115384169(+) A-G intron -    22484847
chr9:115384172(+) A-G intron -    22484847
chr9:115389787(+) A-G intron -    22484847
chr9:115421153(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KIAA1958
chr9:115249376-115249377(+) m6A 5'UTR       24284625
chr9:115249388-115249389(+) m6A 5'UTR       24284625
chr9:115336429-115336430(+) m6A CDS       24284625//24981863//22608085
chr9:115336451-115336452(+) m6A CDS       24284625//24981863//22608085
chr9:115336458-115336459(+) m6A CDS       24284625//24981863//22608085
chr9:115336487-115336488(+) m6A CDS       24284625//24981863//22575960//22608085
chr9:115336639-115336640(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336645-115336646(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336674-115336675(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336694-115336695(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336705-115336706(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336712-115336713(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336749-115336750(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336759-115336760(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336784-115336785(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336842-115336843(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336849-115336850(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115336881-115336882(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr9:115336971-115336972(+) m6A CDS       24284625//25456834//24981863//22608085
chr9:115337013-115337014(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr9:115337034-115337035(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337064-115337065(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337077-115337078(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337112-115337113(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337153-115337154(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337193-115337194(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337209-115337210(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337237-115337238(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337244-115337245(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115337316-115337317(+) m6A CDS       24284625//25456834//24981863//22608085
chr9:115337355-115337356(+) m6A CDS       24284625//24981863//22608085
chr9:115380197-115380198(+) m6A CDS//intron       24284625
chr9:115380361-115380362(+) m6A CDS//intron       24284625//25456834//24981863//22608085
chr9:115380412-115380413(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085
chr9:115380490-115380491(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380574-115380575(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380741-115380742(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380750-115380751(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380764-115380765(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380779-115380780(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380818-115380819(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380834-115380835(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380918-115380919(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380963-115380964(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115380986-115380987(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115381022-115381023(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115381185-115381186(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115381214-115381215(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115381243-115381244(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115381394-115381395(+) m6A 3'UTR//intron       22608085
chr9:115381436-115381437(+) m6A 3'UTR//intron       22608085
chr9:115381446-115381447(+) m6A 3'UTR//intron       22608085
chr9:115408082-115408083(+) m6A CDS       24284625//22608085
chr9:115408091-115408092(+) m6A CDS       24284625//22608085
chr9:115421576-115421577(+) m6A CDS       24284625//24981863//22608085
chr9:115421612-115421613(+) m6A CDS       24284625//24981863//22608085
chr9:115421654-115421655(+) m6A CDS       24284625//24981863//22608085
chr9:115421724-115421725(+) m6A CDS       24284625//25456834//24981863//22608085
chr9:115421900-115421901(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr9:115421960-115421961(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115421969-115421970(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115421993-115421994(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422069-115422070(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422075-115422076(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422182-115422183(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422248-115422249(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422275-115422276(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422284-115422285(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr9:115422937-115422938(+) m6A 3'UTR       24284625//22608085
chr9:115422974-115422975(+) m6A 3'UTR       24284625//24981863//22608085
chr9:115423045-115423046(+) m6A 3'UTR       24284625//24981863//22608085
chr9:115423061-115423062(+) m6A 3'UTR       24284625//22608085
chr9:115423066-115423067(+) m6A 3'UTR       24284625//22608085
chr9:115423144-115423145(+) m6A 3'UTR       22608085
chr9:115423328-115423329(+) m6A 3'UTR       22608085
chr9:115423342-115423343(+) m6A 3'UTR       22608085
chr9:115423356-115423357(+) m6A 3'UTR       22608085
chr9:115423453-115423454(+) m6A 3'UTR       22608085
chr9:115424603-115424604(+) m6A 3'UTR       24284625//24981863
chr9:115424621-115424622(+) m6A 3'UTR       24284625//24981863
chr9:115426175-115426176(+) m6A 3'UTR       24981863
chr9:115426198-115426199(+) m6A 3'UTR       24981863
chr9:115426255-115426256(+) m6A 3'UTR       24981863
chr9:115429205-115429206(+) m6A 3'UTR       24981863
chr9:115429228-115429229(+) m6A 3'UTR       24981863
chr9:115429236-115429237(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa_circ_0002248
Exosome Blood     -
KIAA1958
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa_circ_0002248
Interactor2: KIAA1958

Evidence Support:


Weak-Evidence Illumina sequencing
Support Database ViRBase

References:


PMID 32223537 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line Calu-3 cells Interactor2 expression None
Description The mRNA-circRNA pairs with strong positive correlations were defined as those having r >0.7 and cP <0.05.

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