Detail Information

Basic Information:


  VIRBase ID:  

HHID00095467

  Virus:  

Human immunodeficiency virus (HIV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol LNC_001013 ATM
miRBase
Accession/Entrez ID		 LNC_001013 472
Organism Homo sapiens Homo sapiens
Category lncRNA mRNA
Alias - AT1//ATA//ATC//ATD//ATDC//ATE//TEL1//TELO1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ATM
chr11:108107123(+) A-I      intronic
chr11:108155808(+) A-I      intronic
chr11:108107124(+) A-I      intronic
chr11:108107145(+) A-I      intronic
chr11:108112611(+) A-I      intronic
chr11:108156960(+) A-I      intronic
chr11:108107149(+) A-I      intronic
chr11:108107156(+) A-I      intronic
chr11:108112601(+) A-I      intronic
chr11:108107111(+) A-I      intronic
chr11:108236532(+) A-I      3'UTR
chr11:108107139(+) A-I      intronic
chr11:108187700(+) A-I      intronic
chr11:108187685(+) A-I      intronic
chr11:108170125(+) A-I      intronic
chr11:108101446(+) A-I      intronic
chr11:108155908(+) A-I      intronic
chr11:108220378(+) A-I      intronic
chr11:108104149(+) A-I      intronic
chr11:108156825(+) A-I      intronic
chr11:108156849(+) A-I      intronic
chr11:108156981(+) A-I      intronic
chr11:108114328(+) A-I      intronic
chr11:108156997(+) A-I      intronic
chr11:108160612(+) A-I      intronic
chr11:108160734(+) A-I      intronic
chr11:108160737(+) A-I      intronic
chr11:108160747(+) A-I      intronic
chr11:108160862(+) A-I      intronic
chr11:108161089(+) A-I      intronic
chr11:108161098(+) A-I      intronic
chr11:108161114(+) A-I      intronic
chr11:108161152(+) A-I      intronic
chr11:108161416(+) A-I      intronic
chr11:108161779(+) A-I      intronic
chr11:108156826(+) A-I      intronic
chr11:108161799(+) A-I      intronic
chr11:108161881(+) A-I      intronic
chr11:108160820(+) A-I      intronic
chr11:108161945(+) A-I      intronic
chr11:108164538(+) A-I      intronic
chr11:108164539(+) A-I      intronic
chr11:108164547(+) A-I      intronic
chr11:108164549(+) A-I      intronic
chr11:108177916(+) A-I      intronic
chr11:108177920(+) A-I      intronic
chr11:108178086(+) A-I      intronic
chr11:108161297(+) A-I      intronic
chr11:108181883(+) A-I      intronic
chr11:108181940(+) A-I      intronic
chr11:108181954(+) A-I      intronic
chr11:108181964(+) A-I      intronic
chr11:108182189(+) A-I      intronic
chr11:108182218(+) A-I      intronic
chr11:108182237(+) A-I      intronic
chr11:108182239(+) A-I      intronic
chr11:108182321(+) A-I      intronic
chr11:108182327(+) A-I      intronic
chr11:108182350(+) A-I      intronic
chr11:108187594(+) A-I      intronic
chr11:108192345(+) A-I      intronic
chr11:108187684(+) A-I      intronic
chr11:108187692(+) A-I      intronic
chr11:108187719(+) A-I      intronic
chr11:108187728(+) A-I      intronic
chr11:108187730(+) A-I      intronic
chr11:108187735(+) A-I      intronic
chr11:108187778(+) A-I      intronic
chr11:108187856(+) A-I      intronic
chr11:108187918(+) A-I      intronic
chr11:108192271(+) A-I      intronic
chr11:108192278(+) A-I      intronic
chr11:108192324(+) A-I      intronic
chr11:108118440(+) A-I      intronic
chr11:108192359(+) A-I      intronic
chr11:108101594(+) A-I      intronic
chr11:108192502(+) A-I      intronic
chr11:108192946(+) A-I      intronic
chr11:108193061(+) A-I      intronic
chr11:108112651(+) A-I      intronic
chr11:108193064(+) A-I      intronic
chr11:108193115(+) A-I      intronic
chr11:108118506(+) A-I      intronic
chr11:108220130(+) A-I      intronic
chr11:108220377(+) A-I      intronic
chr11:108224006(+) A-I      intronic
chr11:108224148(+) A-I      intronic
chr11:108160714(+) A-I      intronic
chr11:108119420(+) A-I      intronic
chr11:108105401(+) A-I      intronic
chr11:108118462(+) A-I      intronic
chr11:108155790(+) A-I      intronic
chr11:108112660(+) A-I      intronic
chr11:108100446(+) A-I      intronic
chr11:108100625(+) A-I      intronic
chr11:108100964(+) A-I      intronic
chr11:108100991(+) A-I      intronic
chr11:108103414(+) A-I      intronic
chr11:108101068(+) A-I      intronic
chr11:108101546(+) A-I      intronic
chr11:108121109(+) A-I      intronic
chr11:108101610(+) A-I      intronic
chr11:108155872(+) A-I      intronic
chr11:108101614(+) A-I      intronic
chr11:108101706(+) A-I      intronic
chr11:108102213(+) A-I      intronic
chr11:108102222(+) A-I      intronic
chr11:108102245(+) A-I      intronic
chr11:108101443(+) A-I      intronic
chr11:108102247(+) A-I      intronic
chr11:108160624(+) A-I      intronic
chr11:108102261(+) A-I      intronic
chr11:108181882(+) A-I      intronic
chr11:108102274(+) A-I      intronic
chr11:108102303(+) A-I      intronic
chr11:108102276(+) A-I      intronic
chr11:108104216(+) A-I      intronic
chr11:108107007(+) A-I      intronic
chr11:108170164(+) A-I      intronic
chr11:108107038(+) A-I      intronic
chr11:108107070(+) A-I      intronic
chr11:108161215(+) A-I      intronic
chr11:108129962(+) A-I      intronic
chr11:108160724(+) A-I      intronic
chr11:108160617(+) A-I      intronic
chr11:108112544(+) A-I      intronic
chr11:108112620(+) A-I      intronic
chr11:108112637(+) A-I      intronic
chr11:108113911(+) A-I      intronic
chr11:108113930(+) A-I      intronic
chr11:108101448(+) A-I      intronic
chr11:108114115(+) A-I      intronic
chr11:108114255(+) A-I      intronic
chr11:108118403(+) A-I      intronic
chr11:108119354(+) A-I      intronic
chr11:108187532(+) A-I      intronic
chr11:108178062(+) A-I      intronic
chr11:108130945(+) A-I      intronic
chr11:108155826(+) A-I      intronic
chr11:108119377(+) A-I      intronic
chr11:108119426(+) A-I      intronic
chr11:108155756(+) A-I      intronic
chr11:108119451(+) A-I      intronic
chr11:108119454(+) A-I      intronic
chr11:108101595(+) A-I      intronic
chr11:108119455(+) A-I      intronic
chr11:108119487(+) A-I      intronic
chr11:108119494(+) A-I      intronic
chr11:108119521(+) A-I      intronic
chr11:108119527(+) A-I      intronic
chr11:108192901(+) A-I      intronic
chr11:108120941(+) A-I      intronic
chr11:108130888(+) A-I      intronic
chr11:108120943(+) A-I      intronic
chr11:108114290(+) A-I      intronic
chr11:108121016(+) A-I      intronic
chr11:108129961(+) A-I      intronic
chr11:108130039(+) A-I      intronic
chr11:108130887(+) A-I      intronic
chr11:108130919(+) A-I      intronic
chr11:108130959(+) A-I      intronic
chr11:108130073(+) A-I      intronic
chr11:108155791(+) A-I      intronic
chr11:108114150(+) A-I      intronic
chr11:108155828(+) A-I      intronic
chr11:108161210(+) A-I      intronic
chr11:108160795(+) A-I      intronic
chr11:108237793(+) A-I      3'UTR
chr11:108236747(+) A-I      3'UTR
chr11:108237819(+) A-I      3'UTR
chr11:108237880(+) A-I      3'UTR
chr11:108237765(+) A-I      3'UTR
chr11:108236650(+) A-I      3'UTR
chr11:108236641(+) A-I      3'UTR
chr11:108237856(+) A-I      3'UTR
chr11:108238001(+) A-I      3'UTR
chr11:108237818(+) A-I      3'UTR
chr11:108237867(+) A-I      3'UTR
chr11:108237784(+) A-I      3'UTR
chr11:108236746(+) A-I      3'UTR
chr11:108237740(+) A-I      3'UTR
chr11:108236614(+) A-I      3'UTR
chr11:108237957(+) A-I      3'UTR
chr11:108236529(+) A-I      3'UTR
chr11:108236658(+) A-I      3'UTR
chr11:108236665(+) A-I      3'UTR
chr11:108237754(+) A-I      3'UTR
chr11:108237794(+) A-I      3'UTR
chr11:108237913(+) A-I      3'UTR
chr11:108237758(+) A-I      3'UTR
chr11:108236707(+) A-I      3'UTR
chr11:108237997(+) A-I      3'UTR
chr11:108237903(+) A-I      3'UTR
chr11:108237814(+) A-I      3'UTR
chr11:108236677(+) A-I      3'UTR
chr11:108236603(+) A-I      3'UTR
chr11:108236594(+) A-I      3'UTR
chr11:108236579(+) A-I      3'UTR
chr11:108236540(+) A-I      3'UTR
chr11:108236636(+) A-I      3'UTR
chr11:108156795(+) A-I      intronic
chr11:108192975(+) A-I      intronic
chr11:108101618(+) A-I      intronic
chr11:108130836(+) A-I      intronic
chr11:108105306(+) A-I      intronic
chr11:108160786(+) A-I      intronic
chr11:108165382(+) A-I      intronic
chr11:108104427(+) A-I      intronic
chr11:108101528(+) A-I      intronic
chr11:108177977(+) A-I      intronic
chr11:108182176(+) A-I      intronic
chr11:108130101(+) A-I      intronic
chr11:108100984(+) A-I      intronic
chr11:108112575(+) A-I      intronic
chr11:108102185(+) A-I      intronic
chr11:108105469(+) A-I      intronic
chr11:108112576(+) A-I      intronic
chr11:108161455(+) A-I      intronic
chr11:108101664(+) A-I      intronic
chr11:108104493(+) A-I      intronic
chr11:108119460(+) A-I      intronic
chr11:108156794(+) A-I      intronic
chr11:108118423(+) A-I      intronic
chr11:108119547(+) A-I      intronic
chr11:108119456(+) A-I      intronic
chr11:108101626(+) A-I      intronic
chr11:108119338(+) A-I      intronic
chr11:108112661(+) A-I      intronic
chr11:108161128(+) A-I      intronic
chr11:108182400(+) A-I      intronic
chr11:108181902(+) A-I      intronic
chr11:108131024(+) A-I      intronic
chr11:108192268(+) A-I      intronic
chr11:108192907(+) A-I      intronic
chr11:108112598(+) A-I      intronic
chr11:108121065(+) A-I      intronic
chr11:108101503(+) A-I      intronic
chr11:108101106(+) A-I      intronic
chr11:108112654(+) A-I      intronic
chr11:108181764(+) A-I      intronic
chr11:108118537(+) A-I      intronic
chr11:108101075(+) A-I      intronic
chr11:108156990(+) A-I      intronic
chr11:108101522(+) A-I      intronic
chr11:108130095(+) A-I      intronic
chr11:108102351(+) A-I      intronic
chr11:108100547(+) A-I      intronic
chr11:108100438(+) A-I      intronic
chr11:108192403(+) A-I      intronic
chr11:108161260(+) A-I      intronic
chr11:108193062(+) A-I      intronic
chr11:108112554(+) A-I      intronic
chr11:108160821(+) A-I      intronic
chr11:108113824(+) A-I      intronic
chr11:108156937(+) A-I      intronic
chr11:108160616(+) A-I      intronic
chr11:108192999(+) A-I      intronic
chr11:108170286(+) A-I      intronic
chr11:108113909(+) A-I      intronic
chr11:108112539(+) A-I      intronic
chr11:108130825(+) A-I      intronic
chr11:108108930(+) A-I      intronic
chr11:108101554(+) A-I      intronic
chr11:108105408(+) A-I      intronic
chr11:108102227(+) A-I      intronic
chr11:108181894(+) A-I      intronic
chr11:108101555(+) A-I      intronic
chr11:108102264(+) A-I      intronic
chr11:108156920(+) A-I      intronic
chr11:108104419(+) A-I      intronic
chr11:108100541(+) A-I      intronic
chr11:108113913(+) A-I      intronic
chr11:108161407(+) A-I      intronic
chr11:108156858(+) A-I      intronic
chr11:108165360(+) A-I      intronic
chr11:108137664(+) A-I      intronic
chr11:108161091(+) A-I      intronic
chr11:108138487(+) A-I      intronic
chr11:108156864(+) A-I      intronic
chr11:108130901(+) A-I      intronic
chr11:108155870(+) A-I      intronic
chr11:108100592(+) A-I      intronic
chr11:108104494(+) A-I      intronic
chr11:108161150(+) A-I      intronic
chr11:108104146(+) A-I      intronic
chr11:108160866(+) A-I      intronic
chr11:108130826(+) A-I      intronic
chr11:108101023(+) A-I      intronic
chr11:108102344(+) A-I      intronic
chr11:108155813(+) A-I      intronic
chr11:108182203(+) A-I      intronic
chr11:108155939(+) A-I      intronic
chr11:108102161(+) A-I      intronic
chr11:108161095(+) A-I      intronic
chr11:108155786(+) A-I      intronic
chr11:108161179(+) A-I      intronic
chr11:108156863(+) A-I      intronic
chr11:108164414(+) A-I      intronic
chr11:108155710(+) A-I      intronic
chr11:108113881(+) A-I      intronic
chr11:108176035(+) A-I      intronic
chr11:108101558(+) A-I      intronic
chr11:108121063(+) A-I      intronic
chr11:108100914(+) A-I      intronic
chr11:108155730(+) A-I      intronic
chr11:108114327(+) A-I      intronic
chr11:108113885(+) A-I      intronic
chr11:108156955(+) A-I      intronic
chr11:108178058(+) A-I      intronic
chr11:108100463(+) A-I      intronic
chr11:108113834(+) A-I      intronic
chr11:108181923(+) A-I      intronic
chr11:108155766(+) A-I      intronic
chr11:108156803(+) A-I      intronic
chr11:108102252(+) A-I      intronic
chr11:108160618(+) A-I      intronic
chr11:108113933(+) A-I      intronic
chr11:108156961(+) A-I      intronic
chr11:108130962(+) A-I      intronic
chr11:108137672(+) A-I      intronic
chr11:108118525(+) A-I      intronic
chr11:108155787(+) A-I      intronic
chr11:108155804(+) A-I      intronic
chr11:108130069(+) A-I      intronic
chr11:108097795(+) A-I      intronic
chr11:108178018(+) A-I      intronic
chr11:108156985(+) A-I      intronic
chr11:108192906(+) A-I      intronic
chr11:108130823(+) A-I      intronic
chr11:108105461(+) A-I      intronic
chr11:108100509(+) A-I      intronic
chr11:108130154(+) A-I      intronic
chr11:108161169(+) A-I      intronic
chr11:108161475(+) A-I      intronic
chr11:108178060(+) A-I      intronic
chr11:108156919(+) A-I      intronic
chr11:108182241(+) A-I      intronic
chr11:108155718(+) A-I      intronic
chr11:108100430(+) A-I      intronic
chr11:108192951(+) A-I      intronic
chr11:108113903(+) A-I      intronic
chr11:108100686(+) A-I      intronic
chr11:108104556(+) A-I      intronic
chr11:108177981(+) A-I      intronic
chr11:108156989(+) A-I      intronic
chr11:108160808(+) A-I      intronic
chr11:108112569(+) A-I      intronic
chr11:108161207(+) A-I      intronic
chr11:108160838(+) A-I      intronic
chr11:108114193(+) A-I      intronic
chr11:108155961(+) A-I      intronic
chr11:108155934(+) A-I      intronic
chr11:108237990(+) A-I      3'UTR
chr11:108236485(+) A-I      3'UTR
chr11:108236596(+) A-I      3'UTR
chr11:108237738(+) A-I      3'UTR
chr11:108236477(+) A-I      3'UTR
chr11:108236591(+) A-I      3'UTR
chr11:108236635(+) A-I      3'UTR
chr11:108236469(+) A-I      3'UTR
chr11:108236523(+) A-I      3'UTR
chr11:108237844(+) A-I      3'UTR
chr11:108237832(+) A-I      3'UTR
chr11:108237896(+) A-I      3'UTR
chr11:108237921(+) A-I      3'UTR
chr11:108236705(+) A-I      3'UTR
chr11:108237854(+) A-I      3'UTR
chr11:108237899(+) A-I      3'UTR
chr11:108236708(+) A-I      3'UTR
chr11:108236598(+) A-I      3'UTR
chr11:108237975(+) A-I      3'UTR
chr11:108236595(+) A-I      3'UTR
chr11:108237881(+) A-I      3'UTR
chr11:108236597(+) A-I      3'UTR
chr11:108236569(+) A-I      3'UTR
chr11:108236645(+) A-I      3'UTR
chr11:108236524(+) A-I      3'UTR
chr11:108236609(+) A-I      3'UTR
chr11:108236600(+) A-I      3'UTR
chr11:108236668(+) A-I      3'UTR
chr11:108237953(+) A-I      3'UTR
chr11:108236502(+) A-I      3'UTR
chr11:108236617(+) A-I      3'UTR
chr11:108236491(+) A-I      3'UTR
chr11:108237976(+) A-I      3'UTR
chr11:108236486(+) A-I      3'UTR
chr11:108236521(+) A-I      3'UTR
chr11:108237734(+) A-I      3'UTR
chr11:108236580(+) A-I      3'UTR
chr11:108236494(+) A-I      3'UTR
chr11:108236513(+) A-I      3'UTR
chr11:108237988(+) A-I      3'UTR
chr11:108237890(+) A-I      3'UTR
chr11:108237815(+) A-I      3'UTR
chr11:108236706(+) A-I      3'UTR
chr11:108236662(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ATM
chr11:108236469(+) A-I exon 3'UTR    15258596   //22327324
chr11:108236477(+) A-I exon 3'UTR    15258596
chr11:108236485(+) A-I exon 3'UTR    15258596
chr11:108236486(+) A-I exon 3'UTR    15258596
chr11:108236491(+) A-I exon 3'UTR    15258596
chr11:108236494(+) A-I exon 3'UTR    15258596
chr11:108236513(+) A-I exon 3'UTR    15258596
chr11:108236521(+) A-I exon 3'UTR    15258596
chr11:108236523(+) A-I exon 3'UTR    15258596
chr11:108236524(+) A-I exon 3'UTR    15258596
chr11:108236594(+) A-I exon 3'UTR    15258596   //22327324
chr11:108236596(+) A-I exon 3'UTR    15258596
chr11:108236598(+) A-I exon 3'UTR    15258596
chr11:108237784(+) A-I exon 3'UTR    15258596
chr11:108237815(+) A-I exon 3'UTR    15258596   //22327324
chr11:108237832(+) A-I exon 3'UTR    15258596
chr11:108237844(+) A-I exon 3'UTR    15258596
chr11:108100541(+) A-I intron -    22327324
chr11:108130095(+) A-I intron -    22327324
chr11:108155787(+) A-I intron -    22327324
chr11:108155826(+) A-I intron -    22327324
chr11:108155934(+) A-I intron -    22327324
chr11:108155939(+) A-I intron -    22327324
chr11:108156794(+) A-I intron -    22327324
chr11:108161150(+) A-I intron -    22327324
chr11:108236705(+) A-I intron -    22327324
chr11:108237738(+) A-I intron -    22327324
chr11:108237899(+) A-I intron -    22327324
chr11:108237921(+) A-I intron -    22327324
chr11:108237953(+) A-I intron -    22327324
chr11:108237957(+) A-I intron -    22327324
chr11:108237975(+) A-I intron -    22327324
chr11:108237976(+) A-I intron -    22327324
chr11:108237988(+) A-I intron -    22327324
chr11:108100438(+) A-G intron -    22484847
chr11:108100463(+) A-G intron -    22484847
chr11:108100541(+) A-G intron -    22484847
chr11:108101443(+) A-G intron -    22484847
chr11:108101448(+) A-G intron -    22484847
chr11:108113881(+) A-G intron -    22484847
chr11:108113885(+) A-G intron -    22484847
chr11:108113909(+) A-G intron -    22484847
chr11:108130095(+) A-G intron -    22484847
chr11:108155718(+) A-G intron -    22484847
chr11:108155756(+) A-G intron -    22484847
chr11:108155766(+) A-G intron -    22484847
chr11:108155786(+) A-G intron -    22484847
chr11:108155787(+) A-G intron -    22484847
chr11:108155813(+) A-G intron -    22484847
chr11:108155826(+) A-G intron -    22484847
chr11:108155934(+) A-G intron -    22484847
chr11:108155939(+) A-G intron -    22484847
chr11:108156794(+) A-G intron -    22484847
chr11:108156795(+) A-G intron -    22484847
chr11:108156858(+) A-G intron -    22484847
chr11:108156864(+) A-G intron -    22484847
chr11:108156920(+) A-G intron -    22484847
chr11:108156955(+) A-G intron -    22484847
chr11:108156989(+) A-G intron -    22484847
chr11:108156990(+) A-G intron -    22484847
chr11:108161091(+) A-G intron -    22484847
chr11:108161150(+) A-G intron -    22484847
chr11:108166681(+) G-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ATM
chr11:108093270-108093271(+) m6A 5'UTR       24981863
chr11:108093282-108093283(+) m6A 5'UTR       24981863
chr11:108093295-108093296(+) m6A 5'UTR       24981863
chr11:108093300-108093301(+) m6A 5'UTR       24981863
chr11:108093316-108093317(+) m6A 5'UTR       24981863
chr11:108093367-108093368(+) m6A 5'UTR       24981863
chr11:108093613-108093614(+) m6A 5'UTR       25456834
chr11:108093778-108093779(+) m6A 5'UTR       24981863
chr11:108094502-108094503(+) m6A 5'UTR//intron       22608085
chr11:108094514-108094515(+) m6A 5'UTR//intron       22608085
chr11:108094538-108094539(+) m6A 5'UTR//intron       22608085
chr11:108196850-108196851(+) Cm CDS//exon       -
chr11:108218033-108218034(+) m6A CDS//exon       -
chr11:108218072-108218073(+) m6A CDS//exon       -
chr11:108224505-108224506(+) m6A CDS//exon       -
chr11:108224533-108224534(+) m6A CDS//exon       -
chr11:108224547-108224548(+) m6A CDS//exon       -
chr11:108225550-108225551(+) m6A CDS//exon       -
chr11:108225569-108225570(+) m6A CDS//exon       -
chr11:108225580-108225581(+) m6A CDS//exon       -
chr11:108235838-108235839(+) m6A CDS//exon       -
chr11:108235889-108235890(+) m6A CDS//exon       -
chr11:108236099-108236100(+) m6A CDS//exon       24284625//24981863//26404942//22608085
chr11:108236111-108236112(+) m6A CDS//exon       24284625//24981863//26404942//22608085
chr11:108236153-108236154(+) m6A CDS//exon       24284625//24981863//26404942//22608085
chr11:108236185-108236186(+) m6A CDS//exon       24284625//24981863//26404942//22608085
chr11:108236340-108236341(+) m6A 3'UTR//exon       26404942
chr11:108236419-108236420(+) m6A 3'UTR//exon       26404942
chr11:108238964-108238965(+) m6A 3'UTR       26404942
chr11:108239005-108239006(+) m6A 3'UTR       26404942
chr11:108239049-108239050(+) m6A 3'UTR       26404942
chr11:108239078-108239079(+) m6A 3'UTR       26404942
chr11:108239088-108239089(+) m6A 3'UTR       26404942
chr11:108239299-108239300(+) m6A 3'UTR       26404942//27773535
chr11:108239376-108239377(+) m6A 3'UTR       26404942
chr11:108239416-108239417(+) m6A 3'UTR       26404942
chr11:108239425-108239426(+) m6A 3'UTR       26404942
chr11:108239522-108239523(+) m6A 3'UTR       26404942
chr11:108239617-108239618(+) m6A 3'UTR       26404942
chr11:108239624-108239625(+) m6A 3'UTR       26404942
chr11:108239635-108239636(+) m6A 3'UTR       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ATM
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: LNC_001013
Interactor2: ATM

Evidence Support:


Weak-Evidence RNA-Seq
Support Database ViRBase

References:


PMID 32341894 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line CD4 T cells Interactor2 expression None
Description Based on previous DE analysis, 1109 DE lncRNAs targeting DE mRNAs were identified In all correlations (Table S6).

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