Detail Information

Basic Information:


  VIRBase ID:  

HHID00095300

  Virus:  

Human immunodeficiency virus (HIV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol ENST00000630823.2 KIAA0586
miRBase
Accession/Entrez ID		 ENST00000630823.2 9786
Organism Homo sapiens Homo sapiens
Category lncRNA mRNA
Alias - JBTS23//SRTD14//Talpid3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KIAA0586
chr14:58986075(+) A-I      intronic
chr14:58985729(+) A-I      intronic
chr14:58901728(+) A-I      intronic
chr14:58901729(+) A-I      intronic
chr14:58967312(+) A-I      intronic
chr14:58986061(+) A-I      intronic
chr14:58967292(+) A-I      intronic
chr14:58967303(+) A-I      intronic
chr14:58986043(+) A-I      intronic
chr14:58904228(+) A-I      intronic
chr14:58948697(+) A-I      intronic
chr14:58948704(+) A-I      intronic
chr14:58967391(+) A-I      intronic
chr14:58948712(+) A-I      intronic
chr14:58948737(+) A-I      intronic
chr14:58948804(+) A-I      intronic
chr14:58948872(+) A-I      intronic
chr14:58948888(+) A-I      intronic
chr14:58948973(+) A-I      intronic
chr14:58949005(+) A-I      intronic
chr14:58949099(+) A-I      intronic
chr14:58964659(+) A-I      intronic
chr14:58901781(+) A-I      intronic
chr14:58964665(+) A-I      intronic
chr14:58964676(+) A-I      intronic
chr14:58969120(+) A-I      intronic
chr14:58966120(+) A-I      intronic
chr14:58966177(+) A-I      intronic
chr14:58967258(+) A-I      intronic
chr14:58967261(+) A-I      intronic
chr14:58948555(+) A-I      intronic
chr14:58967265(+) A-I      intronic
chr14:58904273(+) A-I      intronic
chr14:58904242(+) A-I      intronic
chr14:58948806(+) A-I      intronic
chr14:58967320(+) A-I      intronic
chr14:58985592(+) A-I      intronic
chr14:58967325(+) A-I      intronic
chr14:58967329(+) A-I      intronic
chr14:58968923(+) A-I      intronic
chr14:58968971(+) A-I      intronic
chr14:58945285(+) A-I      intronic
chr14:58969078(+) A-I      intronic
chr14:58969079(+) A-I      intronic
chr14:58911664(+) A-I      intronic
chr14:58973703(+) A-I      intronic
chr14:58973709(+) A-I      intronic
chr14:58973724(+) A-I      intronic
chr14:58904243(+) A-I      intronic
chr14:58974577(+) A-I      intronic
chr14:58944837(+) A-I      intronic
chr14:58974582(+) A-I      intronic
chr14:58974583(+) A-I      intronic
chr14:58974632(+) A-I      intronic
chr14:58974670(+) A-I      intronic
chr14:58900525(+) A-I      intronic
chr14:58974700(+) A-I      intronic
chr14:58899975(+) A-I      intronic
chr14:58985666(+) A-I      intronic
chr14:58985674(+) A-I      intronic
chr14:58900019(+) A-I      intronic
chr14:59004799(+) A-I      intronic
chr14:58985700(+) A-I      intronic
chr14:58986022(+) A-I      intronic
chr14:58986096(+) A-I      intronic
chr14:58987314(+) A-I      intronic
chr14:58975800(+) A-I      intronic
chr14:58900505(+) A-I      intronic
chr14:58948649(+) A-I      intronic
chr14:58900602(+) A-I      intronic
chr14:58987341(+) A-I      intronic
chr14:58900702(+) A-I      intronic
chr14:58904350(+) A-I      intronic
chr14:58901515(+) A-I      intronic
chr14:58901631(+) A-I      intronic
chr14:58902632(+) A-I      intronic
chr14:58967221(+) A-I      intronic
chr14:58911799(+) A-I      intronic
chr14:58902610(+) A-I      intronic
chr14:58904182(+) A-I      intronic
chr14:58904258(+) A-I      intronic
chr14:58904250(+) A-I      intronic
chr14:58900642(+) A-I      intronic
chr14:58904275(+) A-I      intronic
chr14:58904311(+) A-I      intronic
chr14:58987496(+) A-I      intronic
chr14:58900501(+) A-I      intronic
chr14:58908102(+) A-I      intronic
chr14:58948792(+) A-I      intronic
chr14:58911281(+) A-I      intronic
chr14:58973781(+) A-I      intronic
chr14:58912294(+) A-I      intronic
chr14:58914299(+) A-I      intronic
chr14:58944799(+) A-I      intronic
chr14:58912611(+) A-I      intronic
chr14:58901742(+) A-I      intronic
chr14:58902688(+) A-I      intronic
chr14:58904274(+) A-I      intronic
chr14:58944968(+) A-I      intronic
chr14:58944855(+) A-I      intronic
chr14:58912702(+) A-I      intronic
chr14:58907302(+) A-I      intronic
chr14:58948791(+) A-I      intronic
chr14:58916149(+) A-I      intronic
chr14:58912862(+) A-I      intronic
chr14:58901636(+) A-I      intronic
chr14:59012504(+) A-I      intronic
chr14:58911680(+) A-I      intronic
chr14:58948997(+) A-I      intronic
chr14:58911241(+) A-I      intronic
chr14:58912712(+) A-I      intronic
chr14:58912713(+) A-I      intronic
chr14:58912736(+) A-I      intronic
chr14:58912768(+) A-I      intronic
chr14:58912975(+) A-I      intronic
chr14:58913053(+) A-I      intronic
chr14:58913054(+) A-I      intronic
chr14:58942628(+) A-I      intronic
chr14:58942637(+) A-I      intronic
chr14:58942737(+) A-I      intronic
chr14:58943485(+) A-I      intronic
chr14:58942598(+) A-I      intronic
chr14:58943503(+) A-I      intronic
chr14:58943522(+) A-I      intronic
chr14:58943611(+) A-I      intronic
chr14:58944871(+) A-I      intronic
chr14:58911750(+) A-I      intronic
chr14:58943515(+) A-I      intronic
chr14:58911736(+) A-I      intronic
chr14:58904314(+) A-I      intronic
chr14:58899832(+) A-I      intronic
chr14:58942562(+) A-I      intronic
chr14:58944863(+) A-I      intronic
chr14:58902477(+) A-I      intronic
chr14:58987454(+) A-I      intronic
chr14:58975677(+) A-I      intronic
chr14:58911219(+) A-I      intronic
chr14:58986057(+) A-I      intronic
chr14:58902482(+) A-I      intronic
chr14:58949093(+) A-I      intronic
chr14:58902444(+) A-I      intronic
chr14:58901707(+) A-I      intronic
chr14:58912956(+) A-I      intronic
chr14:58904278(+) A-I      intronic
chr14:58985994(+) A-I      intronic
chr14:58912366(+) A-I      intronic
chr14:58942800(+) A-I      intronic
chr14:58913143(+) A-I      intronic
chr14:58901769(+) A-I      intronic
chr14:58900626(+) A-I      intronic
chr14:58945103(+) A-I      intronic
chr14:58900478(+) A-I      intronic
chr14:58906046(+) A-I      intronic
chr14:58904351(+) A-I      intronic
chr14:58985980(+) A-I      intronic
chr14:58904345(+) A-I      intronic
chr14:58945233(+) A-I      intronic
chr14:58911819(+) A-I      intronic
chr14:58948715(+) A-I      intronic
chr14:58906044(+) A-I      intronic
chr14:58912864(+) A-I      intronic
chr14:58942728(+) A-I      intronic
chr14:58967161(+) A-I      intronic
chr14:58948601(+) A-I      intronic
chr14:58943612(+) A-I      intronic
chr14:58942664(+) A-I      intronic
chr14:58986090(+) A-I      intronic
chr14:58973732(+) A-I      intronic
chr14:58943486(+) A-I      intronic
chr14:58974669(+) A-I      intronic
chr14:58901727(+) A-I      intronic
chr14:58969577(+) A-I      intronic
chr14:58945181(+) A-I      intronic
chr14:58966232(+) A-I      intronic
chr14:58901582(+) A-I      intronic
chr14:58987358(+) A-I      intronic
chr14:58906167(+) A-I      intronic
chr14:58945252(+) A-I      intronic
chr14:58901508(+) A-I      intronic
chr14:58943651(+) A-I      intronic
chr14:58901709(+) A-I      intronic
chr14:58899959(+) A-I      intronic
chr14:58943498(+) A-I      intronic
chr14:58973243(+) A-I      intronic
chr14:58901646(+) A-I      intronic
chr14:58902565(+) A-I      intronic
chr14:58975791(+) A-I      intronic
chr14:58900059(+) A-I      intronic
chr14:58911617(+) A-I      intronic
chr14:58969043(+) A-I      intronic
chr14:58968966(+) A-I      intronic
chr14:58902567(+) A-I      intronic
chr14:58987521(+) A-I      intronic
chr14:58987319(+) A-I      intronic
chr14:58943566(+) A-I      intronic
chr14:58943543(+) A-I      intronic
chr14:58904247(+) A-I      intronic
chr14:58901512(+) A-I      intronic
chr14:58944807(+) A-I      intronic
chr14:58905985(+) A-I      intronic
chr14:58907189(+) A-I      intronic
chr14:58905941(+) A-I      intronic
chr14:58902627(+) A-I      intronic
chr14:58962120(+) A-I      intronic
chr14:58943615(+) A-I      intronic
chr14:58966281(+) A-I      intronic
chr14:58911690(+) A-I      intronic
chr14:59004745(+) A-I      intronic
chr14:58916039(+) A-I      intronic
chr14:58942705(+) A-I      intronic
chr14:58968993(+) A-I      intronic
chr14:58900578(+) A-I      intronic
chr14:58900484(+) A-I      intronic
chr14:58912687(+) A-I      intronic
chr14:58902506(+) A-I      intronic
chr14:58987433(+) A-I      intronic
chr14:58942798(+) A-I      intronic
chr14:58985769(+) A-I      intronic
chr14:58900068(+) A-I      intronic
chr14:58943560(+) A-I      intronic
chr14:58942736(+) A-I      intronic
chr14:58942722(+) A-I      intronic
chr14:58911786(+) A-I      intronic
chr14:58916179(+) A-I      intronic
chr14:58987434(+) A-I      intronic
chr14:58943586(+) A-I      intronic
chr14:58945080(+) A-I      intronic
chr14:59004758(+) A-I      intronic
chr14:58900659(+) A-I      intronic
chr14:58904282(+) A-I      intronic
chr14:58962124(+) A-I      intronic
chr14:59004755(+) A-I      intronic
chr14:58913052(+) A-I      intronic
chr14:58932886(+) A-I      intronic
chr14:58904388(+) A-I      intronic
chr14:58906009(+) A-I      intronic
chr14:58932868(+) A-I      intronic
chr14:58945311(+) A-I      intronic
chr14:58944838(+) A-I      intronic
chr14:58904370(+) A-I      intronic
chr14:58942603(+) A-I      intronic
chr14:58900596(+) A-I      intronic
chr14:58904157(+) A-I      intronic
chr14:58973240(+) A-I      intronic
chr14:59004858(+) A-I      intronic
chr14:58969041(+) A-I      intronic
chr14:58904219(+) A-I      intronic
chr14:58942563(+) A-I      intronic
chr14:58901696(+) A-I      intronic
chr14:58943616(+) A-I      intronic
chr14:58902526(+) A-I      intronic
chr14:58901510(+) A-I      intronic
chr14:58949037(+) A-I      intronic
chr14:58949094(+) A-I      intronic
chr14:58902443(+) A-I      intronic
chr14:58913068(+) A-I      intronic
chr14:58900574(+) A-I      intronic
chr14:58901563(+) A-I      intronic
chr14:59015374(+) A-I      3'UTR
chr14:59015361(+) A-I      3'UTR
chr14:59015378(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KIAA0586
chr14:58986090(+) A-I intron -    22327324
chr14:59015374(+) A-I intron -    22327324
chr14:58900626(+) A-I intron -    21960545
chr14:58900642(+) A-I intron -    21960545
chr14:58900642(+) A-G intron -    22484847
chr14:58904242(+) A-G intron -    22484847
chr14:58904243(+) A-G intron -    22484847
chr14:58904250(+) A-G intron -    22484847
chr14:58904274(+) A-G intron -    22484847
chr14:58904282(+) A-G intron -    22484847
chr14:58911690(+) A-G intron -    22484847
chr14:58986057(+) A-G intron -    22484847
chr14:58986090(+) A-G intron -    22484847
chr14:58998069(+) T-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KIAA0586
chr14:58894167-58894168(+) m6A 5'UTR       24981863
chr14:58894213-58894214(+) m6A 5'UTR       24981863
chr14:58894268-58894269(+) m6A 5'UTR       24981863
chr14:58894540-58894541(+) m6A 5'UTR//intron       24284625//24981863//22608085
chr14:58895041-58895042(+) m6A 5'UTR//CDS//intron       22608085
chr14:58926565-58926566(+) m6A CDS//exon//intron       24981863
chr14:58926575-58926576(+) m6A CDS//exon//intron       24981863
chr14:58926586-58926587(+) m6A CDS//exon//intron       24981863
chr14:58926617-58926618(+) m6A CDS//exon//intron       24981863//27773535
chr14:58926653-58926654(+) m6A CDS//exon//intron       24981863
chr14:58926671-58926672(+) m6A CDS//exon//intron       24981863
chr14:58926700-58926701(+) m6A CDS//exon//intron       24981863
chr14:58927804-58927805(+) m6A CDS//exon       24981863
chr14:58927843-58927844(+) m6A CDS//exon       24981863
chr14:58927852-58927853(+) m6A CDS//exon       24981863
chr14:58932575-58932576(+) m6A CDS//exon       24981863
chr14:58932581-58932582(+) m6A CDS//exon       24981863
chr14:58932601-58932602(+) m6A CDS//exon       24981863
chr14:58932628-58932629(+) m6A CDS//exon       24981863
chr14:58937429-58937430(+) m6A CDS//exon       24981863
chr14:58988173-58988174(+) m6A intron       -
chr14:58988403-58988404(+) m6A intron       27773535
chr14:58988429-58988430(+) m6A intron       24981863//27773535
chr14:58988452-58988453(+) m6A intron       24981863//27773535//22608085
chr14:58988461-58988462(+) m6A intron       24981863//27773535//22608085
chr14:58988531-58988532(+) m6A intron       24284625//24981863//27773535//22608085
chr14:58988583-58988584(+) m6A intron       24284625//24981863//27773535//22608085
chr14:58988680-58988681(+) m6A intron       24981863
chr14:59014716-59014717(+) m6A 3'UTR//exon       24981863
chr14:59014728-59014729(+) m6A 3'UTR//exon       24981863
chr14:59014783-59014784(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KIAA0586
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: ENST00000630823.2
Interactor2: KIAA0586

Evidence Support:


Weak-Evidence RNA-Seq
Support Database ViRBase

References:


PMID 32341894 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line CD4 T cells Interactor2 expression None
Description Based on previous DE analysis, 1109 DE lncRNAs targeting DE mRNAs were identified In all correlations (Table S6).

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