Detail Information

Basic Information:


  VIRBase ID:  

HHID00095258

  Virus:  

Human immunodeficiency virus (HIV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol ENST00000432070.2 DNAJC7
miRBase
Accession/Entrez ID		 ENST00000432070.2 7266
Organism Homo sapiens Homo sapiens
Category lncRNA mRNA
Alias - DJ11//DJC7//TPR2//TTC2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DNAJC7
chr17:40133101(-) A-I      intronic
chr17:40136954(-) A-I      intronic
chr17:40132292(-) A-I      intronic
chr17:40138246(-) A-I      intronic
chr17:40136992(-) A-I      intronic
chr17:40136984(-) A-I      intronic
chr17:40138301(-) A-I      intronic
chr17:40132243(-) A-I      intronic
chr17:40136978(-) A-I      intronic
chr17:40133106(-) A-I      intronic
chr17:40156887(-) A-I      intronic
chr17:40156870(-) A-I      intronic
chr17:40152332(-) A-I      intronic
chr17:40152331(-) A-I      intronic
chr17:40152319(-) A-I      intronic
chr17:40152306(-) A-I      intronic
chr17:40136957(-) A-I      intronic
chr17:40152301(-) A-I      intronic
chr17:40152274(-) A-I      intronic
chr17:40138254(-) A-I      intronic
chr17:40133121(-) A-I      intronic
chr17:40132237(-) A-I      intronic
chr17:40136941(-) A-I      intronic
chr17:40133111(-) A-I      intronic
chr17:40132236(-) A-I      intronic
chr17:40132261(-) A-I      intronic
chr17:40167619(-) A-I      intronic
chr17:40167618(-) A-I      intronic
chr17:40167215(-) A-I      intronic
chr17:40167214(-) A-I      intronic
chr17:40167094(-) A-I      intronic
chr17:40166856(-) A-I      intronic
chr17:40165972(-) A-I      intronic
chr17:40165826(-) A-I      intronic
chr17:40164943(-) A-I      intronic
chr17:40158159(-) A-I      intronic
chr17:40158239(-) A-I      intronic
chr17:40158296(-) A-I      intronic
chr17:40136398(-) A-I      intronic
chr17:40159730(-) A-I      intronic
chr17:40166739(-) A-I      intronic
chr17:40159735(-) A-I      intronic
chr17:40159774(-) A-I      intronic
chr17:40160243(-) A-I      intronic
chr17:40160286(-) A-I      intronic
chr17:40160314(-) A-I      intronic
chr17:40160837(-) A-I      intronic
chr17:40160850(-) A-I      intronic
chr17:40160863(-) A-I      intronic
chr17:40160877(-) A-I      intronic
chr17:40160890(-) A-I      intronic
chr17:40160922(-) A-I      intronic
chr17:40130633(-) A-I      intronic
chr17:40130684(-) A-I      intronic
chr17:40131288(-) A-I      intronic
chr17:40131535(-) A-I      intronic
chr17:40131578(-) A-I      intronic
chr17:40131590(-) A-I      intronic
chr17:40131738(-) A-I      intronic
chr17:40131811(-) A-I      intronic
chr17:40131817(-) A-I      intronic
chr17:40131892(-) A-I      intronic
chr17:40133598(-) A-I      intronic
chr17:40133629(-) A-I      intronic
chr17:40134797(-) A-I      intronic
chr17:40164244(-) A-I      intronic
chr17:40164259(-) A-I      intronic
chr17:40164281(-) A-I      intronic
chr17:40164321(-) A-I      intronic
chr17:40164357(-) A-I      intronic
chr17:40167795(-) A-I      intronic
chr17:40134820(-) A-I      intronic
chr17:40135280(-) A-I      intronic
chr17:40135384(-) A-I      intronic
chr17:40135416(-) A-I      intronic
chr17:40136414(-) A-I      intronic
chr17:40136419(-) A-I      intronic
chr17:40136433(-) A-I      intronic
chr17:40136970(-) A-I      intronic
chr17:40137006(-) A-I      intronic
chr17:40136360(-) A-I      intronic
chr17:40167681(-) A-I      intronic
chr17:40167633(-) A-I      intronic
chr17:40164444(-) A-I      intronic
chr17:40164438(-) A-I      intronic
chr17:40164382(-) A-I      intronic
chr17:40137022(-) A-I      intronic
chr17:40137023(-) A-I      intronic
chr17:40137040(-) A-I      intronic
chr17:40138201(-) A-I      intronic
chr17:40138244(-) A-I      intronic
chr17:40138275(-) A-I      intronic
chr17:40138276(-) A-I      intronic
chr17:40138315(-) A-I      intronic
chr17:40144228(-) A-I      intronic
chr17:40144229(-) A-I      intronic
chr17:40145288(-) A-I      intronic
chr17:40149493(-) A-I      intronic
chr17:40149539(-) A-I      intronic
chr17:40150127(-) A-I      intronic
chr17:40151032(-) A-I      intronic
chr17:40164377(-) A-I      intronic
chr17:40152330(-) A-I      intronic
chr17:40152418(-) A-I      intronic
chr17:40156089(-) A-I      intronic
chr17:40156151(-) A-I      intronic
chr17:40156219(-) A-I      intronic
chr17:40156271(-) A-I      intronic
chr17:40156888(-) A-I      intronic
chr17:40156911(-) A-I      intronic
chr17:40156924(-) A-I      intronic
chr17:40156931(-) A-I      intronic
chr17:40156960(-) A-I      intronic
chr17:40156967(-) A-I      intronic
chr17:40157035(-) A-I      intronic
chr17:40158038(-) A-I      intronic
chr17:40158083(-) A-I      intronic
chr17:40158090(-) A-I      intronic
chr17:40131857(-) A-I      intronic
chr17:40159706(-) A-I      intronic
chr17:40152265(-) A-I      intronic
chr17:40162388(-) A-I      intronic
chr17:40164389(-) A-I      intronic
chr17:40158874(-) A-I      intronic
chr17:40144385(-) A-I      intronic
chr17:40156991(-) A-I      intronic
chr17:40160566(-) A-I      intronic
chr17:40135210(-) A-I      intronic
chr17:40149532(-) A-I      intronic
chr17:40133320(-) A-I      intronic
chr17:40166020(-) A-I      intronic
chr17:40152335(-) A-I      intronic
chr17:40131737(-) A-I      intronic
chr17:40158248(-) A-I      intronic
chr17:40132228(-) A-I      intronic
chr17:40132206(-) A-I      intronic
chr17:40162427(-) A-I      intronic
chr17:40167202(-) A-I      intronic
chr17:40166253(-) A-I      intronic
chr17:40166695(-) A-I      intronic
chr17:40133156(-) A-I      intronic
chr17:40165859(-) A-I      intronic
chr17:40132587(-) A-I      intronic
chr17:40159650(-) A-I      intronic
chr17:40165097(-) A-I      intronic
chr17:40167809(-) A-I      intronic
chr17:40133620(-) A-I      intronic
chr17:40158517(-) A-I      intronic
chr17:40145235(-) A-I      intronic
chr17:40156076(-) A-I      intronic
chr17:40133122(-) A-I      intronic
chr17:40138346(-) A-I      intronic
chr17:40135335(-) A-I      intronic
chr17:40130798(-) A-I      intronic
chr17:40160955(-) A-I      intronic
chr17:40138284(-) A-I      intronic
chr17:40165098(-) A-I      intronic
chr17:40160208(-) A-I      intronic
chr17:40145949(-) A-I      intronic
chr17:40167201(-) A-I      intronic
chr17:40134977(-) A-I      intronic
chr17:40166675(-) A-I      intronic
chr17:40136948(-) A-I      intronic
chr17:40131935(-) A-I      intronic
chr17:40144371(-) A-I      intronic
chr17:40157926(-) A-I      intronic
chr17:40164338(-) A-I      intronic
chr17:40164401(-) A-I      intronic
chr17:40131794(-) A-I      intronic
chr17:40156919(-) A-I      intronic
chr17:40159741(-) A-I      intronic
chr17:40134918(-) A-I      intronic
chr17:40158862(-) A-I      intronic
chr17:40165038(-) A-I      intronic
chr17:40158732(-) A-I      intronic
chr17:40167277(-) A-I      intronic
chr17:40138139(-) A-I      intronic
chr17:40159639(-) A-I      intronic
chr17:40165880(-) A-I      intronic
chr17:40136460(-) A-I      intronic
chr17:40162243(-) A-I      intronic
chr17:40167863(-) A-I      intronic
chr17:40158749(-) A-I      intronic
chr17:40135267(-) A-I      intronic
chr17:40135324(-) A-I      intronic
chr17:40135264(-) A-I      intronic
chr17:40145365(-) A-I      intronic
chr17:40159768(-) A-I      intronic
chr17:40142893(-) A-I      intronic
chr17:40164258(-) A-I      intronic
chr17:40138343(-) A-I      intronic
chr17:40134780(-) A-I      intronic
chr17:40156935(-) A-I      intronic
chr17:40131897(-) A-I      intronic
chr17:40134866(-) A-I      intronic
chr17:40136450(-) A-I      intronic
chr17:40132536(-) A-I      intronic
chr17:40135211(-) A-I      intronic
chr17:40164418(-) A-I      intronic
chr17:40149941(-) A-I      intronic
chr17:40158703(-) A-I      intronic
chr17:40135355(-) A-I      intronic
chr17:40136882(-) A-I      intronic
chr17:40134610(-) A-I      intronic
chr17:40149552(-) A-I      intronic
chr17:40164953(-) A-I      intronic
chr17:40160923(-) A-I      intronic
chr17:40158210(-) A-I      intronic
chr17:40150167(-) A-I      intronic
chr17:40166089(-) A-I      intronic
chr17:40158972(-) A-I      intronic
chr17:40160002(-) A-I      intronic
chr17:40138297(-) A-I      intronic
chr17:40159743(-) A-I      intronic
chr17:40159680(-) A-I      intronic
chr17:40165910(-) A-I      intronic
chr17:40133352(-) A-I      intronic
chr17:40159975(-) A-I      intronic
chr17:40156111(-) A-I      intronic
chr17:40156088(-) A-I      intronic
chr17:40158165(-) A-I      intronic
chr17:40138240(-) A-I      intronic
chr17:40143829(-) A-I      intronic
chr17:40135239(-) A-I      intronic
chr17:40144374(-) A-I      intronic
chr17:40156921(-) A-I      intronic
chr17:40167825(-) A-I      intronic
chr17:40159008(-) A-I      intronic
chr17:40156872(-) A-I      intronic
chr17:40134840(-) A-I      intronic
chr17:40160244(-) A-I      intronic
chr17:40156110(-) A-I      intronic
chr17:40131724(-) A-I      intronic
chr17:40145233(-) A-I      intronic
chr17:40161009(-) A-I      intronic
chr17:40165037(-) A-I      intronic
chr17:40152340(-) A-I      intronic
chr17:40159745(-) A-I      intronic
chr17:40167271(-) A-I      intronic
chr17:40136899(-) A-I      intronic
chr17:40131867(-) A-I      intronic
chr17:40159618(-) A-I      intronic
chr17:40145475(-) A-I      intronic
chr17:40135160(-) A-I      intronic
chr17:40135240(-) A-I      intronic
chr17:40158264(-) A-I      intronic
chr17:40133188(-) A-I      intronic
chr17:40135197(-) A-I      intronic
chr17:40156981(-) A-I      intronic
chr17:40143963(-) A-I      intronic
chr17:40132301(-) A-I      intronic
chr17:40138262(-) A-I      intronic
chr17:40167870(-) A-I      intronic
chr17:40166721(-) A-I      intronic
chr17:40156983(-) A-I      intronic
chr17:40133343(-) A-I      intronic
chr17:40165052(-) A-I      intronic
chr17:40145355(-) A-I      intronic
chr17:40135289(-) A-I      intronic
chr17:40160906(-) A-I      intronic
chr17:40149496(-) A-I      intronic
chr17:40160247(-) A-I      intronic
chr17:40131736(-) A-I      intronic
chr17:40159638(-) A-I      intronic
chr17:40130688(-) A-I      intronic
chr17:40160246(-) A-I      intronic
chr17:40158928(-) A-I      intronic
chr17:40138267(-) A-I      intronic
chr17:40143945(-) A-I      intronic
chr17:40137136(-) A-I      intronic
chr17:40132232(-) A-I      intronic
chr17:40160864(-) A-I      intronic
chr17:40136592(-) A-I      intronic
chr17:40131305(-) A-I      intronic
chr17:40165155(-) A-I      intronic
chr17:40134856(-) A-I      intronic
chr17:40167698(-) A-I      intronic
chr17:40132238(-) A-I      intronic
chr17:40164417(-) A-I      intronic
chr17:40150953(-) A-I      intronic
chr17:40132241(-) A-I      intronic
chr17:40138307(-) A-I      intronic
chr17:40131165(-) A-I      intronic
chr17:40158998(-) A-I      intronic
chr17:40164337(-) A-I      intronic
chr17:40135345(-) A-I      intronic
chr17:40135336(-) A-I      intronic
chr17:40134598(-) A-I      intronic
chr17:40158100(-) A-I      intronic
chr17:40150986(-) A-I      intronic
chr17:40138192(-) A-I      intronic
chr17:40150099(-) A-I      intronic
chr17:40156943(-) A-I      intronic
chr17:40167810(-) A-I      intronic
chr17:40135310(-) A-I      intronic
chr17:40167820(-) A-I      intronic
chr17:40135281(-) A-I      intronic
chr17:40157012(-) A-I      intronic
chr17:40150009(-) A-I      intronic
chr17:40149943(-) A-I      intronic
chr17:40166672(-) A-I      intronic
chr17:40134926(-) A-I      intronic
chr17:40167135(-) A-I      intronic
chr17:40131343(-) A-I      intronic
chr17:40166246(-) A-I      intronic
chr17:40138272(-) A-I      intronic
chr17:40158168(-) A-I      intronic
chr17:40135235(-) A-I      intronic
chr17:40166716(-) A-I      intronic
chr17:40134811(-) A-I      intronic
chr17:40144328(-) A-I      intronic
chr17:40166282(-) A-I      intronic
chr17:40166637(-) A-I      intronic
chr17:40137114(-) A-I      intronic
chr17:40132196(-) A-I      intronic
chr17:40151024(-) A-I      intronic
chr17:40167750(-) A-I      intronic
chr17:40158139(-) A-I      intronic
chr17:40131896(-) A-I      intronic
chr17:40165251(-) A-I      intronic
chr17:40167737(-) A-I      intronic
chr17:40156948(-) A-I      intronic
chr17:40150444(-) A-I      intronic
chr17:40158953(-) A-I      intronic
chr17:40132667(-) A-I      intronic
chr17:40133092(-) A-I      intronic
chr17:40158630(-) A-I      intronic
chr17:40136496(-) A-I      intronic
chr17:40160218(-) A-I      intronic
chr17:40164449(-) A-I      intronic
chr17:40166324(-) A-I      intronic
chr17:40165950(-) A-I      intronic
chr17:40134976(-) A-I      intronic
chr17:40131464(-) A-I      intronic
chr17:40158214(-) A-I      intronic
chr17:40131649(-) A-I      intronic
chr17:40142869(-) A-I      intronic
chr17:40134902(-) A-I      intronic
chr17:40167284(-) A-I      intronic
chr17:40167673(-) A-I      intronic
chr17:40132294(-) A-I      intronic
chr17:40158769(-) A-I      intronic
chr17:40138296(-) A-I      intronic
chr17:40166254(-) A-I      intronic
chr17:40164379(-) A-I      intronic
chr17:40167279(-) A-I      intronic
chr17:40160202(-) A-I      intronic
chr17:40133166(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DNAJC7
chr17:40165037(-) A-I intron -    15342557
chr17:40165038(-) A-I intron -    15342557
chr17:40165052(-) A-I intron -    15342557
chr17:40165097(-) A-I intron -    15342557
chr17:40165880(-) A-I intron -    15342557
chr17:40165950(-) A-I intron -    15342557
chr17:40166020(-) A-I intron -    15342557
chr17:40166672(-) A-I intron -    15342557
chr17:40166695(-) A-I intron -    15342557
chr17:40166721(-) A-I intron -    15342557
chr17:40167673(-) A-I intron -    15342557
chr17:40167698(-) A-I intron -    15342557
chr17:40167737(-) A-I intron -    15342557
chr17:40167750(-) A-I intron -    15342557
chr17:40167809(-) A-I intron -    15342557
chr17:40167820(-) A-I intron -    15342557
chr17:40130688(-) A-I intron -    22327324
chr17:40158100(-) A-I intron -    22327324
chr17:40167201(-) A-I intron -    22327324
chr17:40167277(-) A-I intron -    22327324
chr17:40138272(-) A-I intron -    21960545
chr17:40156872(-) A-I intron -    21960545
chr17:40130688(-) A-G intron -    22484847
chr17:40131343(-) A-G intron -    22484847
chr17:40134780(-) A-G intron -    22484847
chr17:40136948(-) A-G intron -    22484847
chr17:40138262(-) A-G intron -    22484847
chr17:40138267(-) A-G intron -    22484847
chr17:40138272(-) A-G intron -    22484847
chr17:40138296(-) A-G intron -    22484847
chr17:40156111(-) A-G intron -    22484847
chr17:40156921(-) A-G intron -    22484847
chr17:40158100(-) A-G intron -    22484847
chr17:40158264(-) A-G intron -    22484847
chr17:40165251(-) A-G intron -    22484847
chr17:40165880(-) A-G intron -    22484847
chr17:40166675(-) A-G intron -    22484847
chr17:40166721(-) A-G intron -    22484847
chr17:40167201(-) A-G intron -    22484847
chr17:40167202(-) A-G intron -    22484847
chr17:40167277(-) A-G intron -    22484847
chr17:40167750(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DNAJC7
chr17:40128541-40128542(-) m6A 3'UTR       24981863//27773535
chr17:40128571-40128572(-) m6A 3'UTR       -
chr17:40128584-40128585(-) m6A 3'UTR       -
chr17:40133757-40133758(-) m6A exon//intron       27773535
chr17:40133901-40133902(-) m6A 3'UTR//CDS//exon//intron       27773535//27371828
chr17:40133906-40133907(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828//22575960
chr17:40133923-40133924(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828//22575960
chr17:40133977-40133978(-) m1A 3'UTR//CDS//exon//intron       26863196
chr17:40134317-40134318(-) Gm 3'UTR//CDS//exon       -
chr17:40134337-40134338(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22608085
chr17:40134384-40134385(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22608085
chr17:40134411-40134412(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr17:40134417-40134418(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr17:40135586-40135587(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//22575960//22608085
chr17:40135595-40135596(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//22575960//22608085
chr17:40135615-40135616(-) m6A 3'UTR//CDS       24981863//28052920//27773535//22575960//22608085
chr17:40135638-40135639(-) m6A 3'UTR//CDS       24981863//28052920//27773535//22575960//22608085
chr17:40135645-40135646(-) m6A 3'UTR//CDS       24981863//28052920//27773535//22575960//22608085
chr17:40136348-40136349(-) m6A exon//intron       24981863//28052920//27773535//22575960//22608085
chr17:40136417-40136418(-) m6A exon//intron       24981863//27773535//22575960
chr17:40139677-40139678(-) m6A 3'UTR//exon//intron       24981863//22575960
chr17:40139690-40139691(-) m6A CDS//exon//intron       24981863//22575960
chr17:40139899-40139900(-) m6A 3'UTR//CDS//exon       24981863//26404942//22575960//22608085
chr17:40139919-40139920(-) m6A 3'UTR//CDS//exon       24981863//26404942//22575960//22608085
chr17:40140782-40140783(-) m6A 3'UTR//CDS//exon       24981863//26404942//27773535//22575960//22608085
chr17:40140793-40140794(-) m6A 3'UTR//CDS//exon       24981863//26404942//27773535//22575960//22608085
chr17:40140810-40140811(-) m6A 3'UTR//CDS//exon       24981863//26404942//27773535//22575960//22608085
chr17:40140836-40140837(-) m6A 3'UTR//CDS//exon       24981863//26404942//27773535//22575960//22608085
chr17:40140848-40140849(-) m6A 3'UTR//CDS       24981863//26404942//27773535//22575960//22608085
chr17:40148361-40148362(-) m6A 3'UTR//CDS//intron       22575960
chr17:40148439-40148440(-) m6A 3'UTR//CDS//intron       22575960
chr17:40152566-40152567(-) m6A 3'UTR//5'UTR//CDS//intron       25456834//24981863//27371828
chr17:40152577-40152578(-) m6A 3'UTR//5'UTR//CDS//exon//intron       25456834//24981863//27371828
chr17:40153040-40153041(-) m6A 5'UTR//exon//intron       25456834//24981863//27371828
chr17:40169598-40169599(-) m6A 5'UTR//intron       24981863
chr17:40169608-40169609(-) m6A 5'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DNAJC7
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ENST00000432070.2
Interactor2: DNAJC7

Evidence Support:


Weak-Evidence RNA-Seq
Support Database ViRBase

References:


PMID 32341894 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line CD4 T cells Interactor2 expression None
Description Based on previous DE analysis, 1109 DE lncRNAs targeting DE mRNAs were identified In all correlations (Table S6).

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