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Detail Information
Basic Information:
VIRBase ID:
HHID00095231
Virus:
Rotavirus
Host:
Sus scrofa
Confidence Score:
0.8808
Interaction Type:
Host-Host interaction
Predicted Binding:
mmu-miR-155-5p:
MIMAT0000165
IFNB1:
NM_001003923
*
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Interactor Information:
Interactor1
Interactor2
Symbol
mmu-miR-155-5p
IFNB1
miRBase
Accession/Entrez ID
MIMAT0000165
445459
Organism
Sus scrofa
Sus scrofa
Category
miRNA
mRNA
Alias
-
IFN-beta//IFNb
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
mmu-miR-155-5p
Exosome
Mouse metastatic mammary carcinoma cells (4T1)|Non-tumorigenic mouse mammary epithelial cells (NMuMG)
25446899
Exosome
Bone marrow-derived dendritic cells
26084661
Exosome
Serum
28160157
Exosome
B6 BMDCs
22031862
Exosome
Mouse hypothalamic neuronal cell line (GT1-7)
22965126
Exosome
Bone marrow-derived macrophages
25159140
Mitochondrion
Hippocampus neuron|Liver tissue
27396686
Mitochondrion
Liver tissue
20733615
Nucleus
Cortex neurons|Hippocampus neurons
28804446
Interaction Network
(The top 100 interactions)
:
Interactor1: mmu-miR-155-5p
Interactor2: IFNB1
Evidence Support:
Strong-Evidence
qRT-PCR//Western blot
Support Database
ViRBase
References:
PMID
31330869
Target region
None
Source
ViRBase
Interactor1 expression
Upregulation
Tissue or cell line
IPEC-J2 cells
Interactor2 expression
Downregulation
Description
Overexpression of miR-155-5p remarkably suppressed the mRNA expression levels of TBK1, IRF3, and IFN-beta (p < 0.01), while the inhibition of miR-155-5p enhanced the expressions of these genes (p < 0.01) compared to our control group.
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