Detail Information

Basic Information:


  VIRBase ID:  

HHID00095211

  Virus:  

Orf virus

  Host:  

Capra hircus

  Confidence Score:  

0.6666

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol cfa-let-7a_R+2 SLC25A39
miRBase
Accession/Entrez ID		 cfa-let-7a_R+2 102187893
Organism Capra hircus Capra hircus
Category miRNA mRNA
Alias - -

Interaction Network (The top 100 interactions):


Interactor1: cfa-let-7a_R+2
Interactor2: SLC25A39

Evidence Support:


Weak-Evidence MiRNA sequencing//RNA-Seq
Prediction-Evidence miRanda//Targetscan
Support Database ViRBase

References:


PMID 31963559 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line GSF cells Interactor2 expression None
Description Among the validated DE miRNAs, cfa-let-7a_R+2 was the most upregulated, therefore it was chosen for further analysis. Target gene prediction identified 55 potential targets for this miRNA.

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