Basic Information:
VIRBase ID: HHID00095186
Virus: Orf virus
Host: Capra hircus
Confidence Score: 0.6666
Interaction Type: Host-Host interaction
Interactor Information:
Interactor1
Interactor2
Symbol
cfa-let-7a_R+2
CHD4
miRBase Accession/Entrez ID
cfa-let-7a_R+2
102174819
Organism
Capra hircus
Capra hircus
Category
miRNA
mRNA
Alias
-
-
Interaction Network (The top 100 interactions) :
Interactor1: cfa-let-7a_R+2
Interactor2: CHD4
Evidence Support:
Weak-Evidence
MiRNA sequencing//RNA-Seq
Prediction-Evidence
miRanda//Targetscan
Support Database
ViRBase
References:
PMID
31963559
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
GSF cells
Interactor2 expression
None
Description
Among the validated DE miRNAs, cfa-let-7a_R+2 was the most upregulated, therefore it was chosen for further analysis. Target gene prediction identified 55 potential targets for this miRNA.