Detail Information

Basic Information:


  VIRBase ID:  

HHID00093558

  Virus:  

Senecavirus A

  Host:  

Sus scrofa

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol ssc-miR-7134-5p MSTRG.18940.1
miRBase
Accession/Entrez ID		 MIMAT0028143 MSTRG.18940.1
Organism Sus scrofa Sus scrofa
Category miRNA lncRNA
Alias - -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ssc-miR-7134-5p
Exosome Porcine milk     24499489

Interaction Network (The top 100 interactions):


Interactor1: ssc-miR-7134-5p
Interactor2: MSTRG.18940.1

Evidence Support:


Weak-Evidence RNA-Seq
Prediction-Evidence miRanda
Support Database ViRBase

References:


PMID 32605750 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line None Interactor2 expression Upregulation
Description The lncRNA-miRNA-mRNA ceRNA network of MSTRG.18940.1 constructed using the Cytoscape program for the SVV group.Fig. 5. MSTRG.18940.1 upregulation over the course of SVV infection.

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