Basic Information:
VIRBase ID: HHID00093118
Virus: Oropouche virus
Host: Homo sapiens
Confidence Score: 0.6061
Interaction Type: Host-Host interaction
Predicted Binding:
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Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-217-5p
ATP6V1A
miRBase Accession/Entrez ID
MIMAT0000274
523
Organism
Homo sapiens
Homo sapiens
Category
miRNA
mRNA
Alias
-
ARCL2D//ATP6A1//ATP6V1A1//DEE93//HO68//IECEE3//VA68//Vma1//VPP2
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-217-5p
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
ATP6V1A
Resource
Symbol
Editing Position
Change
SeqReg
exReg
PMID
DARNED
ATP6V1A
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
ATP6V1A
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-217-5p
ATP6V1A
Interaction Network (The top 100 interactions) :
Interactor1: hsa-miR-217-5p
Interactor2: ATP6V1A
Evidence Support:
Weak-Evidence
miRNA array
Prediction-Evidence
miRanda//miRBase//miRTarget2//PicTar//TarBase//Targetscan
Support Database
ViRBase
References:
PMID
29813068
Target region
None
Source
ViRBase
Interactor1 expression
Upregulation
Tissue or cell line
Huh-7 cells
Interactor2 expression
None
Description
We selected 95 target genes, which were either in the group of 195 predicted target genes (92 genes) and/or either were already published as target genes for those miRNAs, to evaluate their expression through RT-PCR in OROV infected hepatocyte cells.