Detail Information

Basic Information:


  VIRBase ID:  

HHID00092995

  Virus:  

Murine respirovirus (Sendai virus)

  Host:  

Homo sapiens

  Confidence Score:  

0.9820

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol lnc-MxA IFNB1
miRBase
Accession/Entrez ID		 lnc-MxA 3456
Organism Homo sapiens Homo sapiens
Category lncRNA mRNA
Alias - IFB//IFF//IFN-beta//IFNB

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IFNB1
chr9:21077198-21077199(-) m6A 3'UTR       27773535
chr9:21077273-21077274(-) m6A 3'UTR       27773535
chr9:21077278-21077279(-) m6A 3'UTR       27773535
chr9:21077308-21077309(-) m6A CDS       27773535
chr9:21077328-21077329(-) m6A CDS       27773535
chr9:21077347-21077348(-) m6A CDS       27773535
chr9:21077375-21077376(-) m6A CDS       27773535
chr9:21077592-21077593(-) m6A CDS       27773535
chr9:21077611-21077612(-) m6A CDS       27773535
chr9:21077695-21077696(-) m6A CDS       27773535
chr9:21077704-21077705(-) m6A CDS       27773535

Interaction Network (The top 100 interactions):


Interactor1: lnc-MxA
Interactor2: IFNB1

Evidence Support:


Strong-Evidence ChIRP-qPCR//Luciferase reporter assay//RT-qPCR//Western blot
Support Database ViRBase

References:


PMID 31434735 Target region None
Source ViRBase Interactor1 expression Upregulation
Tissue or cell line 293T cells Interactor2 expression Downregulation
Description Lnc-MxA inhibits the activation of IFN-beta.

Starting a new search, please wait ...