Detail Information

Basic Information:


  VIRBase ID:  

HHID00092867

  Virus:  

Influenza A virus (A/Brisbane/10/2007(H3N2))

  Host:  

Homo sapiens

  Confidence Score:  

0.6743

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-937-5p:           IFNA1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-937-5p IFNA1
miRBase
Accession/Entrez ID
MIMAT0022938 3439
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - IFL//IFN//IFN-ALPHA//IFN-alphaD//IFNA13//IFNA@//leIF D

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-937-5p
rs1206103807 chr8:143813013    G/A
rs1213977544 chr8:143813019    C/T
rs1318905167 chr8:143813020    C/G
rs1462097886 chr8:143813013    GCCCCA/G
rs372364994 chr8:143813012    A/G
rs761985672 chr8:143813016    C/A
rs761985672 chr8:143813016    C/G
rs766167551 chr8:143813018    A/G
rs769052591 chr8:143813010    C/A
rs769052591 chr8:143813010    C/T
rs1194683616 chr8:143813023    G/A
rs759210043 chr8:143813027    C/T
rs776649723 chr8:143813022    T/G

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-937-5p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-937-5p
Interactor2: IFNA1

Evidence Support:


Weak-Evidence MiRNA microarray//RNA-Seq
Prediction-Evidence microRNA.org//PITA//Targetscan
Support Database ViRBase

References:


PMID 30605755 Target region None
Source ViRBase Interactor1 expression Downregulation
Tissue or cell line A549 cells Interactor2 expression Upregulation
Description A. Relationships between miRNAs and inversely correlated mRNAs involved in the influenza A pathway.

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