Detail Information

Basic Information:


  VIRBase ID:  

HHID00092453

  Virus:  

Influenza A virus (A/swine/Guangxi/3861/2011(H1N1))

  Host:  

Homo sapiens

  Confidence Score:  

0.6743

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-467-3p STAT2
miRBase
Accession/Entrez ID		 hsa-miR-467-3p 6773
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - IMD44//ISGF-3//P113//PTORCH3//STAT113

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR STAT2
chr12:56736312(-) A-I      3'UTR
chr12:56736305(-) A-I      3'UTR
chr12:56736292(-) A-I      3'UTR
chr12:56736288(-) A-I      3'UTR
chr12:56746299(-) A-I      intronic
chr12:56746873(-) A-I      intronic
chr12:56746896(-) A-I      intronic
chr12:56747671(-) A-I      intronic
chr12:56736343(-) A-I      3'UTR
chr12:56736328(-) A-I      3'UTR
chr12:56736370(-) A-I      3'UTR
chr12:56736368(-) A-I      3'UTR
chr12:56736372(-) A-I      3'UTR
chr12:56736322(-) A-I      3'UTR
chr12:56736371(-) A-I      3'UTR
chr12:56745879(-) A-I      intronic
chr12:56745896(-) A-I      intronic
chr12:56746283(-) A-I      intronic
chr12:56745737(-) A-I      intronic
chr12:56746797(-) A-I      intronic
chr12:56747552(-) A-I      intronic
chr12:56746870(-) A-I      intronic
chr12:56746875(-) A-I      intronic
chr12:56747055(-) A-I      intronic
chr12:56745739(-) A-I      intronic
chr12:56746889(-) A-I      intronic
chr12:56746914(-) A-I      intronic
chr12:56745744(-) A-I      intronic
chr12:56746936(-) A-I      intronic
chr12:56745792(-) A-I      intronic
chr12:56745793(-) A-I      intronic
chr12:56747535(-) A-I      intronic
chr12:56746941(-) A-I      intronic
chr12:56752167(-) A-I      intronic
chr12:56745841(-) A-I      intronic
chr12:56746956(-) A-I      intronic
chr12:56752162(-) A-I      intronic
chr12:56752141(-) A-I      intronic
chr12:56745805(-) A-I      intronic
chr12:56746963(-) A-I      intronic
chr12:56752138(-) A-I      intronic
chr12:56747566(-) A-I      intronic
chr12:56746743(-) A-I      intronic
chr12:56746995(-) A-I      intronic
chr12:56741391(-) A-I      intronic
chr12:56747680(-) A-I      intronic
chr12:56745774(-) A-I      intronic
chr12:56747173(-) A-I      intronic
chr12:56746883(-) A-I      intronic
chr12:56747694(-) A-I      intronic
chr12:56747167(-) A-I      intronic
chr12:56741567(-) A-I      intronic
chr12:56745886(-) A-I      intronic
chr12:56747747(-) A-I      intronic
chr12:56746986(-) A-I      intronic
chr12:56741424(-) A-I      intronic
chr12:56741450(-) A-I      intronic
chr12:56747045(-) A-I      intronic
chr12:56746290(-) A-I      intronic
chr12:56747574(-) A-I      intronic
chr12:56753115(-) A-I      intronic
chr12:56747615(-) A-I      intronic
chr12:56746865(-) A-I      intronic
chr12:56736258(-) A-I      3'UTR
chr12:56735958(-) A-I      3'UTR
chr12:56746884(-) A-I      intronic
chr12:56747697(-) A-I      intronic
chr12:56741414(-) A-I      intronic
chr12:56747704(-) A-I      intronic
chr12:56745915(-) A-I      intronic
chr12:56747658(-) A-I      intronic
chr12:56747533(-) A-I      intronic
chr12:56747632(-) A-I      intronic
chr12:56752633(-) A-I      intronic
chr12:56752135(-) A-I      intronic
chr12:56745681(-) A-I      intronic
chr12:56746297(-) A-I      intronic
chr12:56745815(-) A-I      intronic
chr12:56747032(-) A-I      intronic
chr12:56746728(-) A-I      intronic
chr12:56746701(-) A-I      intronic
chr12:56747018(-) A-I      intronic
chr12:56747556(-) A-I      intronic
chr12:56746696(-) A-I      intronic
chr12:56747586(-) A-I      intronic
chr12:56746830(-) A-I      intronic
chr12:56747650(-) A-I      intronic
chr12:56745933(-) A-I      intronic
chr12:56747573(-) A-I      intronic
chr12:56746365(-) A-I      intronic
chr12:56746962(-) A-I      intronic
chr12:56746987(-) A-I      intronic
chr12:56738667(-) A-I      intronic
chr12:56753116(-) A-I      intronic
chr12:56746906(-) A-I      intronic
chr12:56747561(-) A-I      intronic
chr12:56745876(-) A-I      intronic
chr12:56753145(-) A-I      intronic
chr12:56745962(-) A-I      intronic
chr12:56747717(-) A-I      intronic
chr12:56746324(-) A-I      intronic
chr12:56746892(-) A-I      intronic
chr12:56747575(-) A-I      intronic
chr12:56752674(-) A-I      intronic
chr12:56747612(-) A-I      intronic
chr12:56747648(-) A-I      intronic
chr12:56741410(-) A-I      intronic
chr12:56745814(-) A-I      intronic
chr12:56746803(-) A-I      intronic
chr12:56750878(-) A-I      intronic
chr12:56745769(-) A-I      intronic
chr12:56753171(-) A-I      intronic
chr12:56747154(-) A-I      intronic
chr12:56753158(-) A-I      intronic
chr12:56752676(-) A-I      intronic
chr12:56745745(-) A-I      intronic
chr12:56746961(-) A-I      intronic
chr12:56747736(-) A-I      intronic
chr12:56747693(-) A-I      intronic
chr12:56746298(-) A-I      intronic
chr12:56735931(-) A-I      3'UTR
chr12:56735997(-) A-I      3'UTR
chr12:56736335(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED STAT2
chr12:56745815(-) A-I intron -    22327324
chr12:56746830(-) A-I intron -    22327324
chr12:56746892(-) A-I intron -    22327324
chr12:56746906(-) A-I intron -    22327324
chr12:56747612(-) A-I intron -    22327324
chr12:56747704(-) A-I intron -    22327324
chr12:56746324(-) A-I intron -    21960545
chr12:56747045(-) A-I intron -    21960545
chr12:56747154(-) A-I intron -    21960545
chr12:56747167(-) A-I intron -    21960545
chr12:56736080(-) G-T exon 3'UTR    22484847
chr12:56736335(-) A-G exon 3'UTR    22484847
chr12:56741891(-) C-A intron -    22484847
chr12:56741892(-) T-A intron -    22484847
chr12:56745769(-) A-G intron -    22484847
chr12:56745774(-) A-G intron -    22484847
chr12:56745815(-) A-G intron -    22484847
chr12:56746365(-) A-G intron -    22484847
chr12:56746803(-) A-G intron -    22484847
chr12:56746830(-) A-G intron -    22484847
chr12:56746892(-) A-G intron -    22484847
chr12:56746906(-) A-G intron -    22484847
chr12:56746961(-) A-G intron -    22484847
chr12:56746962(-) A-G intron -    22484847
chr12:56746987(-) A-G intron -    22484847
chr12:56747561(-) A-G intron -    22484847
chr12:56747575(-) A-G intron -    22484847
chr12:56747612(-) A-G intron -    22484847
chr12:56747658(-) A-G intron -    22484847
chr12:56747680(-) A-G intron -    22484847
chr12:56747694(-) A-G intron -    22484847
chr12:56747704(-) A-G intron -    22484847
chr12:56753115(-) A-G intron -    22484847
chr12:56741238(-) T-C intron -    22484847
chr12:56743802(-) G-A intron -    22484847
chr12:56745745(-) A-G intron -    22484847
chr12:56745814(-) A-G intron -    22484847
chr12:56745962(-) A-G intron -    22484847
chr12:56746883(-) A-G intron -    22484847
chr12:56746884(-) A-G intron -    22484847
chr12:56746995(-) A-G intron -    22484847
chr12:56747573(-) A-G intron -    22484847
chr12:56747574(-) A-G intron -    22484847
chr12:56747586(-) A-G intron -    22484847
chr12:56747693(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase STAT2
chr12:56737169-56737170(-) m6A 3'UTR//exon       24284625
chr12:56737196-56737197(-) m6A CDS//exon       24284625//27773535
chr12:56737248-56737249(-) m6A CDS//exon       24284625//24981863//27773535//27371828//22608085
chr12:56737305-56737306(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr12:56737625-56737626(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr12:56737633-56737634(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr12:56737681-56737682(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr12:56737688-56737689(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr12:56737704-56737705(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//22608085
chr12:56737814-56737815(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//27773536
chr12:56737849-56737850(-) m6A CDS//exon       24284625//24981863//28052920//27371828//27773536
chr12:56737906-56737907(-) m6A CDS//exon       24284625//24981863//27773535//27371828
chr12:56739955-56739956(-) m6A CDS//exon       24284625//27773535//27371828
chr12:56743269-56743270(-) m6A CDS//exon       27773535
chr12:56743419-56743420(-) m6A CDS//exon       24284625//27773535
chr12:56743469-56743470(-) m6A exon//intron       27773535
chr12:56743484-56743485(-) m6A exon//intron       27773535
chr12:56744085-56744086(-) m6A exon//intron       24981863
chr12:56744113-56744114(-) m6A exon//intron       24981863
chr12:56744141-56744142(-) m6A exon//intron       24981863
chr12:56744659-56744660(-) m6A CDS//exon       27371828
chr12:56744885-56744886(-) m6A CDS//exon       27371828
chr12:56744909-56744910(-) m6A CDS//exon       27371828
chr12:56744936-56744937(-) m6A CDS//exon       27371828
chr12:56744957-56744958(-) m6A CDS//exon       27371828
chr12:56745036-56745037(-) m6A exon//intron       27773535//27371828
chr12:56745055-56745056(-) m6A exon//intron       27371828
chr12:56745123-56745124(-) m6A CDS//exon//intron       27371828
chr12:56745173-56745174(-) m6A CDS//exon//intron       27371828
chr12:56748253-56748254(-) m6A CDS//exon       27371828
chr12:56748263-56748264(-) m6A CDS//exon       27371828
chr12:56748574-56748575(-) m6A CDS//exon       27371828
chr12:56748579-56748580(-) m6A CDS//exon       27371828
chr12:56748590-56748591(-) m6A CDS//exon       27371828
chr12:56748617-56748618(-) m6A CDS//exon       27371828
chr12:56748628-56748629(-) m6A CDS//exon       27371828
chr12:56748641-56748642(-) m6A CDS//exon       27371828
chr12:56748671-56748672(-) m6A exon//intron       27371828
chr12:56748679-56748680(-) m6A exon//intron       27371828
chr12:56748705-56748706(-) m6A exon//intron       27371828
chr12:56748845-56748846(-) m6A exon//intron       -
chr12:56748874-56748875(-) m6A exon//intron       -
chr12:56748956-56748957(-) m6A exon//intron       -
chr12:56750227-56750228(-) m6A CDS//exon//intron       27371828
chr12:56750233-56750234(-) m6A CDS//exon//intron       27371828
chr12:56750266-56750267(-) m6A CDS//exon//intron       24981863//27371828
chr12:56753857-56753858(-) m6A 5'UTR//exon       24284625//24981863//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate STAT2
Chromatin K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-467-3p
Interactor2: STAT2

Evidence Support:


Weak-Evidence MiRNA microarray//RNA-Seq
Prediction-Evidence microRNA.org//PITA//Targetscan
Support Database ViRBase

References:


PMID 30605755 Target region None
Source ViRBase Interactor1 expression Downregulation
Tissue or cell line A549 cells Interactor2 expression Upregulation
Description A. Relationships between miRNAs and inversely correlated mRNAs involved in the influenza A pathway.

Starting a new search, please wait ...