Detail Information

Basic Information:


  VIRBase ID:  

HHID00092450

  Virus:  

Influenza A virus (A/swine/Guangxi/3861/2011(H1N1))

  Host:  

Homo sapiens

  Confidence Score:  

0.6743

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-467-3p OAS3
miRBase
Accession/Entrez ID		 hsa-miR-467-3p 4940
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - p100//p100OAS

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OAS3
chr12:113380327(+) A-I      intronic
chr12:113380328(+) A-I      intronic
chr12:113381000(+) A-I      intronic
chr12:113380333(+) A-I      intronic
chr12:113380365(+) A-I      intronic
chr12:113380929(+) A-I      intronic
chr12:113380417(+) A-I      intronic
chr12:113380762(+) A-I      intronic
chr12:113380369(+) A-I      intronic
chr12:113380518(+) A-I      intronic
chr12:113380889(+) A-I      intronic
chr12:113380412(+) A-I      intronic
chr12:113380366(+) A-I      intronic
chr12:113377315(+) A-I      intronic
chr12:113379077(+) A-I      intronic
chr12:113381619(+) A-I      intronic
chr12:113377205(+) A-I      intronic
chr12:113380334(+) A-I      intronic
chr12:113381758(+) A-I      intronic
chr12:113380349(+) A-I      intronic
chr12:113377360(+) A-I      intronic
chr12:113378870(+) A-I      intronic
chr12:113380844(+) A-I      intronic
chr12:113380969(+) A-I      intronic
chr12:113380949(+) A-I      intronic
chr12:113380501(+) A-I      intronic
chr12:113380823(+) A-I      intronic
chr12:113386202(+) A-I      intronic
chr12:113380330(+) A-I      intronic
chr12:113381745(+) A-I      intronic
chr12:113381658(+) A-I      intronic
chr12:113381772(+) A-I      intronic
chr12:113380238(+) A-I      intronic
chr12:113380841(+) A-I      intronic
chr12:113380858(+) A-I      intronic
chr12:113381707(+) A-I      intronic
chr12:113380326(+) A-I      intronic
chr12:113380761(+) A-I      intronic
chr12:113380921(+) A-I      intronic
chr12:113377422(+) A-I      intronic
chr12:113380937(+) A-I      intronic
chr12:113381008(+) A-I      intronic
chr12:113378991(+) A-I      intronic
chr12:113377402(+) A-I      intronic
chr12:113380368(+) A-I      intronic
chr12:113380892(+) A-I      intronic
chr12:113380388(+) A-I      intronic
chr12:113381133(+) A-I      intronic
chr12:113380385(+) A-I      intronic
chr12:113380840(+) A-I      intronic
chr12:113381014(+) A-I      intronic
chr12:113380845(+) A-I      intronic
chr12:113381379(+) A-I      intronic
chr12:113381378(+) A-I      intronic
chr12:113381389(+) A-I      intronic
chr12:113380350(+) A-I      intronic
chr12:113406188(+) A-I      intronic
chr12:113408811(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED OAS3
chr12:113377360(+) A-G intron -    22484847
chr12:113377402(+) A-G intron -    22484847
chr12:113380330(+) A-G intron -    22484847
chr12:113380949(+) A-G intron -    22484847
chr12:113377315(+) A-G intron -    22484847
chr12:113378870(+) A-G intron -    22484847
chr12:113379077(+) A-G intron -    22484847
chr12:113380238(+) A-G intron -    22484847
chr12:113380762(+) A-G intron -    22484847
chr12:113380823(+) A-G intron -    22484847
chr12:113380840(+) A-G intron -    22484847
chr12:113380841(+) A-G intron -    22484847
chr12:113380845(+) A-G intron -    22484847
chr12:113380858(+) A-G intron -    22484847
chr12:113380921(+) A-G intron -    22484847
chr12:113380928(+) T-C intron -    22484847
chr12:113380937(+) A-G intron -    22484847
chr12:113380948(+) T-C intron -    22484847
chr12:113380969(+) A-G intron -    22484847
chr12:113381619(+) A-G intron -    22484847
chr12:113381707(+) A-G intron -    22484847
chr12:113382876(+) A-G intron -    22484847
chr12:113386202(+) A-G intron -    22484847
chr12:113406562(+) C-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OAS3
chr12:113376172-113376173(+) m6A 5'UTR       24981863
chr12:113376178-113376179(+) m6A 5'UTR       24981863
chr12:113376215-113376216(+) m6A 5'UTR       24981863
chr12:113376222-113376223(+) m6A 5'UTR       24981863
chr12:113376229-113376230(+) m6A 5'UTR       24981863
chr12:113376275-113376276(+) m6A 5'UTR       24981863
chr12:113376339-113376340(+) m6A CDS       24981863
chr12:113376369-113376370(+) m6A CDS//exon       24981863
chr12:113376503-113376504(+) m6A CDS//exon       -
chr12:113379424-113379425(+) m6A CDS//intron       -
chr12:113379462-113379463(+) m6A CDS//intron       -
chr12:113379528-113379529(+) m6A CDS//intron       24209618//25456834//24981863//22575960
chr12:113379547-113379548(+) m6A CDS//intron       24209618//25456834//24981863//22575960
chr12:113379615-113379616(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960
chr12:113379672-113379673(+) m6A CDS//intron       24284625//24209618//25456834//24981863
chr12:113379707-113379708(+) m6A CDS//intron       24209618//25456834//24981863
chr12:113379717-113379718(+) m6A CDS//intron       24209618//25456834//24981863
chr12:113379796-113379797(+) m6A 3'UTR//intron       24209618//24981863
chr12:113379801-113379802(+) m6A 3'UTR//intron       24209618//24981863
chr12:113379810-113379811(+) m6A 3'UTR//intron       24209618//24981863
chr12:113379821-113379822(+) m6A 3'UTR//intron       24209618//24981863
chr12:113379835-113379836(+) m6A 3'UTR//intron       24209618//24981863
chr12:113379977-113379978(+) m6A 3'UTR//intron       24209618//24981863
chr12:113388576-113388577(+) m6A CDS//exon       24981863
chr12:113388585-113388586(+) m6A CDS//exon       24981863
chr12:113405793-113405794(+) m6A CDS       24981863
chr12:113405831-113405832(+) m6A CDS       24284625//24981863
chr12:113405911-113405912(+) m6A CDS       24284625
chr12:113405933-113405934(+) m6A CDS       24284625
chr12:113405938-113405939(+) m6A CDS       24284625
chr12:113405948-113405949(+) m6A CDS       24284625
chr12:113409095-113409096(+) m6A 3'UTR       24981863
chr12:113409100-113409101(+) m6A 3'UTR       24981863
chr12:113410501-113410502(+) m6A 3'UTR       24981863
chr12:113410635-113410636(+) m6A 3'UTR       24981863
chr12:113410647-113410648(+) m6A 3'UTR       24981863
chr12:113410841-113410842(+) m6A 3'UTR       27773535
chr12:113410905-113410906(+) m6A 3'UTR       24981863//27773535
chr12:113410929-113410930(+) m6A 3'UTR       24981863//27773535
chr12:113410937-113410938(+) m6A 3'UTR       24981863//27773535
chr12:113410993-113410994(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OAS3
Exosome Blood     -
Nucleus Colon cancer cells     24393600
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-467-3p
Interactor2: OAS3

Evidence Support:


Weak-Evidence MiRNA microarray//RNA-Seq
Prediction-Evidence microRNA.org//PITA//Targetscan
Support Database ViRBase

References:


PMID 30605755 Target region None
Source ViRBase Interactor1 expression Downregulation
Tissue or cell line A549 cells Interactor2 expression Upregulation
Description A. Relationships between miRNAs and inversely correlated mRNAs involved in the influenza A pathway.

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