Detail Information

Basic Information:


  VIRBase ID:  

HHID00092428

  Virus:  

Influenza A virus (A/Puerto Rico/8/1934(H1N1))

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-147b-3p:           ROCK2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-147b-3p ROCK2
miRBase
Accession/Entrez ID		 MIMAT0004928 9475
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ROCK-II

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-147b-3p
rs1200410442 chr15:45433107    A/T
rs752984903 chr15:45433111    C/T
rs754846973 chr15:45433098    G/T
rs757376786 chr15:45433118    T/C
rs1053956663 chr15:45433104    G/A
rs1262406913 chr15:45433103    CG/C
rs1347541319 chr15:45433102    G/A
rs376183261 chr15:45433101    T/G
rs753817843 chr15:45433103    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ROCK2
chr2:11411360(-) A-I      intronic
chr2:11321978(-) A-I      3'UTR
chr2:11321960(-) A-I      3'UTR
chr2:11321958(-) A-I      3'UTR
chr2:11425915(-) A-I      intronic
chr2:11425871(-) A-I      intronic
chr2:11321941(-) A-I      3'UTR
chr2:11328347(-) A-I      intronic
chr2:11328342(-) A-I      intronic
chr2:11411306(-) A-I      intronic
chr2:11411333(-) A-I      intronic
chr2:11411331(-) A-I      intronic
chr2:11411364(-) A-I      intronic
chr2:11411363(-) A-I      intronic
chr2:11411326(-) A-I      intronic
chr2:11434095(-) A-I      intronic
chr2:11409522(-) A-I      intronic
chr2:11411324(-) A-I      intronic
chr2:11411355(-) A-I      intronic
chr2:11411321(-) A-I      intronic
chr2:11411354(-) A-I      intronic
chr2:11411353(-) A-I      intronic
chr2:11411348(-) A-I      intronic
chr2:11411347(-) A-I      intronic
chr2:11411343(-) A-I      intronic
chr2:11411334(-) A-I      intronic
chr2:11321975(-) A-I      3'UTR
chr2:11411372(-) A-I      intronic
chr2:11478253(-) A-I      intronic
chr2:11425697(-) A-I      intronic
chr2:11425773(-) A-I      intronic
chr2:11425805(-) A-I      intronic
chr2:11425319(-) A-I      intronic
chr2:11425302(-) A-I      intronic
chr2:11425226(-) A-I      intronic
chr2:11425223(-) A-I      intronic
chr2:11422329(-) A-I      intronic
chr2:11422314(-) A-I      intronic
chr2:11434161(-) A-I      intronic
chr2:11435022(-) A-I      intronic
chr2:11435078(-) A-I      intronic
chr2:11435081(-) A-I      intronic
chr2:11435090(-) A-I      intronic
chr2:11422310(-) A-I      intronic
chr2:11422202(-) A-I      intronic
chr2:11435204(-) A-I      intronic
chr2:11408045(-) A-I      intronic
chr2:11409421(-) A-I      intronic
chr2:11409446(-) A-I      intronic
chr2:11409455(-) A-I      intronic
chr2:11409906(-) A-I      intronic
chr2:11409982(-) A-I      intronic
chr2:11415226(-) A-I      intronic
chr2:11415937(-) A-I      intronic
chr2:11418876(-) A-I      intronic
chr2:11418845(-) A-I      intronic
chr2:11418831(-) A-I      intronic
chr2:11418824(-) A-I      intronic
chr2:11418807(-) A-I      intronic
chr2:11435880(-) A-I      intronic
chr2:11389294(-) A-I      intronic
chr2:11388079(-) A-I      intronic
chr2:11384614(-) A-I      intronic
chr2:11378959(-) A-I      intronic
chr2:11372352(-) A-I      intronic
chr2:11360554(-) A-I      intronic
chr2:11346063(-) A-I      intronic
chr2:11360475(-) A-I      intronic
chr2:11360448(-) A-I      intronic
chr2:11360181(-) A-I      intronic
chr2:11359513(-) A-I      intronic
chr2:11359443(-) A-I      intronic
chr2:11359421(-) A-I      intronic
chr2:11352206(-) A-I      intronic
chr2:11352193(-) A-I      intronic
chr2:11352062(-) A-I      intronic
chr2:11346086(-) A-I      intronic
chr2:11346072(-) A-I      intronic
chr2:11478064(-) A-I      intronic
chr2:11441865(-) A-I      intronic
chr2:11329985(-) A-I      intronic
chr2:11328882(-) A-I      intronic
chr2:11467968(-) A-I      intronic
chr2:11325692(-) A-I      intronic
chr2:11325772(-) A-I      intronic
chr2:11360250(-) A-I      intronic
chr2:11328812(-) A-I      intronic
chr2:11328861(-) A-I      intronic
chr2:11328855(-) A-I      intronic
chr2:11328846(-) A-I      intronic
chr2:11476487(-) A-I      intronic
chr2:11477826(-) A-I      intronic
chr2:11477927(-) A-I      intronic
chr2:11328373(-) A-I      intronic
chr2:11425876(-) A-I      intronic
chr2:11328515(-) A-I      intronic
chr2:11328509(-) A-I      intronic
chr2:11328429(-) A-I      intronic
chr2:11476508(-) A-I      intronic
chr2:11330077(-) A-I      intronic
chr2:11464433(-) A-I      intronic
chr2:11328487(-) A-I      intronic
chr2:11328400(-) A-I      intronic
chr2:11389186(-) A-I      intronic
chr2:11328482(-) A-I      intronic
chr2:11359389(-) A-I      intronic
chr2:11329925(-) A-I      intronic
chr2:11418967(-) A-I      intronic
chr2:11407936(-) A-I      intronic
chr2:11345991(-) A-I      intronic
chr2:11422355(-) A-I      intronic
chr2:11328309(-) A-I      intronic
chr2:11425796(-) A-I      intronic
chr2:11330023(-) A-I      intronic
chr2:11425947(-) A-I      intronic
chr2:11329141(-) A-I      intronic
chr2:11359829(-) A-I      intronic
chr2:11415963(-) A-I      intronic
chr2:11328374(-) A-I      intronic
chr2:11418963(-) A-I      intronic
chr2:11330045(-) A-I      intronic
chr2:11412952(-) A-I      intronic
chr2:11329040(-) A-I      intronic
chr2:11328449(-) A-I      intronic
chr2:11328297(-) A-I      intronic
chr2:11328455(-) A-I      intronic
chr2:11360281(-) A-I      intronic
chr2:11360343(-) A-I      intronic
chr2:11419031(-) A-I      intronic
chr2:11410159(-) A-I      intronic
chr2:11412755(-) A-I      intronic
chr2:11328437(-) A-I      intronic
chr2:11419012(-) A-I      intronic
chr2:11478413(-) A-I      intronic
chr2:11328304(-) A-I      intronic
chr2:11442127(-) A-I      intronic
chr2:11329079(-) A-I      intronic
chr2:11321776(-) A-I      3'UTR
chr2:11325795(-) A-I      intronic
chr2:11425870(-) A-I      intronic
chr2:11423136(-) A-I      intronic
chr2:11442140(-) A-I      intronic
chr2:11330115(-) A-I      intronic
chr2:11360075(-) A-I      intronic
chr2:11360272(-) A-I      intronic
chr2:11461593(-) A-I      intronic
chr2:11360213(-) A-I      intronic
chr2:11425810(-) A-I      intronic
chr2:11442544(-) A-I      intronic
chr2:11387985(-) A-I      intronic
chr2:11412874(-) A-I      intronic
chr2:11410079(-) A-I      intronic
chr2:11388723(-) A-I      intronic
chr2:11388752(-) A-I      intronic
chr2:11467827(-) A-I      intronic
chr2:11442069(-) A-I      intronic
chr2:11389227(-) A-I      intronic
chr2:11477972(-) A-I      intronic
chr2:11415999(-) A-I      intronic
chr2:11325650(-) A-I      intronic
chr2:11329093(-) A-I      intronic
chr2:11418916(-) A-I      intronic
chr2:11345987(-) A-I      intronic
chr2:11412814(-) A-I      intronic
chr2:11373283(-) A-I      intronic
chr2:11352218(-) A-I      intronic
chr2:11388687(-) A-I      intronic
chr2:11329857(-) A-I      intronic
chr2:11478466(-) A-I      intronic
chr2:11442070(-) A-I      intronic
chr2:11442169(-) A-I      intronic
chr2:11359515(-) A-I      intronic
chr2:11329941(-) A-I      intronic
chr2:11435187(-) A-I      intronic
chr2:11325651(-) A-I      intronic
chr2:11477924(-) A-I      intronic
chr2:11418922(-) A-I      intronic
chr2:11425853(-) A-I      intronic
chr2:11388599(-) A-I      intronic
chr2:11329080(-) A-I      intronic
chr2:11346194(-) A-I      intronic
chr2:11435052(-) A-I      intronic
chr2:11352322(-) A-I      intronic
chr2:11477870(-) A-I      intronic
chr2:11384802(-) A-I      intronic
chr2:11425791(-) A-I      intronic
chr2:11425770(-) A-I      intronic
chr2:11477247(-) A-I      intronic
chr2:11442572(-) A-I      intronic
chr2:11329086(-) A-I      intronic
chr2:11330082(-) A-I      intronic
chr2:11372486(-) A-I      intronic
chr2:11325874(-) A-I      intronic
chr2:11360362(-) A-I      intronic
chr2:11476620(-) A-I      intronic
chr2:11477892(-) A-I      intronic
chr2:11425349(-) A-I      intronic
chr2:11342903(-) A-I      intronic
chr2:11389197(-) A-I      intronic
chr2:11412788(-) A-I      intronic
chr2:11410015(-) A-I      intronic
chr2:11329149(-) A-I      intronic
chr2:11478267(-) A-I      intronic
chr2:11360249(-) A-I      intronic
chr2:11328279(-) A-I      intronic
chr2:11415217(-) A-I      intronic
chr2:11328888(-) A-I      intronic
chr2:11434028(-) A-I      intronic
chr2:11330018(-) A-I      intronic
chr2:11329137(-) A-I      intronic
chr2:11435068(-) A-I      intronic
chr2:11329062(-) A-I      intronic
chr2:11388713(-) A-I      intronic
chr2:11442562(-) A-I      intronic
chr2:11415261(-) A-I      intronic
chr2:11467888(-) A-I      intronic
chr2:11425694(-) A-I      intronic
chr2:11425877(-) A-I      intronic
chr2:11389176(-) A-I      intronic
chr2:11447708(-) A-I      intronic
chr2:11388065(-) A-I      intronic
chr2:11409580(-) A-I      intronic
chr2:11384800(-) A-I      intronic
chr2:11335916(-) A-I      intronic
chr2:11477249(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ROCK2
chr2:11323239(-) A-I exon 3'UTR    19478186
chr2:11397668(-) A-I intron -    22327324
chr2:11328279(-) A-I intron -    22028664
chr2:11328297(-) A-I intron -    22028664
chr2:11328304(-) A-I intron -    22028664
chr2:11328309(-) A-I intron -    22028664
chr2:11328310(-) A-I intron -    22028664
chr2:11328373(-) A-I intron -    22028664
chr2:11328374(-) A-I intron -    22028664
chr2:11328400(-) A-I intron -    22028664
chr2:11328429(-) A-I intron -    22028664
chr2:11328437(-) A-I intron -    22028664
chr2:11328449(-) A-I intron -    22028664
chr2:11328455(-) A-I intron -    22028664
chr2:11328482(-) A-I intron -    22028664
chr2:11328487(-) A-I intron -    22028664
chr2:11328509(-) A-I intron -    22028664
chr2:11328515(-) A-I intron -    22028664
chr2:11329086(-) A-G intron -    22484847
chr2:11329137(-) A-G intron -    22484847
chr2:11329925(-) A-G intron -    22484847
chr2:11329991(-) A-G intron -    22484847
chr2:11329995(-) A-G intron -    22484847
chr2:11330071(-) A-G intron -    22484847
chr2:11330107(-) A-G intron -    22484847
chr2:11330115(-) A-G intron -    22484847
chr2:11359389(-) A-G intron -    22484847
chr2:11389159(-) A-G intron -    22484847
chr2:11389176(-) A-G intron -    22484847
chr2:11389186(-) A-G intron -    22484847
chr2:11389197(-) A-G intron -    22484847
chr2:11389227(-) A-G intron -    22484847
chr2:11412755(-) A-G intron -    22484847
chr2:11412788(-) A-G intron -    22484847
chr2:11415217(-) A-G intron -    22484847
chr2:11415261(-) A-G intron -    22484847
chr2:11418963(-) A-G intron -    22484847
chr2:11418967(-) A-G intron -    22484847
chr2:11425266(-) A-G intron -    22484847
chr2:11425349(-) A-G intron -    22484847
chr2:11442069(-) A-G intron -    22484847
chr2:11442070(-) A-G intron -    22484847
chr2:11442127(-) A-G intron -    22484847
chr2:11442140(-) A-G intron -    22484847
chr2:11442544(-) A-G intron -    22484847
chr2:11442562(-) A-G intron -    22484847
chr2:11447708(-) A-G intron -    22484847
chr2:11477247(-) A-G intron -    22484847
chr2:11477924(-) A-G intron -    22484847
chr2:11478267(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ROCK2
chr2:11319898-11319899(-) m6A 3'UTR       27773535
chr2:11320056-11320057(-) m6A 3'UTR       24284625//27773535
chr2:11320163-11320164(-) m6A 3'UTR       24284625
chr2:11320185-11320186(-) m6A 3'UTR       24284625
chr2:11320315-11320316(-) m6A 3'UTR       24284625//24981863//22575960//22608085
chr2:11320337-11320338(-) m6A 3'UTR       24284625//24981863//22575960//22608085
chr2:11320343-11320344(-) m6A 3'UTR       24284625//24981863//22575960//22608085
chr2:11320434-11320435(-) m6A 3'UTR       24284625//24981863
chr2:11321297-11321298(-) m6A 3'UTR       27773535
chr2:11323047-11323048(-) m6A 3'UTR       26404942//27773535
chr2:11323106-11323107(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr2:11323236-11323237(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:11323315-11323316(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr2:11323341-11323342(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:11323363-11323364(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:11323451-11323452(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:11323502-11323503(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:11323507-11323508(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:11332278-11332279(-) m6A CDS       24284625//24209618//24981863//27773535//22575960
chr2:11332282-11332283(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr2:11332321-11332322(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr2:11332343-11332344(-) m6A CDS       24284625//24209618//26404942//27773535
chr2:11332369-11332370(-) m6A CDS       24284625//27773535
chr2:11332745-11332746(-) m6A CDS       26404942
chr2:11332802-11332803(-) m6A CDS//exon       24981863//26404942//27773535
chr2:11333951-11333952(-) m6A CDS//exon       24981863//27773535//22575960
chr2:11334413-11334414(-) m6A CDS//exon       26404942
chr2:11334425-11334426(-) m6A CDS//exon       26404942
chr2:11335111-11335112(-) m6A CDS//exon       26404942
chr2:11337415-11337416(-) m6A CDS       24981863//26404942//27773535
chr2:11337424-11337425(-) m6A CDS       24981863//26404942//27773535//22575960
chr2:11337441-11337442(-) m6A CDS       24981863//26404942//27773535//22575960
chr2:11337669-11337670(-) m6A CDS       24981863//26404942//27773535//22575960
chr2:11337792-11337793(-) m6A CDS       24981863//27773535//22575960
chr2:11338621-11338622(-) m6A CDS       24981863//27773535//22575960
chr2:11338630-11338631(-) m6A CDS       24981863//27773535//22575960
chr2:11338881-11338882(-) m6A CDS       24981863//27773535//22575960
chr2:11338890-11338891(-) m6A CDS       24981863//27773535//22575960
chr2:11341112-11341113(-) m6A CDS       24981863//27773535//22575960
chr2:11341118-11341119(-) m6A CDS       24981863//27773535//22575960
chr2:11341124-11341125(-) m6A CDS       24981863//27773535//22575960
chr2:11341165-11341166(-) Am CDS       -
chr2:11341190-11341191(-) m6A CDS       24981863//27773535
chr2:11341266-11341267(-) m6A CDS       24981863//27773535
chr2:11341455-11341456(-) m6A CDS       24981863//27773535
chr2:11341482-11341483(-) m6A CDS       24981863//27773535//22575960
chr2:11341487-11341488(-) m6A CDS       24981863//27773535//22575960
chr2:11341526-11341527(-) m6A CDS       24981863//27773535//22575960
chr2:11342189-11342190(-) m6A CDS       24981863//27773535//22575960
chr2:11347859-11347860(-) m6A CDS       24981863//27773535//22575960
chr2:11347871-11347872(-) m6A CDS       24981863//27773535//22575960
chr2:11347881-11347882(-) m6A CDS       24981863//27773535//22575960
chr2:11347960-11347961(-) m6A CDS       24981863//27773535//22608085
chr2:11348002-11348003(-) m6A CDS       24981863//27773535//22608085
chr2:11348028-11348029(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11348436-11348437(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11348469-11348470(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11348482-11348483(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11348521-11348522(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11348535-11348536(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11348543-11348544(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:11351888-11351889(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr2:11351903-11351904(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr2:11354515-11354516(-) m6A 5'UTR//CDS       24981863//27773535//22575960//22608085
chr2:11354527-11354528(-) m6A 5'UTR//CDS       24981863//27773535//22575960//22608085
chr2:11354998-11354999(-) m6A 5'UTR//CDS       24981863//27773535
chr2:11355056-11355057(-) m6A 5'UTR//CDS       24981863//27773535
chr2:11355070-11355071(-) m6A 5'UTR//CDS       24981863//27773535
chr2:11355084-11355085(-) m6A 5'UTR//CDS       24981863//27773535
chr2:11355131-11355132(-) m6A 5'UTR//CDS       24981863
chr2:11355151-11355152(-) m6A 5'UTR//CDS       24981863
chr2:11355184-11355185(-) m6A 5'UTR//CDS       24981863
chr2:11355202-11355203(-) m6A 5'UTR//CDS       24981863
chr2:11355449-11355450(-) m6A 5'UTR//CDS       24981863
chr2:11355489-11355490(-) m6A 3'UTR//5'UTR//CDS       24981863
chr2:11355661-11355662(-) m6A 3'UTR//5'UTR//CDS       24981863
chr2:11355735-11355736(-) m6A 3'UTR//5'UTR//CDS       24981863//22575960
chr2:11356306-11356307(-) m6A 3'UTR//5'UTR//CDS       24981863//22575960
chr2:11357226-11357227(-) m6A 3'UTR//5'UTR//CDS       24981863//22575960
chr2:11357232-11357233(-) m6A 3'UTR//5'UTR//CDS       24981863//22575960
chr2:11357265-11357266(-) m6A 3'UTR//5'UTR//CDS       24981863//22575960
chr2:11357283-11357284(-) m6A 3'UTR//5'UTR//CDS       24981863//22575960
chr2:11367490-11367491(-) m6A 5'UTR//CDS       22575960
chr2:11484155-11484156(-) m6A 5'UTR//CDS//intron       27773536
chr2:11484216-11484217(-) m6A 5'UTR//CDS//intron       24209618//27371828//27773536
chr2:11484304-11484305(-) m6A 5'UTR//intron       24284625//24209618//27371828//27773536//22575960
chr2:11484399-11484400(-) m6A 5'UTR//intron       24284625//24209618//27371828//27773536//22575960
chr2:11484411-11484412(-) m6A 5'UTR//intron       24284625//24209618//27371828//27773536//22575960
chr2:11484536-11484537(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536//22575960//22608085
chr2:11484544-11484545(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536//22575960//22608085
chr2:11484567-11484568(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536//22575960//22608085
chr2:11488322-11488323(-) m6A exon       24209618//24981863//27371828//27773536//22575960
chr2:11488340-11488341(-) m6A exon       24209618//24981863//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-147b-3p
Exosome Plasma     23663360
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
ROCK2
Chromatin HCC cell line (HepG2)|K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-147b-3p
Interactor2: ROCK2

Evidence Support:


Weak-Evidence MiRNA microarray
Prediction-Evidence microRNA.org//PITA//Targetscan
Support Database ViRBase

References:


PMID 29059211 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line HUVECs Interactor2 expression None
Description The differential miRNAs and their target genes in the above pathways were concluded in Table S1 and Table S2.

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