Basic Information:

  VIRBase ID:  

HHID00092418

  Virus:  

Influenza A virus (A/Puerto Rico/8/1934(H1N1))

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-214-5p:  MIMAT0004564          RASSF5:  NM_182663     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-214-5p	RASSF5
miRBase Accession/Entrez ID	MIMAT0004564	83593
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	Maxp1//NORE1//NORE1A//NORE1B//RAPL//RASSF3

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-214-5p	rs747554459 chr1:172138858    C/T rs748757777 chr1:172138868    G/A rs768291010 chr1:172138869    T/C rs779765684 chr1:172138867    T/C rs1206615501 chr1:172138871    G/A rs1266122414 chr1:172138876    G/A rs1322177954 chr1:172138872    A/G rs755676659 chr1:172138865    A/C rs755676659 chr1:172138865    A/G

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RASSF5	chr1:206689929(+) A-I      intronic chr1:206690551(+) A-I      intronic chr1:206690552(+) A-I      intronic chr1:206736114(+) A-I      intronic chr1:206735288(+) A-I      intronic chr1:206736118(+) A-I      intronic chr1:206735123(+) A-I      intronic chr1:206690606(+) A-I      intronic chr1:206736139(+) A-I      intronic chr1:206735098(+) A-I      intronic chr1:206735094(+) A-I      intronic chr1:206735093(+) A-I      intronic chr1:206720389(+) A-I      intronic chr1:206751560(+) A-I      intronic chr1:206736083(+) A-I      intronic chr1:206716424(+) A-I      intronic chr1:206689809(+) A-I      intronic chr1:206735270(+) A-I      intronic chr1:206715756(+) A-I      intronic chr1:206736130(+) A-I      intronic chr1:206735087(+) A-I      intronic chr1:206716465(+) A-I      intronic chr1:206716430(+) A-I      intronic chr1:206735068(+) A-I      intronic chr1:206715885(+) A-I      intronic chr1:206715819(+) A-I      intronic chr1:206751296(+) A-I      intronic chr1:206751319(+) A-I      intronic chr1:206715781(+) A-I      intronic chr1:206708402(+) A-I      intronic chr1:206748304(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RASSF5	chr1:206715756(+) A-I intron -    15342557 chr1:206715781(+) A-I intron -    15342557 chr1:206715819(+) A-I intron -    15342557 chr1:206715885(+) A-I intron -    15342557 chr1:206716430(+) A-I intron -    15342557 chr1:206735068(+) A-G intron -    22484847 chr1:206735087(+) A-G intron -    22484847 chr1:206736130(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RASSF5	chr1:206681204-206681205(+) m6A CDS       22575960 chr1:206730494-206730495(+) m6A 5'UTR//intron       - chr1:206730590-206730591(+) m6A 5'UTR//intron       24981863//27371828 chr1:206730597-206730598(+) m6A 5'UTR//intron       24981863//27371828 chr1:206730674-206730675(+) m6A 5'UTR//intron       27371828 chr1:206730889-206730890(+) m6A 5'UTR//exon//intron       - chr1:206730911-206730912(+) m6A CDS//exon//intron       - chr1:206730951-206730952(+) m6A CDS//exon//intron       - chr1:206730959-206730960(+) m6A CDS//exon//intron       - chr1:206730979-206730980(+) m6A CDS//exon//intron       - chr1:206731008-206731009(+) m6A CDS//exon//intron       - chr1:206756611-206756612(+) m6A CDS//exon       - chr1:206756624-206756625(+) m6A CDS//exon       - chr1:206756691-206756692(+) m6A CDS//exon       - chr1:206757859-206757860(+) m6A CDS//exon       26404942 chr1:206757965-206757966(+) m6A CDS//exon       26404942 chr1:206760180-206760181(+) m6A 3'UTR//CDS//exon       22608085 chr1:206760188-206760189(+) m6A 3'UTR//CDS//exon       22608085 chr1:206760221-206760222(+) m6A 3'UTR//CDS//exon       24981863//26404942//22608085 chr1:206760267-206760268(+) m6A 3'UTR//CDS//exon       24981863//26404942//22575960//22608085 chr1:206760300-206760301(+) m6A 3'UTR//CDS//exon       24981863//26404942//22575960//22608085 chr1:206760379-206760380(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085 chr1:206760394-206760395(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085 chr1:206760460-206760461(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:206760535-206760536(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:206760546-206760547(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:206760617-206760618(+) m6A 3'UTR//exon       24209618//24981863//26404942//22575960//22608085 chr1:206760623-206760624(+) m6A 3'UTR//exon       24209618//24981863//26404942//22575960//22608085 chr1:206760725-206760726(+) m6A 3'UTR//exon       24209618//26404942//22575960//22608085 chr1:206760812-206760813(+) m6A 3'UTR//exon       24981863//26404942//22575960 chr1:206760988-206760989(+) m6A 3'UTR//exon       26404942 chr1:206761043-206761044(+) m6A 3'UTR//exon       26404942 chr1:206761161-206761162(+) m6A 3'UTR//exon       24981863//26404942 chr1:206761541-206761542(+) m6A 3'UTR//exon       26404942 chr1:206761562-206761563(+) m6A 3'UTR//exon       26404942 chr1:206761607-206761608(+) m6A 3'UTR//exon       26404942 chr1:206761658-206761659(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr1:206761765-206761766(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr1:206761774-206761775(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr1:206761798-206761799(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr1:206761847-206761848(+) m6A 3'UTR//exon       24981863//26404942 chr1:206762000-206762001(+) m6A 3'UTR//exon       24981863//26404942 chr1:206762062-206762063(+) m6A 3'UTR//exon       24981863//26404942 chr1:206762071-206762072(+) m6A 3'UTR//exon       24981863//26404942 chr1:206762122-206762123(+) m6A 3'UTR//exon       26404942 chr1:206762369-206762370(+) m6A 3'UTR//exon       26404942 chr1:206762378-206762379(+) m6A 3'UTR//exon       26404942 chr1:206762399-206762400(+) m6A 3'UTR//exon       26404942 chr1:206762424-206762425(+) m6A 3'UTR//exon       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-214-5p	Exosome Plasma     23663360 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Fibroblasts|Mesenchymal stem cells     -
	RASSF5	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-214-5p
Interactor2: RASSF5

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	DIANA
Support Database	ViRBase

References:

PMID	31985023	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	None	Interactor2 expression	None
Description	In the predication analysis, NEAT1 targeted 144 mRNAs through miRNAs (Table III).