Basic Information:

  VIRBase ID:  

HHID00092416

  Virus:  

Influenza A virus (A/Puerto Rico/8/1934(H1N1))

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-214-5p:  MIMAT0004564          CDK3:  NM_001258     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-214-5p	CDK3
miRBase Accession/Entrez ID	MIMAT0004564	1018
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-214-5p	rs747554459 chr1:172138858    C/T rs748757777 chr1:172138868    G/A rs768291010 chr1:172138869    T/C rs779765684 chr1:172138867    T/C rs1206615501 chr1:172138871    G/A rs1266122414 chr1:172138876    G/A rs1322177954 chr1:172138872    A/G rs755676659 chr1:172138865    A/C rs755676659 chr1:172138865    A/G

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CDK3	chr17:73998986(+) A-I      intronic chr17:74000549(+) A-I      intronic chr17:73998920(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CDK3	chr17:73997022-73997023(+) m6A 5'UTR       25456834//22608085 chr17:73997245-73997246(+) m6A intron       25456834 chr17:73997573-73997574(+) m6A CDS       - chr17:73997581-73997582(+) m6A CDS       - chr17:73997605-73997606(+) m1A CDS       26863196 chr17:73997613-73997614(+) m6A CDS       - chr17:73999468-73999469(+) m6A CDS       24284625 chr17:74001420-74001421(+) m6A CDS       24284625 chr17:74001838-74001839(+) m6A 3'UTR       - chr17:74001925-74001926(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-214-5p	Exosome Plasma     23663360 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Fibroblasts|Mesenchymal stem cells     -
	CDK3	Cytosol K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-214-5p
Interactor2: CDK3

Evidence Support:

Weak-Evidence	RNA-Seq
Prediction-Evidence	DIANA
Support Database	ViRBase

References:

PMID	31985023	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	None	Interactor2 expression	None
Description	In the predication analysis, NEAT1 targeted 144 mRNAs through miRNAs (Table III).