Detail Information
Interactor1 | Interactor2 | |
---|---|---|
Symbol | ssc-miR-196b-5p | LRRC40 |
miRBase Accession/Entrez ID |
MIMAT0013923 | 100515841 |
Organism | Sus scrofa | Sus scrofa |
Category | miRNA | mRNA |
Alias | - | - |
Interactor1: ssc-miR-196b-5p | Interactor2: LRRC40 |
---|
Weak-Evidence | MiRNA sequencing | |
---|---|---|
Prediction-Evidence | miRanda//Targetscan | |
Support Database | ViRBase |
PMID | 26943793 | Target region | 3'UTR |
---|---|---|---|
Source | ViRBase | Interactor1 expression | Upregulation |
Tissue or cell line | porcine macrophages | Interactor2 expression | None |
Description | The database microT-CDS (http://diana.imis.athena-innovation.gr/DianaTools/index.php r=microT_CDS/index), the positional relationships between miRNAs, and genomic annotation sets were used for the prediction of targets of the 130 DE miRNAs.To explore the regulatory roles of the DE miRNAs from this study, web prediction programs were used to predict their putative target genes (S3 Table). |