Basic Information:
VIRBase ID:
HHID00082702
Virus:
Suid betaherpesvirus 2
Host:
Sus scrofa
Confidence Score:
0.5908
Interaction Type:
Host-Host interaction
RNA Localization:
Resource |
Symbol |
Subcellular Localization |
Tissue or Cell Line |
PMID |
RNALocate |
ssc-miR-18a |
|
Interaction Network (The top 100 interactions):
Evidence Support:
Weak-Evidence |
MiRNA sequencing |
Prediction-Evidence |
miRanda//Targetscan |
Support Database |
ViRBase
|
References:
PMID |
26943793 |
Target region |
3'UTR |
Source |
ViRBase
|
Interactor1 expression |
Downregulation |
Tissue or cell line |
porcine macrophages |
Interactor2 expression |
None |
Description |
The database microT-CDS (http://diana.imis.athena-innovation.gr/DianaTools/index.php r=microT_CDS/index), the positional relationships between miRNAs, and genomic annotation sets were used for the prediction of targets of the 130 DE miRNAs.To explore the regulatory roles of the DE miRNAs from this study, web prediction programs were used to predict their putative target genes (S3 Table). |