Basic Information:

  VIRBase ID:  

HHID00076384

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.5711

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      mmu-miR-199a-3p:  MIMAT0000230          Rras2:  NM_025846     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mmu-miR-199a-3p	Rras2
miRBase Accession/Entrez ID	MIMAT0000230	66922
Organism	Mus musculus	Mus musculus
Category	miRNA	mRNA
Alias	-	2610016H24Rik//C86394//TC21

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rras2	chr7:114047384-114047385(-) m6A 3'UTR       24981863 chr7:114047482-114047483(-) m6A 3'UTR       25456834//24981863 chr7:114047511-114047512(-) m6A 3'UTR       25456834//24981863 chr7:114047580-114047581(-) m6A 3'UTR       25456834//24981863 chr7:114047656-114047657(-) m6A 3'UTR       24981863//25569111 chr7:114047665-114047666(-) m6A 3'UTR       24981863//25569111 chr7:114047724-114047725(-) m6A 3'UTR       25569111 chr7:114047891-114047892(-) m6A 3'UTR       25412662//24981863//25569111 chr7:114047943-114047944(-) m6A 3'UTR       25412662//24981863//25569111//26404942 chr7:114047982-114047983(-) m6A 3'UTR       25412662//24981863//25569111//26404942 chr7:114047997-114047998(-) m6A 3'UTR       25412662//24981863//25569111//26404942 chr7:114048076-114048077(-) m6A 3'UTR       24981863//25569111 chr7:114048194-114048195(-) m6A 3'UTR//CDS       24981863 chr7:114048214-114048215(-) m6A 3'UTR//CDS       24981863 chr7:114050317-114050318(-) m6A 3'UTR//CDS       24981863 chr7:114050333-114050334(-) m6A 3'UTR//CDS       24981863 chr7:114050443-114050444(-) m6A 3'UTR//intron       24981863 chr7:114050524-114050525(-) m6A 3'UTR//intron       24981863 chr7:114051656-114051657(-) m6A 3'UTR//intron       24981863 chr7:114051683-114051684(-) m6A 3'UTR//intron       24981863 chr7:114058542-114058543(-) m6A CDS       24981863 chr7:114058552-114058553(-) m6A CDS       24981863 chr7:114058600-114058601(-) m6A CDS       24981863 chr7:114058620-114058621(-) m6A CDS       24981863 chr7:114117600-114117601(-) m6A 5'UTR       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	mmu-miR-199a-3p	Exosome Conditioned medium of E13 SMG     28041903 Exosome B6 BMDCs     22031862

Interaction Network (The top 100 interactions):

Interactor1: mmu-miR-199a-3p
Interactor2: Rras2

Evidence Support:

Weak-Evidence	MiRNA microarray
Prediction-Evidence	Targetscan
Support Database	ViRBase

References:

PMID	20643939	Target region	None
Source	ViRBase	Interactor1 expression	Upregulation
Tissue or cell line	NIH3T3 cells	Interactor2 expression	Downregulation
Description	All of the regulated genes in Fig. 5B are down-regulated by miR-199a-3p mimic and up-regulated by miR-199a-3p inhibitor compared with the negative transfection control, with the exception of ITGA6, which is only up-regulated by the inhibitor (Dataset S3).