Basic Information:
VIRBase ID: HHID00076136
Virus: Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)
Host: Homo sapiens
Confidence Score: 0.4752
Interaction Type: Host-Host interaction
Predicted Binding:
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Interactor Information:
Interactor1
Interactor2
Symbol
hsa-miR-155-5p
SPI1
miRBase Accession/Entrez ID
MIMAT0000646
6688
Organism
Homo sapiens
Homo sapiens
Category
miRNA
mRNA
Alias
-
OF//PU.1//SFPI1//SPI-1//SPI-A
ncRNA SNP information:
Resource
Symbol
SNP ID
SNP Position
Ref/Alt
miRNASNP-v3
hsa-miR-155-5p
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
SPI1
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
SPI1
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
hsa-miR-155-5p
SPI1
Related Drug Information:
Resource
Symbol
Drug Name
PubChem ID
Function
ncDR
hsa-miR-155-5p
Resource
Symbol
Drug Name
PubChem ID
Function
Link
RNAInter
hsa-miR-155-5p
Resource
Symbol
Drug Name
PubChem ID
PMID
NoncoRNA
hsa-miR-155-5p
Interaction Network (The top 100 interactions) :
Interactor1: hsa-miR-155-5p
Interactor2: SPI1
Evidence Support:
Weak-Evidence
Microarray
Support Database
ViRBase
References:
PMID
18075594
Target region
3'UTR
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
BJAB cells
Interactor2 expression
Downregulation
Description
Using gene set enrichment analysis(19), we observed that computer-predicted targets for cellular miR-155 were significantly enriched in mRNAs downregulated by miR-K12-11 (false discovery rate ≤ 0.003; Suppl. Table 2).