Basic Information:

  VIRBase ID:  

HHID00076075

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-101-2-5p:  MIMAT0037312          HVCN1:  NM_001040107     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-101-2-5p	HVCN1
miRBase Accession/Entrez ID	MIMAT0037312	84329
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	HV1//VSOP

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-101-2-5p	rs1189997653 chr9:4850323    C/G rs1411860402 chr9:4850328    G/C rs1472339708 chr9:4850325    G/A rs374692878 chr9:4850308    T/C rs752365347 chr9:4850320    G/C rs758036961 chr9:4850324    C/T rs777507775 chr9:4850326    A/G rs570832031 chr9:4850310    G/A rs570832031 chr9:4850310    G/T rs766953168 chr9:4850309    C/T rs779213487 chr9:4850315    T/C rs894878476 chr9:4850314    A/G

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HVCN1	chr12:111100388(-) A-I      NonSyn:Tyr->Cys chr12:111116321(-) A-I      intronic chr12:111116322(-) A-I      intronic chr12:111116428(-) A-I      intronic chr12:111116430(-) A-I      intronic chr12:111116470(-) A-I      intronic chr12:111120693(-) A-I      intronic chr12:111120723(-) A-I      intronic chr12:111107616(-) A-I      intronic chr12:111105103(-) A-I      intronic chr12:111105409(-) A-I      intronic chr12:111091196(-) A-I      intronic chr12:111090090(-) A-I      intronic chr12:111116461(-) A-I      intronic chr12:111116433(-) A-I      intronic chr12:111115004(-) A-I      intronic chr12:111103748(-) A-I      intronic chr12:111109010(-) A-I      intronic chr12:111114972(-) A-I      intronic chr12:111114928(-) A-I      intronic chr12:111114835(-) A-I      intronic chr12:111114797(-) A-I      intronic chr12:111113705(-) A-I      intronic chr12:111113606(-) A-I      intronic chr12:111104116(-) A-I      intronic chr12:111113605(-) A-I      intronic chr12:111113020(-) A-I      intronic chr12:111087823(-) A-I      intronic chr12:111109118(-) A-I      intronic chr12:111109112(-) A-I      intronic chr12:111109055(-) A-I      intronic chr12:111109004(-) A-I      intronic chr12:111108984(-) A-I      intronic chr12:111108753(-) A-I      intronic chr12:111120186(-) A-I      intronic chr12:111108740(-) A-I      intronic chr12:111107807(-) A-I      intronic chr12:111107783(-) A-I      intronic chr12:111105002(-) A-I      intronic chr12:111107617(-) A-I      intronic chr12:111106253(-) A-I      intronic chr12:111106234(-) A-I      intronic chr12:111106224(-) A-I      intronic chr12:111106089(-) A-I      intronic chr12:111105910(-) A-I      intronic chr12:111105509(-) A-I      intronic chr12:111105504(-) A-I      intronic chr12:111105414(-) A-I      intronic chr12:111105404(-) A-I      intronic chr12:111107739(-) A-I      intronic chr12:111105332(-) A-I      intronic chr12:111105288(-) A-I      intronic chr12:111105230(-) A-I      intronic chr12:111105143(-) A-I      intronic chr12:111105118(-) A-I      intronic chr12:111105116(-) A-I      intronic chr12:111105115(-) A-I      intronic chr12:111105099(-) A-I      intronic chr12:111104969(-) A-I      intronic chr12:111104190(-) A-I      intronic chr12:111104184(-) A-I      intronic chr12:111103314(-) A-I      intronic chr12:111103274(-) A-I      intronic chr12:111103261(-) A-I      intronic chr12:111103237(-) A-I      intronic chr12:111103213(-) A-I      intronic chr12:111103160(-) A-I      intronic chr12:111103141(-) A-I      intronic chr12:111102014(-) A-I      intronic chr12:111101938(-) A-I      intronic chr12:111101926(-) A-I      intronic chr12:111109088(-) A-I      intronic chr12:111101815(-) A-I      intronic chr12:111101293(-) A-I      intronic chr12:111101204(-) A-I      intronic chr12:111095191(-) A-I      intronic chr12:111095181(-) A-I      intronic chr12:111093737(-) A-I      intronic chr12:111093734(-) A-I      intronic chr12:111095136(-) A-I      intronic chr12:111093666(-) A-I      intronic chr12:111120756(-) A-I      intronic chr12:111093658(-) A-I      intronic chr12:111093647(-) A-I      intronic chr12:111093642(-) A-I      intronic chr12:111117509(-) A-I      intronic chr12:111093638(-) A-I      intronic chr12:111093606(-) A-I      intronic chr12:111116436(-) A-I      intronic chr12:111116424(-) A-I      intronic chr12:111092517(-) A-I      intronic chr12:111092501(-) A-I      intronic chr12:111092432(-) A-I      intronic chr12:111092399(-) A-I      intronic chr12:111092375(-) A-I      intronic chr12:111092347(-) A-I      intronic chr12:111092010(-) A-I      intronic chr12:111106063(-) A-I      intronic chr12:111091417(-) A-I      intronic chr12:111091242(-) A-I      intronic chr12:111091231(-) A-I      intronic chr12:111091223(-) A-I      intronic chr12:111091146(-) A-I      intronic chr12:111091141(-) A-I      intronic chr12:111116416(-) A-I      intronic chr12:111116348(-) A-I      intronic chr12:111103967(-) A-I      intronic chr12:111104971(-) A-I      intronic chr12:111105359(-) A-I      intronic chr12:111120165(-) A-I      intronic chr12:111091020(-) A-I      intronic chr12:111087868(-) A-I      intronic chr12:111092412(-) A-I      intronic chr12:111117414(-) A-I      intronic chr12:111117489(-) A-I      intronic chr12:111106188(-) A-I      intronic chr12:111106090(-) A-I      intronic chr12:111103214(-) A-I      intronic chr12:111119878(-) A-I      intronic chr12:111093595(-) A-I      intronic chr12:111117469(-) A-I      intronic chr12:111090115(-) A-I      intronic chr12:111101924(-) A-I      intronic chr12:111100504(-) A-I      intronic chr12:111098032(-) A-I      intronic chr12:111114843(-) A-I      intronic chr12:111120685(-) A-I      intronic chr12:111091099(-) A-I      intronic chr12:111095156(-) A-I      intronic chr12:111116426(-) A-I      intronic chr12:111120603(-) A-I      intronic chr12:111117611(-) A-I      intronic chr12:111119917(-) A-I      intronic chr12:111101967(-) A-I      intronic chr12:111091149(-) A-I      intronic chr12:111110036(-) A-I      intronic chr12:111105005(-) A-I      intronic chr12:111091481(-) A-I      intronic chr12:111105419(-) A-I      intronic chr12:111105117(-) A-I      intronic chr12:111093747(-) A-I      intronic chr12:111105211(-) A-I      intronic chr12:111105502(-) A-I      intronic chr12:111105290(-) A-I      intronic chr12:111106302(-) A-I      intronic chr12:111103239(-) A-I      intronic chr12:111101222(-) A-I      intronic chr12:111105016(-) A-I      intronic chr12:111120276(-) A-I      intronic chr12:111120133(-) A-I      intronic chr12:111119987(-) A-I      intronic chr12:111119969(-) A-I      intronic chr12:111119953(-) A-I      intronic chr12:111119937(-) A-I      intronic chr12:111119908(-) A-I      intronic chr12:111119869(-) A-I      intronic chr12:111118651(-) A-I      intronic chr12:111118613(-) A-I      intronic chr12:111118478(-) A-I      intronic chr12:111118477(-) A-I      intronic chr12:111118469(-) A-I      intronic chr12:111117536(-) A-I      intronic chr12:111117500(-) A-I      intronic chr12:111117440(-) A-I      intronic chr12:111117433(-) A-I      intronic chr12:111116508(-) A-I      intronic chr12:111116484(-) A-I      intronic chr12:111116464(-) A-I      intronic chr12:111095261(-) A-I      intronic chr12:111118623(-) A-I      intronic chr12:111101328(-) A-I      intronic chr12:111093674(-) A-I      intronic chr12:111114888(-) A-I      intronic chr12:111110063(-) A-I      intronic chr12:111120223(-) A-I      intronic chr12:111113638(-) A-I      intronic chr12:111091143(-) A-I      intronic chr12:111116460(-) A-I      intronic chr12:111105042(-) A-I      intronic chr12:111113602(-) A-I      intronic chr12:111104034(-) A-I      intronic chr12:111106296(-) A-I      intronic chr12:111120668(-) A-I      intronic chr12:111092462(-) A-I      intronic chr12:111091220(-) A-I      intronic chr12:111101783(-) A-I      intronic chr12:111120717(-) A-I      intronic chr12:111108842(-) A-I      intronic chr12:111118537(-) A-I      intronic chr12:111105405(-) A-I      intronic chr12:111114939(-) A-I      intronic chr12:111120130(-) A-I      intronic chr12:111109016(-) A-I      intronic chr12:111108762(-) A-I      intronic chr12:111101323(-) A-I      intronic chr12:111093615(-) A-I      intronic chr12:111120180(-) A-I      intronic chr12:111089936(-) A-I      intronic chr12:111120178(-) A-I      intronic chr12:111101997(-) A-I      intronic chr12:111091054(-) A-I      intronic chr12:111101820(-) A-I      intronic chr12:111105234(-) A-I      intronic chr12:111105510(-) A-I      intronic chr12:111117612(-) A-I      intronic chr12:111093687(-) A-I      intronic chr12:111095200(-) A-I      intronic chr12:111120659(-) A-I      intronic chr12:111105036(-) A-I      intronic chr12:111091429(-) A-I      intronic chr12:111109020(-) A-I      intronic chr12:111116536(-) A-I      intronic chr12:111116318(-) A-I      intronic chr12:111093761(-) A-I      intronic chr12:111114839(-) A-I      intronic chr12:111108831(-) A-I      intronic chr12:111119860(-) A-I      intronic chr12:111118471(-) A-I      intronic chr12:111091584(-) A-I      intronic chr12:111101998(-) A-I      intronic chr12:111106062(-) A-I      intronic chr12:111095218(-) A-I      intronic chr12:111091603(-) A-I      intronic chr12:111101980(-) A-I      intronic chr12:111101190(-) A-I      intronic chr12:111116435(-) A-I      intronic chr12:111101921(-) A-I      intronic chr12:111103206(-) A-I      intronic chr12:111114897(-) A-I      intronic chr12:111106104(-) A-I      intronic chr12:111105412(-) A-I      intronic chr12:111118504(-) A-I      intronic chr12:111092463(-) A-I      intronic chr12:111103285(-) A-I      intronic chr12:111120120(-) A-I      intronic chr12:111117514(-) A-I      intronic chr12:111092512(-) A-I      intronic chr12:111116530(-) A-I      intronic chr12:111093607(-) A-I      intronic chr12:111109049(-) A-I      intronic chr12:111120181(-) A-I      intronic chr12:111114779(-) A-I      intronic chr12:111103555(-) A-I      intronic chr12:111101322(-) A-I      intronic chr12:111105121(-) A-I      intronic chr12:111092461(-) A-I      intronic chr12:111119957(-) A-I      intronic chr12:111119930(-) A-I      intronic chr12:111108779(-) A-I      intronic chr12:111106186(-) A-I      intronic chr12:111091182(-) A-I      intronic chr12:111093683(-) A-I      intronic chr12:111106247(-) A-I      intronic chr12:111104090(-) A-I      intronic chr12:111101851(-) A-I      intronic chr12:111113708(-) A-I      intronic chr12:111105068(-) A-I      intronic chr12:111095094(-) A-I      intronic chr12:111120169(-) A-I      intronic chr12:111106210(-) A-I      intronic chr12:111093572(-) A-I      intronic chr12:111093783(-) A-I      intronic chr12:111093624(-) A-I      intronic chr12:111103235(-) A-I      intronic chr12:111120065(-) A-I      intronic chr12:111116503(-) A-I      intronic chr12:111114927(-) A-I      intronic chr12:111117595(-) A-I      intronic chr12:111116400(-) A-I      intronic chr12:111103275(-) A-I      intronic chr12:111114898(-) A-I      intronic chr12:111091534(-) A-I      intronic chr12:111117491(-) A-I      intronic chr12:111092408(-) A-I      intronic chr12:111108966(-) A-I      intronic chr12:111114948(-) A-I      intronic chr12:111120199(-) A-I      intronic chr12:111116427(-) A-I      intronic chr12:111117510(-) A-I      intronic chr12:111120299(-) A-I      intronic chr12:111103348(-) A-I      intronic chr12:111107610(-) A-I      intronic chr12:111093679(-) A-I      intronic chr12:111101928(-) A-I      intronic chr12:111105436(-) A-I      intronic chr12:111095176(-) A-I      intronic chr12:111116552(-) A-I      intronic chr12:111117477(-) A-I      intronic chr12:111117393(-) A-I      intronic chr12:111105501(-) A-I      intronic chr12:111120074(-) A-I      intronic chr12:111118622(-) A-I      intronic chr12:111091535(-) A-I      intronic chr12:111091507(-) A-I      intronic chr12:111091258(-) A-I      intronic chr12:111120172(-) A-I      intronic chr12:111103322(-) A-I      intronic chr12:111105206(-) A-I      intronic chr12:111105383(-) A-I      intronic chr12:111089423(-) A-I      intronic chr12:111116394(-) A-I      intronic chr12:111120686(-) A-I      intronic chr12:111116298(-) A-I      intronic chr12:111110053(-) A-I      intronic chr12:111087815(-) A-I      intronic chr12:111107772(-) A-I      intronic chr12:111116434(-) A-I      intronic chr12:111116371(-) A-I      intronic chr12:111113631(-) A-I      intronic chr12:111115003(-) A-I      intronic chr12:111120766(-) A-I      intronic chr12:111113539(-) A-I      intronic chr12:111090158(-) A-I      intronic chr12:111117661(-) A-I      intronic chr12:111105311(-) A-I      intronic chr12:111103190(-) A-I      intronic chr12:111105375(-) A-I      intronic chr12:111120066(-) A-I      intronic chr12:111120709(-) A-I      intronic chr12:111119822(-) A-I      intronic chr12:111103200(-) A-I      intronic chr12:111118704(-) A-I      intronic chr12:111105212(-) A-I      intronic chr12:111107753(-) A-I      intronic chr12:111093689(-) A-I      intronic chr12:111101920(-) A-I      intronic chr12:111101235(-) A-I      intronic chr12:111105546(-) A-I      intronic chr12:111103119(-) A-I      intronic chr12:111108485(-) A-I      intronic chr12:111103197(-) A-I      intronic chr12:111095192(-) A-I      intronic chr12:111095178(-) A-I      intronic chr12:111117546(-) A-I      intronic chr12:111100448(-) A-I      intronic chr12:111105077(-) A-I      intronic chr12:111101855(-) A-I      intronic chr12:111116425(-) A-I      intronic chr12:111092467(-) A-I      intronic chr12:111093692(-) A-I      intronic chr12:111116353(-) A-I      intronic chr12:111108878(-) A-I      intronic chr12:111106124(-) A-I      intronic chr12:111091097(-) A-I      intronic chr12:111089982(-) A-I      intronic chr12:111116529(-) A-I      intronic chr12:111116546(-) A-I      intronic chr12:111087658(-) A-I      intronic chr12:111119996(-) A-I      intronic chr12:111119909(-) A-I      intronic chr12:111106102(-) A-I      intronic chr12:111093670(-) A-I      intronic chr12:111092484(-) A-I      intronic chr12:111117494(-) A-I      intronic chr12:111118505(-) A-I      intronic chr12:111114855(-) A-I      intronic chr12:111108927(-) A-I      intronic chr12:111105078(-) A-I      intronic chr12:111119861(-) A-I      intronic chr12:111103576(-) A-I      intronic chr12:111117445(-) A-I      intronic chr12:111120113(-) A-I      intronic chr12:111120024(-) A-I      intronic chr12:111116420(-) A-I      intronic chr12:111105924(-) A-I      intronic chr12:111120183(-) A-I      intronic chr12:111100503(-) A-I      intronic chr12:111093602(-) A-I      intronic chr12:111120097(-) A-I      intronic chr12:111091525(-) A-I      intronic chr12:111105319(-) A-I      intronic chr12:111119904(-) A-I      intronic chr12:111091983(-) A-I      intronic chr12:111107644(-) A-I      intronic chr12:111101854(-) A-I      intronic chr12:111114817(-) A-I      intronic chr12:111118591(-) A-I      intronic chr12:111120646(-) A-I      intronic chr12:111100447(-) A-I      intronic chr12:111100453(-) A-I      intronic chr12:111104972(-) A-I      intronic chr12:111105474(-) A-I      intronic chr12:111108814(-) A-I      intronic chr12:111103118(-) A-I      intronic chr12:111104106(-) A-I      intronic chr12:111108800(-) A-I      intronic chr12:111091447(-) A-I      intronic chr12:111110059(-) A-I      intronic chr12:111119941(-) A-I      intronic chr12:111105399(-) A-I      intronic chr12:111105142(-) A-I      intronic chr12:111119827(-) A-I      intronic chr12:111120612(-) A-I      intronic chr12:111101943(-) A-I      intronic chr12:111118626(-) A-I      intronic chr12:111103253(-) A-I      intronic chr12:111119981(-) A-I      intronic chr12:111103298(-) A-I      intronic chr12:111114769(-) A-I      intronic chr12:111105072(-) A-I      intronic chr12:111109087(-) A-I      intronic chr12:111095224(-) A-I      intronic chr12:111101944(-) A-I      intronic chr12:111107791(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HVCN1	chr12:111108485(-) A-I intron -    15545495 chr12:111108762(-) A-I intron -    15545495 chr12:111108779(-) A-I intron -    15545495 chr12:111108831(-) A-I intron -    15545495 chr12:111117393(-) A-I intron -    15342557 chr12:111117445(-) A-I intron -    15342557 chr12:111117469(-) A-I intron -    15342557 chr12:111117477(-) A-I intron -    15342557 chr12:111117489(-) A-I intron -    15342557 chr12:111117491(-) A-I intron -    15342557 chr12:111117494(-) A-I intron -    15342557 chr12:111117509(-) A-I intron -    15342557 chr12:111117510(-) A-I intron -    15342557 chr12:111117514(-) A-I intron -    15342557 chr12:111117546(-) A-I intron -    15342557 chr12:111117595(-) A-I intron -    15342557 chr12:111117611(-) A-I intron -    15342557 chr12:111117612(-) A-I intron -    15342557 chr12:111117661(-) A-I intron -    15342557 chr12:111091149(-) A-I intron -    22327324 chr12:111105383(-) A-I intron -    22327324 chr12:111110053(-) A-I intron -    22327324 chr12:111120668(-) A-I intron -    22327324 chr12:111091739(-) T-G intron -    22484847 chr12:111091149(-) A-G intron -    22484847 chr12:111093595(-) A-G intron -    22484847 chr12:111093602(-) A-G intron -    22484847 chr12:111093624(-) A-G intron -    22484847 chr12:111093674(-) A-G intron -    22484847 chr12:111093679(-) A-G intron -    22484847 chr12:111093692(-) A-G intron -    22484847 chr12:111095200(-) A-G intron -    22484847 chr12:111101190(-) A-G intron -    22484847 chr12:111101235(-) A-G intron -    22484847 chr12:111101924(-) A-G intron -    22484847 chr12:111101944(-) A-G intron -    22484847 chr12:111101980(-) A-G intron -    22484847 chr12:111103235(-) A-G intron -    22484847 chr12:111103298(-) A-G intron -    22484847 chr12:111105375(-) A-G intron -    22484847 chr12:111106063(-) A-G intron -    22484847 chr12:111106102(-) A-G intron -    22484847 chr12:111106124(-) A-G intron -    22484847 chr12:111106247(-) A-G intron -    22484847 chr12:111107610(-) A-G intron -    22484847 chr12:111109016(-) A-G intron -    22484847 chr12:111114888(-) A-G intron -    22484847 chr12:111116348(-) A-G intron -    22484847 chr12:111116353(-) A-G intron -    22484847 chr12:111116420(-) A-G intron -    22484847 chr12:111116424(-) A-G intron -    22484847 chr12:111116425(-) A-G intron -    22484847 chr12:111119917(-) A-G intron -    22484847 chr12:111120130(-) A-G intron -    22484847 chr12:111120186(-) A-G intron -    22484847 chr12:111120668(-) A-G intron -    22484847 chr12:111089936(-) A-G intron -    22484847 chr12:111090090(-) A-G intron -    22484847 chr12:111090115(-) A-G intron -    22484847 chr12:111091143(-) A-G intron -    22484847 chr12:111091429(-) A-G intron -    22484847 chr12:111091447(-) A-G intron -    22484847 chr12:111091481(-) A-G intron -    22484847 chr12:111091507(-) A-G intron -    22484847 chr12:111091584(-) A-G intron -    22484847 chr12:111091603(-) A-G intron -    22484847 chr12:111092408(-) A-G intron -    22484847 chr12:111092412(-) A-G intron -    22484847 chr12:111092484(-) A-G intron -    22484847 chr12:111093747(-) A-G intron -    22484847 chr12:111093761(-) A-G intron -    22484847 chr12:111095094(-) A-G intron -    22484847 chr12:111095192(-) A-G intron -    22484847 chr12:111095224(-) A-G intron -    22484847 chr12:111095261(-) A-G intron -    22484847 chr12:111095306(-) C-T intron -    22484847 chr12:111095313(-) C-T intron -    22484847 chr12:111101222(-) A-G intron -    22484847 chr12:111101323(-) A-G intron -    22484847 chr12:111101328(-) A-G intron -    22484847 chr12:111101851(-) A-G intron -    22484847 chr12:111101920(-) A-G intron -    22484847 chr12:111101921(-) A-G intron -    22484847 chr12:111101928(-) A-G intron -    22484847 chr12:111101943(-) A-G intron -    22484847 chr12:111101998(-) A-G intron -    22484847 chr12:111103119(-) A-G intron -    22484847 chr12:111103214(-) A-G intron -    22484847 chr12:111103285(-) A-G intron -    22484847 chr12:111104116(-) A-G intron -    22484847 chr12:111105002(-) A-G intron -    22484847 chr12:111105005(-) A-G intron -    22484847 chr12:111105016(-) A-G intron -    22484847 chr12:111105068(-) A-G intron -    22484847 chr12:111105072(-) A-G intron -    22484847 chr12:111105077(-) A-G intron -    22484847 chr12:111105078(-) A-G intron -    22484847 chr12:111105117(-) A-G intron -    22484847 chr12:111105142(-) A-G intron -    22484847 chr12:111105211(-) A-G intron -    22484847 chr12:111105212(-) A-G intron -    22484847 chr12:111105234(-) A-G intron -    22484847 chr12:111105290(-) A-G intron -    22484847 chr12:111105474(-) A-G intron -    22484847 chr12:111105501(-) A-G intron -    22484847 chr12:111106210(-) A-G intron -    22484847 chr12:111106296(-) A-G intron -    22484847 chr12:111106302(-) A-G intron -    22484847 chr12:111107739(-) A-G intron -    22484847 chr12:111108814(-) A-G intron -    22484847 chr12:111108966(-) A-G intron -    22484847 chr12:111109087(-) A-G intron -    22484847 chr12:111110036(-) A-G intron -    22484847 chr12:111113485(-) A-T intron -    22484847 chr12:111113602(-) A-G intron -    22484847 chr12:111113631(-) A-G intron -    22484847 chr12:111113638(-) A-G intron -    22484847 chr12:111114817(-) A-G intron -    22484847 chr12:111114855(-) A-G intron -    22484847 chr12:111114898(-) A-G intron -    22484847 chr12:111116298(-) A-G intron -    22484847 chr12:111116503(-) A-G intron -    22484847 chr12:111116529(-) A-G intron -    22484847 chr12:111116536(-) A-G intron -    22484847 chr12:111116546(-) A-G intron -    22484847 chr12:111117414(-) A-G intron -    22484847 chr12:111118471(-) A-G intron -    22484847 chr12:111118504(-) A-G intron -    22484847 chr12:111118505(-) A-G intron -    22484847 chr12:111118537(-) A-G intron -    22484847 chr12:111119822(-) A-G intron -    22484847 chr12:111119860(-) A-G intron -    22484847 chr12:111119861(-) A-G intron -    22484847 chr12:111119878(-) A-G intron -    22484847 chr12:111119904(-) A-G intron -    22484847 chr12:111119981(-) A-G intron -    22484847 chr12:111119996(-) A-G intron -    22484847 chr12:111120024(-) A-G intron -    22484847 chr12:111120045(-) C-T intron -    22484847 chr12:111120113(-) A-G intron -    22484847 chr12:111120165(-) A-G intron -    22484847 chr12:111120172(-) A-G intron -    22484847 chr12:111120178(-) A-G intron -    22484847 chr12:111120180(-) A-G intron -    22484847 chr12:111120183(-) A-G intron -    22484847 chr12:111120223(-) A-G intron -    22484847 chr12:111120603(-) A-G intron -    22484847 chr12:111120659(-) A-G intron -    22484847 chr12:111120685(-) A-G intron -    22484847 chr12:111120686(-) A-G intron -    22484847 chr12:111120709(-) A-G intron -    22484847 chr12:111120717(-) A-G intron -    22484847 chr12:111120756(-) A-G intron -    22484847 chr12:111120766(-) A-G intron -    22484847 chr12:111121731(-) C-T intron -    22484847 chr12:111121732(-) C-T intron -    22484847 chr12:111123707(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HVCN1	chr12:111086601-111086602(-) m6A 3'UTR//intron       28052920 chr12:111086621-111086622(-) m6A 3'UTR//intron       28052920 chr12:111087068-111087069(-) m6A 3'UTR//intron       27773535//27371828 chr12:111087150-111087151(-) m6A 3'UTR//intron       27371828 chr12:111087185-111087186(-) m6A 3'UTR//intron       27371828 chr12:111087207-111087208(-) m6A 3'UTR//intron       27371828 chr12:111087213-111087214(-) m6A 3'UTR//intron       27371828 chr12:111087218-111087219(-) m6A CDS//intron       27371828 chr12:111087235-111087236(-) m6A CDS//intron       - chr12:111087253-111087254(-) m6A CDS//intron       - chr12:111087262-111087263(-) m6A CDS//intron       - chr12:111087277-111087278(-) m6A CDS//intron       - chr12:111099158-111099159(-) m6A CDS       28052920//27371828 chr12:111120563-111120564(-) m6A exon//intron       27371828 chr12:111121051-111121052(-) m6A 5'UTR//exon//intron       25456834//27371828 chr12:111125784-111125785(-) m6A 5'UTR//intron       25456834//27371828 chr12:111125820-111125821(-) m6A 5'UTR//intron       25456834//27371828 chr12:111126440-111126441(-) m6A 5'UTR//exon       25456834//27371828 chr12:111126504-111126505(-) m6A 5'UTR//exon       25456834//27371828 chr12:111126937-111126938(-) m6A 5'UTR//intron       25456834//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HVCN1	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-101-2-5p
Interactor2: HVCN1

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.