Detail Information

Basic Information:


  VIRBase ID:  

HHID00075996

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-101-2-5p:           TRIO:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-101-2-5p TRIO
miRBase
Accession/Entrez ID
MIMAT0037312 7204
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ARHGEF23//MEBAS//MRD44//MRD63//tgat

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-101-2-5p
rs1189997653 chr9:4850323    C/G
rs1411860402 chr9:4850328    G/C
rs1472339708 chr9:4850325    G/A
rs374692878 chr9:4850308    T/C
rs752365347 chr9:4850320    G/C
rs758036961 chr9:4850324    C/T
rs777507775 chr9:4850326    A/G
rs570832031 chr9:4850310    G/A
rs570832031 chr9:4850310    G/T
rs766953168 chr9:4850309    C/T
rs779213487 chr9:4850315    T/C
rs894878476 chr9:4850314    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TRIO
chr5:14176626(+) A-I      intronic
chr5:14176728(+) A-I      intronic
chr5:14176729(+) A-I      intronic
chr5:14176747(+) A-I      intronic
chr5:14176835(+) A-I      intronic
chr5:14179821(+) A-I      intronic
chr5:14186812(+) A-I      intronic
chr5:14186816(+) A-I      intronic
chr5:14186950(+) A-I      intronic
chr5:14190078(+) A-I      intronic
chr5:14191446(+) A-I      intronic
chr5:14191556(+) A-I      intronic
chr5:14192392(+) A-I      intronic
chr5:14192498(+) A-I      intronic
chr5:14192505(+) A-I      intronic
chr5:14192566(+) A-I      intronic
chr5:14205881(+) A-I      intronic
chr5:14205919(+) A-I      intronic
chr5:14205922(+) A-I      intronic
chr5:14205959(+) A-I      intronic
chr5:14206029(+) A-I      intronic
chr5:14207755(+) A-I      intronic
chr5:14233370(+) A-I      intronic
chr5:14233394(+) A-I      intronic
chr5:14233478(+) A-I      intronic
chr5:14233495(+) A-I      intronic
chr5:14234004(+) A-I      intronic
chr5:14234096(+) A-I      intronic
chr5:14248064(+) A-I      intronic
chr5:14248084(+) A-I      intronic
chr5:14310982(+) A-I      intronic
chr5:14363344(+) A-I      intronic
chr5:14396745(+) A-I      intronic
chr5:14421435(+) A-I      intronic
chr5:14421439(+) A-I      intronic
chr5:14421449(+) A-I      intronic
chr5:14421550(+) A-I      intronic
chr5:14421552(+) A-I      intronic
chr5:14421556(+) A-I      intronic
chr5:14421607(+) A-I      intronic
chr5:14424091(+) A-I      intronic
chr5:14424093(+) A-I      intronic
chr5:14447247(+) A-I      intronic
chr5:14447256(+) A-I      intronic
chr5:14459767(+) A-I      intronic
chr5:14459768(+) A-I      intronic
chr5:14459809(+) A-I      intronic
chr5:14460075(+) A-I      intronic
chr5:14460099(+) A-I      intronic
chr5:14460104(+) A-I      intronic
chr5:14460164(+) A-I      intronic
chr5:14460166(+) A-I      intronic
chr5:14460174(+) A-I      intronic
chr5:14460182(+) A-I      intronic
chr5:14460210(+) A-I      intronic
chr5:14505660(+) A-I      intronic
chr5:14182239(+) A-I      intronic
chr5:14155841(+) A-I      intronic
chr5:14474822(+) A-I      intronic
chr5:14161910(+) A-I      intronic
chr5:14158834(+) A-I      intronic
chr5:14432389(+) A-I      intronic
chr5:14474872(+) A-I      intronic
chr5:14476646(+) A-I      intronic
chr5:14476751(+) A-I      intronic
chr5:14476774(+) A-I      intronic
chr5:14476805(+) A-I      intronic
chr5:14476824(+) A-I      intronic
chr5:14500075(+) A-I      intronic
chr5:14500092(+) A-I      intronic
chr5:14512658(+) A-I      intronic
chr5:14512682(+) A-I      intronic
chr5:14512686(+) A-I      intronic
chr5:14512687(+) A-I      intronic
chr5:14524131(+) A-I      intronic
chr5:14524218(+) A-I      intronic
chr5:14459799(+) A-I      intronic
chr5:14459745(+) A-I      intronic
chr5:14459738(+) A-I      intronic
chr5:14158304(+) A-I      intronic
chr5:14158357(+) A-I      intronic
chr5:14158369(+) A-I      intronic
chr5:14158373(+) A-I      intronic
chr5:14158387(+) A-I      intronic
chr5:14158480(+) A-I      intronic
chr5:14159739(+) A-I      intronic
chr5:14159801(+) A-I      intronic
chr5:14159817(+) A-I      intronic
chr5:14159935(+) A-I      intronic
chr5:14161948(+) A-I      intronic
chr5:14161962(+) A-I      intronic
chr5:14162037(+) A-I      intronic
chr5:14162967(+) A-I      intronic
chr5:14163002(+) A-I      intronic
chr5:14173331(+) A-I      intronic
chr5:14173465(+) A-I      intronic
chr5:14176139(+) A-I      intronic
chr5:14176157(+) A-I      intronic
chr5:14176175(+) A-I      intronic
chr5:14176317(+) A-I      intronic
chr5:14176326(+) A-I      intronic
chr5:14176343(+) A-I      intronic
chr5:14176348(+) A-I      intronic
chr5:14176403(+) A-I      intronic
chr5:14176417(+) A-I      intronic
chr5:14176419(+) A-I      intronic
chr5:14176420(+) A-I      intronic
chr5:14176421(+) A-I      intronic
chr5:14176423(+) A-I      intronic
chr5:14176424(+) A-I      intronic
chr5:14176432(+) A-I      intronic
chr5:14176440(+) A-I      intronic
chr5:14176458(+) A-I      intronic
chr5:14176464(+) A-I      intronic
chr5:14176499(+) A-I      intronic
chr5:14192548(+) A-I      intronic
chr5:14158475(+) A-I      intronic
chr5:14158274(+) A-I      intronic
chr5:14421582(+) A-I      intronic
chr5:14459710(+) A-I      intronic
chr5:14179927(+) A-I      intronic
chr5:14476853(+) A-I      intronic
chr5:14180167(+) A-I      intronic
chr5:14460232(+) A-I      intronic
chr5:14460142(+) A-I      intronic
chr5:14161120(+) A-I      intronic
chr5:14176472(+) A-I      intronic
chr5:14180087(+) A-I      intronic
chr5:14233375(+) A-I      intronic
chr5:14234119(+) A-I      intronic
chr5:14157755(+) A-I      intronic
chr5:14158413(+) A-I      intronic
chr5:14474828(+) A-I      intronic
chr5:14234017(+) A-I      intronic
chr5:14157771(+) A-I      intronic
chr5:14233502(+) A-I      intronic
chr5:14475022(+) A-I      intronic
chr5:14460081(+) A-I      intronic
chr5:14158454(+) A-I      intronic
chr5:14424101(+) A-I      intronic
chr5:14191499(+) A-I      intronic
chr5:14396658(+) A-I      intronic
chr5:14179937(+) A-I      intronic
chr5:14474858(+) A-I      intronic
chr5:14192618(+) A-I      intronic
chr5:14421602(+) A-I      intronic
chr5:14180881(+) A-I      intronic
chr5:14439308(+) A-I      intronic
chr5:14363164(+) A-I      intronic
chr5:14170790(+) A-I      intronic
chr5:14179819(+) A-I      intronic
chr5:14421623(+) A-I      intronic
chr5:14186877(+) A-I      intronic
chr5:14180832(+) A-I      intronic
chr5:14318579(+) A-I      intronic
chr5:14233452(+) A-I      intronic
chr5:14158455(+) A-I      intronic
chr5:14421547(+) A-I      intronic
chr5:14162939(+) A-I      intronic
chr5:14266333(+) A-I      intronic
chr5:14234166(+) A-I      intronic
chr5:14291733(+) A-I      intronic
chr5:14454084(+) A-I      intronic
chr5:14476645(+) A-I      intronic
chr5:14476756(+) A-I      intronic
chr5:14233519(+) A-I      intronic
chr5:14176215(+) A-I      intronic
chr5:14191519(+) A-I      intronic
chr5:14212187(+) A-I      intronic
chr5:14439339(+) A-I      intronic
chr5:14460154(+) A-I      intronic
chr5:14234114(+) A-I      intronic
chr5:14524387(+) A-I      intronic
chr5:14439211(+) A-I      intronic
chr5:14396779(+) A-I      intronic
chr5:14421566(+) A-I      intronic
chr5:14159811(+) A-I      intronic
chr5:14289848(+) A-I      intronic
chr5:14179946(+) A-I      intronic
chr5:14191424(+) A-I      intronic
chr5:14395900(+) A-I      intronic
chr5:14253677(+) A-I      intronic
chr5:14340493(+) A-I      intronic
chr5:14476858(+) A-I      intronic
chr5:14459718(+) A-I      intronic
chr5:14176737(+) A-I      intronic
chr5:14191523(+) A-I      intronic
chr5:14212262(+) A-I      intronic
chr5:14158833(+) A-I      intronic
chr5:14233399(+) A-I      intronic
chr5:14199132(+) A-I      intronic
chr5:14460105(+) A-I      intronic
chr5:14363319(+) A-I      intronic
chr5:14424097(+) A-I      intronic
chr5:14233352(+) A-I      intronic
chr5:14186787(+) A-I      intronic
chr5:14199107(+) A-I      intronic
chr5:14179624(+) A-I      intronic
chr5:14163514(+) A-I      intronic
chr5:14157839(+) A-I      intronic
chr5:14476849(+) A-I      intronic
chr5:14176675(+) A-I      intronic
chr5:14207277(+) A-I      intronic
chr5:14159856(+) A-I      intronic
chr5:14383147(+) A-I      intronic
chr5:14158685(+) A-I      intronic
chr5:14234029(+) A-I      intronic
chr5:14179630(+) A-I      intronic
chr5:14161935(+) A-I      intronic
chr5:14233931(+) A-I      intronic
chr5:14192573(+) A-I      intronic
chr5:14524125(+) A-I      intronic
chr5:14176429(+) A-I      intronic
chr5:14158281(+) A-I      intronic
chr5:14180000(+) A-I      intronic
chr5:14158348(+) A-I      intronic
chr5:14439267(+) A-I      intronic
chr5:14528041(+) A-I      intronic
chr5:14176624(+) A-I      intronic
chr5:14421536(+) A-I      intronic
chr5:14159859(+) A-I      intronic
chr5:14459728(+) A-I      intronic
chr5:14179665(+) A-I      intronic
chr5:14439173(+) A-I      intronic
chr5:14421475(+) A-I      intronic
chr5:14476780(+) A-I      intronic
chr5:14180063(+) A-I      intronic
chr5:14421593(+) A-I      intronic
chr5:14476766(+) A-I      intronic
chr5:14474841(+) A-I      intronic
chr5:14421525(+) A-I      intronic
chr5:14233362(+) A-I      intronic
chr5:14157722(+) A-I      intronic
chr5:14180026(+) A-I      intronic
chr5:14447242(+) A-I      intronic
chr5:14179837(+) A-I      intronic
chr5:14163565(+) A-I      intronic
chr5:14179633(+) A-I      intronic
chr5:14201222(+) A-I      intronic
chr5:14395988(+) A-I      intronic
chr5:14233426(+) A-I      intronic
chr5:14234000(+) A-I      intronic
chr5:14476809(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TRIO
chr5:14250626(+) A-I intron -    19478186
chr5:14234119(+) A-I intron -    22327324
chr5:14434846(+) A-I intron -    21960545
chr5:14157722(+) A-G intron -    22484847
chr5:14157755(+) A-G intron -    22484847
chr5:14157771(+) A-G intron -    22484847
chr5:14157839(+) A-G intron -    22484847
chr5:14157949(+) A-G intron -    22484847
chr5:14158274(+) A-G intron -    22484847
chr5:14158281(+) A-G intron -    22484847
chr5:14158294(+) A-G intron -    22484847
chr5:14158348(+) A-G intron -    22484847
chr5:14158413(+) A-G intron -    22484847
chr5:14158833(+) A-G intron -    22484847
chr5:14159813(+) A-G intron -    22484847
chr5:14161206(+) T-C intron -    22484847
chr5:14161867(+) A-G intron -    22484847
chr5:14161935(+) A-G intron -    22484847
chr5:14162939(+) A-G intron -    22484847
chr5:14163511(+) A-G intron -    22484847
chr5:14163514(+) A-G intron -    22484847
chr5:14163520(+) G-A intron -    22484847
chr5:14163523(+) G-A intron -    22484847
chr5:14163565(+) A-G intron -    22484847
chr5:14176215(+) A-G intron -    22484847
chr5:14176429(+) A-G intron -    22484847
chr5:14176472(+) A-G intron -    22484847
chr5:14176500(+) A-G intron -    22484847
chr5:14176624(+) A-G intron -    22484847
chr5:14176662(+) A-G intron -    22484847
chr5:14176666(+) A-G intron -    22484847
chr5:14176675(+) A-G intron -    22484847
chr5:14176680(+) A-G intron -    22484847
chr5:14176737(+) A-G intron -    22484847
chr5:14176826(+) A-G intron -    22484847
chr5:14179624(+) A-G intron -    22484847
chr5:14179630(+) A-G intron -    22484847
chr5:14179632(+) A-G intron -    22484847
chr5:14179633(+) A-G intron -    22484847
chr5:14179665(+) A-G intron -    22484847
chr5:14179937(+) A-G intron -    22484847
chr5:14179946(+) A-G intron -    22484847
chr5:14180125(+) G-A intron -    22484847
chr5:14180832(+) A-G intron -    22484847
chr5:14180881(+) A-G intron -    22484847
chr5:14186877(+) A-G intron -    22484847
chr5:14189971(+) A-G intron -    22484847
chr5:14190117(+) T-C intron -    22484847
chr5:14190122(+) T-A intron -    22484847
chr5:14191499(+) A-G intron -    22484847
chr5:14191519(+) A-G intron -    22484847
chr5:14191523(+) A-G intron -    22484847
chr5:14192573(+) A-G intron -    22484847
chr5:14192585(+) A-G intron -    22484847
chr5:14192618(+) A-G intron -    22484847
chr5:14199107(+) A-G intron -    22484847
chr5:14207277(+) A-G intron -    22484847
chr5:14228883(+) A-G intron -    22484847
chr5:14233399(+) A-G intron -    22484847
chr5:14233502(+) A-G intron -    22484847
chr5:14233519(+) A-G intron -    22484847
chr5:14233832(+) A-G intron -    22484847
chr5:14233931(+) A-G intron -    22484847
chr5:14233948(+) A-G intron -    22484847
chr5:14234000(+) A-G intron -    22484847
chr5:14234017(+) A-G intron -    22484847
chr5:14234029(+) A-G intron -    22484847
chr5:14234114(+) A-G intron -    22484847
chr5:14234119(+) A-G intron -    22484847
chr5:14234125(+) A-G intron -    22484847
chr5:14289534(+) A-G intron -    22484847
chr5:14363164(+) A-G intron -    22484847
chr5:14363319(+) A-G intron -    22484847
chr5:14363352(+) G-T intron -    22484847
chr5:14378791(+) C-T intron -    22484847
chr5:14396658(+) A-G intron -    22484847
chr5:14396779(+) A-G intron -    22484847
chr5:14412100(+) C-T intron -    22484847
chr5:14421475(+) A-G intron -    22484847
chr5:14421526(+) A-G intron -    22484847
chr5:14421582(+) A-G intron -    22484847
chr5:14421593(+) A-G intron -    22484847
chr5:14421602(+) A-G intron -    22484847
chr5:14424135(+) G-C intron -    22484847
chr5:14430798(+) A-G intron -    22484847
chr5:14430836(+) A-T intron -    22484847
chr5:14430837(+) T-A intron -    22484847
chr5:14439173(+) A-G intron -    22484847
chr5:14439186(+) A-G intron -    22484847
chr5:14439211(+) A-G intron -    22484847
chr5:14439308(+) A-G intron -    22484847
chr5:14439339(+) A-G intron -    22484847
chr5:14447242(+) A-G intron -    22484847
chr5:14454084(+) A-G intron -    22484847
chr5:14459718(+) A-G intron -    22484847
chr5:14459728(+) A-G intron -    22484847
chr5:14460105(+) A-G intron -    22484847
chr5:14460142(+) A-G intron -    22484847
chr5:14460154(+) A-G intron -    22484847
chr5:14474828(+) A-G intron -    22484847
chr5:14474830(+) A-G intron -    22484847
chr5:14474841(+) A-G intron -    22484847
chr5:14474994(+) A-G intron -    22484847
chr5:14475022(+) A-G intron -    22484847
chr5:14476645(+) A-G intron -    22484847
chr5:14476760(+) A-G intron -    22484847
chr5:14476766(+) A-G intron -    22484847
chr5:14476809(+) A-G intron -    22484847
chr5:14500857(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TRIO
chr5:14165130-14165131(+) Am intron       -
chr5:14287194-14287195(+) m6A exon//intron       24284625
chr5:14287203-14287204(+) m6A exon//intron       24284625//24981863
chr5:14290948-14290949(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14290991-14290992(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14290999-14291000(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291060-14291061(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291104-14291105(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291120-14291121(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291170-14291171(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291191-14291192(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291200-14291201(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291230-14291231(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14291293-14291294(+) m6A CDS//exon       24284625//24209618//22575960//22608085
chr5:14291321-14291322(+) m6A CDS//exon       22575960//22608085
chr5:14293160-14293161(+) m6A CDS//exon       -
chr5:14293180-14293181(+) m6A CDS//exon       -
chr5:14297337-14297338(+) m6A CDS//exon       22575960
chr5:14359556-14359557(+) Cm CDS//exon       -
chr5:14364862-14364863(+) Cm CDS//exon       -
chr5:14364873-14364874(+) m6A CDS//exon       22575960
chr5:14364921-14364922(+) m6A CDS//exon       22575960
chr5:14367012-14367013(+) m6A CDS//exon       24981863
chr5:14368819-14368820(+) m6A CDS//exon       24981863
chr5:14368889-14368890(+) m6A CDS//exon       24284625
chr5:14368901-14368902(+) m6A CDS//exon       24284625
chr5:14368945-14368946(+) Am CDS//exon       -
chr5:14368996-14368997(+) m6A CDS//exon       24284625//22575960
chr5:14369508-14369509(+) m6A CDS//exon       24284625//22575960
chr5:14369531-14369532(+) m6A CDS//exon       24284625//22575960
chr5:14369564-14369565(+) m6A CDS//exon       22575960
chr5:14369576-14369577(+) m6A CDS//exon       22575960
chr5:14387549-14387550(+) m6A CDS//exon       24981863
chr5:14397270-14397271(+) m6A exon//intron       24981863
chr5:14397419-14397420(+) m6A exon//intron       -
chr5:14399000-14399001(+) m6A CDS//exon       -
chr5:14405972-14405973(+) m6A CDS//exon       24981863
chr5:14405981-14405982(+) m6A CDS//exon       24981863
chr5:14406067-14406068(+) m6A CDS//exon       24981863
chr5:14406084-14406085(+) m6A CDS//exon       -
chr5:14420593-14420594(+) m6A exon//intron       -
chr5:14420628-14420629(+) m6A exon//intron       -
chr5:14461318-14461319(+) Am CDS//exon       -
chr5:14461373-14461374(+) m6A CDS//exon       24284625//24981863//27371828//27773536
chr5:14463017-14463018(+) m6A CDS//exon       -
chr5:14465692-14465693(+) m6A CDS//exon       -
chr5:14485261-14485262(+) m6A CDS//exon//intron       24209618
chr5:14485300-14485301(+) m6A CDS//exon//intron       24209618
chr5:14485334-14485335(+) m6A CDS//exon//intron       24209618
chr5:14487602-14487603(+) m6A CDS//exon//intron       24209618
chr5:14487827-14487828(+) m6A CDS//exon//intron       24209618//22575960
chr5:14488109-14488110(+) m6A CDS//exon//intron       24284625//25456834//24981863//22575960
chr5:14488250-14488251(+) m6A CDS//exon//intron       24284625
chr5:14488273-14488274(+) m6A CDS//exon//intron       24284625
chr5:14492802-14492803(+) m6A 3'UTR//CDS//exon//intron       24284625
chr5:14492904-14492905(+) m6A 3'UTR//CDS//exon//intron       24284625
chr5:14492915-14492916(+) m6A 3'UTR//CDS//exon//intron       24284625
chr5:14497101-14497102(+) m6A 3'UTR//CDS//intron       24284625//24981863
chr5:14498241-14498242(+) m6A 3'UTR//CDS//intron       24284625
chr5:14502723-14502724(+) m6A 3'UTR//CDS//exon//intron       -
chr5:14504541-14504542(+) m6A 3'UTR//CDS//exon//intron       -
chr5:14504572-14504573(+) m6A 3'UTR//CDS//exon//intron       -
chr5:14504670-14504671(+) m6A 3'UTR//CDS//exon//intron       24284625
chr5:14507361-14507362(+) m6A 3'UTR//CDS//intron       24284625
chr5:14508035-14508036(+) m6A 3'UTR//CDS//exon//intron       24284625//22575960
chr5:14508100-14508101(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//22575960//22608085
chr5:14508136-14508137(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//22575960//22608085
chr5:14508234-14508235(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508244-14508245(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508259-14508260(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508337-14508338(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508431-14508432(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508458-14508459(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508496-14508497(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508601-14508602(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508609-14508610(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508684-14508685(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508716-14508717(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr5:14508813-14508814(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508867-14508868(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508902-14508903(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508970-14508971(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14508978-14508979(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr5:14509062-14509063(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr5:14509127-14509128(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr5:14509236-14509237(+) m6A 3'UTR//intron       24284625//24209618//24981863
chr5:14509553-14509554(+) m6A 3'UTR//CDS//intron       24981863
chr5:14509582-14509583(+) m6A 3'UTR//intron       24981863
chr5:14509615-14509616(+) m6A 3'UTR//intron       24981863
chr5:14509701-14509702(+) m6A 3'UTR//intron       24981863
chr5:14509719-14509720(+) m6A 3'UTR//intron       24981863
chr5:14509734-14509735(+) m6A 3'UTR//intron       24981863
chr5:14509940-14509941(+) m6A 3'UTR//intron       24284625//24981863//26404942//22608085
chr5:14509957-14509958(+) m6A 3'UTR//intron       24284625//24981863//26404942//22608085
chr5:14509983-14509984(+) m6A 3'UTR//intron       24284625//24981863//26404942//22608085
chr5:14510005-14510006(+) m6A 3'UTR//intron       24284625//24981863//26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TRIO
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-101-2-5p
Interactor2: TRIO

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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