Basic Information:

  VIRBase ID:  

HHID00075535

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-128-2-5p:  MIMAT0031095          ZNF462:  NM_021224     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-128-2-5p	ZNF462
miRBase Accession/Entrez ID	MIMAT0031095	58499
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	WSKA//Zfp462//ZFPIP

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-128-2-5p	rs1300414924 chr3:35744490    G/A rs1305340991 chr3:35744500    A/G rs773585541 chr3:35744508    C/T rs1273290796 chr3:35744497    G/A rs748691104 chr3:35744494    G/A rs769991861 chr3:35744496    C/T rs920224719 chr3:35744492    G/A

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF462	chr9:109686803-109686804(+) m6A CDS//intron       24981863 chr9:109686833-109686834(+) m6A CDS//intron       24981863 chr9:109686846-109686847(+) m6A CDS//intron       24981863 chr9:109686946-109686947(+) m6A CDS//intron       - chr9:109686987-109686988(+) m6A CDS//intron       - chr9:109687023-109687024(+) m6A CDS//intron       - chr9:109687039-109687040(+) m6A CDS//intron       - chr9:109687061-109687062(+) m6A CDS//intron       24981863 chr9:109687327-109687328(+) m6A CDS//intron       24981863//22575960 chr9:109687379-109687380(+) m6A CDS//intron       24981863//22575960 chr9:109687414-109687415(+) m6A CDS//intron       24981863//22575960 chr9:109687471-109687472(+) m6A CDS//intron       24981863 chr9:109687571-109687572(+) m6A CDS//intron       24981863 chr9:109687591-109687592(+) m6A CDS//intron       24981863 chr9:109687644-109687645(+) m6A CDS//intron       24981863 chr9:109687659-109687660(+) m6A CDS//intron       24981863 chr9:109687930-109687931(+) m6A CDS//intron       25456834//24981863 chr9:109688058-109688059(+) m6A CDS//intron       24981863 chr9:109688198-109688199(+) m6A CDS//intron       - chr9:109688272-109688273(+) m6A CDS//intron       24981863 chr9:109688320-109688321(+) m6A CDS//intron       24981863 chr9:109688325-109688326(+) m6A CDS//intron       24981863 chr9:109688378-109688379(+) m6A CDS//intron       24981863 chr9:109688408-109688409(+) m6A CDS//intron       24981863 chr9:109688421-109688422(+) m6A CDS//intron       24981863 chr9:109688430-109688431(+) m6A CDS//intron       24981863 chr9:109688519-109688520(+) m6A CDS//intron       24981863 chr9:109688609-109688610(+) m6A CDS//intron       24981863 chr9:109688656-109688657(+) m6A CDS//intron       24284625//24981863//22575960 chr9:109688671-109688672(+) m6A CDS//intron       24284625//24981863//22575960 chr9:109688690-109688691(+) m6A CDS//intron       24284625//24981863//22575960 chr9:109688696-109688697(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22575960 chr9:109688730-109688731(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22575960 chr9:109688825-109688826(+) m6A CDS//intron       24981863//26404942 chr9:109689212-109689213(+) m6A CDS//exon//intron       24209618 chr9:109689223-109689224(+) m6A CDS//exon//intron       24209618 chr9:109689254-109689255(+) m6A CDS//exon//intron       24209618//24981863 chr9:109689348-109689349(+) m6A CDS//exon//intron       24981863 chr9:109689515-109689516(+) m6A CDS//intron       24209618//24981863 chr9:109689543-109689544(+) m6A CDS//intron       24209618//24981863 chr9:109689600-109689601(+) m6A CDS//intron       24209618//24981863 chr9:109689636-109689637(+) m6A CDS//intron       24209618//24981863 chr9:109689722-109689723(+) m6A CDS//intron       - chr9:109689965-109689966(+) m6A CDS//intron       24981863 chr9:109689975-109689976(+) m6A CDS//intron       24981863 chr9:109690052-109690053(+) m6A CDS//intron       24981863 chr9:109690203-109690204(+) m6A CDS//intron       24981863 chr9:109690236-109690237(+) m6A CDS//intron       24981863 chr9:109690253-109690254(+) m6A CDS//intron       24981863 chr9:109690294-109690295(+) m6A CDS//intron       24981863 chr9:109690310-109690311(+) m6A CDS//intron       24981863 chr9:109690340-109690341(+) m6A CDS//intron       24981863 chr9:109690406-109690407(+) m6A CDS//intron       - chr9:109690484-109690485(+) m6A CDS//intron       - chr9:109690539-109690540(+) m6A CDS//intron       24209618//24981863 chr9:109690709-109690710(+) m6A CDS//intron       24981863 chr9:109690832-109690833(+) m6A CDS//intron       24981863 chr9:109690932-109690933(+) m6A CDS//intron       - chr9:109690965-109690966(+) m6A CDS//intron       - chr9:109691273-109691274(+) m6A CDS//intron       24981863 chr9:109691395-109691396(+) m6A CDS//intron       24981863 chr9:109691810-109691811(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr9:109691822-109691823(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr9:109691858-109691859(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr9:109691892-109691893(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960 chr9:109691927-109691928(+) m6A CDS//intron       24209618//25456834//24981863 chr9:109691979-109691980(+) m6A CDS//exon//intron       24209618//25456834//24981863 chr9:109692030-109692031(+) m6A CDS//exon//intron       24981863 chr9:109736786-109736787(+) m6A 3'UTR//intron       25456834 chr9:109736859-109736860(+) m6A 3'UTR//intron       25456834 chr9:109736877-109736878(+) m6A 3'UTR//intron       25456834 chr9:109736884-109736885(+) m6A 3'UTR//intron       25456834 chr9:109765624-109765625(+) m6A CDS       24981863 chr9:109765668-109765669(+) m6A CDS       24981863 chr9:109765686-109765687(+) m6A CDS       24981863 chr9:109771928-109771929(+) m6A CDS//exon       24981863 chr9:109771940-109771941(+) m6A CDS//exon       24981863 chr9:109773165-109773166(+) m6A CDS//exon       24284625//24209618//25456834//24981863 chr9:109773222-109773223(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960 chr9:109773242-109773243(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960 chr9:109773335-109773336(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr9:109773346-109773347(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr9:109773393-109773394(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr9:109773407-109773408(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr9:109773412-109773413(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr9:109773430-109773431(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr9:109773435-109773436(+) m6A 3'UTR       24209618//25456834//24981863//22575960 chr9:109773625-109773626(+) m6A 3'UTR       24209618//24981863 chr9:109773638-109773639(+) m6A 3'UTR       24209618//24981863 chr9:109773662-109773663(+) m6A 3'UTR       24209618//24981863 chr9:109773741-109773742(+) m6A 3'UTR       25456834//24981863 chr9:109773771-109773772(+) m6A 3'UTR       25456834//24981863 chr9:109773778-109773779(+) m6A 3'UTR       25456834//24981863 chr9:109773785-109773786(+) m6A 3'UTR       25456834//24981863 chr9:109773792-109773793(+) m6A 3'UTR       25456834//24981863 chr9:109773806-109773807(+) m6A 3'UTR       25456834//24981863 chr9:109773821-109773822(+) m6A 3'UTR       25456834//24981863 chr9:109773848-109773849(+) m6A 3'UTR       25456834//24981863 chr9:109773862-109773863(+) m6A 3'UTR       25456834//24981863 chr9:109773916-109773917(+) m6A 3'UTR       25456834//24981863 chr9:109773968-109773969(+) m6A 3'UTR       25456834//24981863 chr9:109774046-109774047(+) m6A 3'UTR       24981863 chr9:109774051-109774052(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-128-2-5p	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
	ZNF462	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-128-2-5p
Interactor2: ZNF462

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.