Basic Information:

  VIRBase ID:  

HHID00075427

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-128-1-5p:  MIMAT0026477          ZNF81:  NR_165431     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-128-1-5p	ZNF81
miRBase Accession/Entrez ID	MIMAT0026477	347344
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	dJ54B20.6//HFZ20//MRX45

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-128-1-5p	rs1421580157 chr2:135665426    G/C rs1484545550 chr2:135665425    T/C rs759451365 chr2:135665421    G/A rs762767177 chr2:135665411    C/T rs117812383 chr2:135665418    G/A rs1258427834 chr2:135665412    G/A rs1258427834 chr2:135665412    G/C rs1258427834 chr2:135665412    G/T rs368374639 chr2:135665414    G/A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF81	chrX:47718368(+) A-I      intronic chrX:47718369(+) A-I      intronic chrX:47718374(+) A-I      intronic chrX:47733105(+) A-I      intronic chrX:47733109(+) A-I      intronic chrX:47706675(+) A-I      intronic chrX:47706645(+) A-I      intronic chrX:47709657(+) A-I      intronic chrX:47708811(+) A-I      intronic chrX:47709674(+) A-I      intronic chrX:47708885(+) A-I      intronic chrX:47719787(+) A-I      intronic chrX:47733266(+) A-I      intronic chrX:47713027(+) A-I      intronic chrX:47714240(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF81	chrX:47774400-47774401(+) m6A CDS//intron       24981863//22608085 chrX:47774455-47774456(+) m6A CDS//intron       24981863//22608085 chrX:47774479-47774480(+) m6A CDS//intron       24981863//22608085 chrX:47774488-47774489(+) m6A CDS//intron       24981863//22608085 chrX:47774556-47774557(+) m6A CDS//intron       24284625//24981863//22608085 chrX:47774608-47774609(+) m6A CDS//intron       24284625//24981863//22608085 chrX:47774655-47774656(+) m6A CDS//intron       24284625//24981863//22608085 chrX:47774691-47774692(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chrX:47774702-47774703(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chrX:47774733-47774734(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chrX:47774818-47774819(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chrX:47774865-47774866(+) m6A CDS//intron       24981863//22608085 chrX:47774944-47774945(+) m6A CDS//intron       24981863//22608085 chrX:47775028-47775029(+) m6A CDS//intron       24284625//24981863//22608085 chrX:47775095-47775096(+) m6A CDS//intron       24284625//24981863//22608085 chrX:47775112-47775113(+) m6A CDS//intron       24284625//24981863//22608085 chrX:47775176-47775177(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chrX:47775196-47775197(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chrX:47775237-47775238(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chrX:47775280-47775281(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chrX:47775532-47775533(+) m6A CDS//intron       22608085 chrX:47775673-47775674(+) m6A CDS//intron       24981863//22608085 chrX:47775680-47775681(+) m6A CDS//intron       24981863//22608085 chrX:47775700-47775701(+) m6A CDS//intron       24981863//22608085 chrX:47775826-47775827(+) m6A CDS//intron       24209618//24981863//27773535//22608085 chrX:47775868-47775869(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085 chrX:47775925-47775926(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085 chrX:47775932-47775933(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085 chrX:47775952-47775953(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chrX:47776114-47776115(+) m6A 3'UTR//intron       22608085 chrX:47776194-47776195(+) m6A 3'UTR//intron       24981863//22608085 chrX:47777261-47777262(+) m6A 3'UTR//intron       22608085 chrX:47777311-47777312(+) m6A 3'UTR//intron       24981863//22608085 chrX:47777320-47777321(+) m6A 3'UTR//intron       24981863//22608085 chrX:47777332-47777333(+) m6A 3'UTR//intron       24981863//22608085 chrX:47777405-47777406(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chrX:47777443-47777444(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chrX:47777452-47777453(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chrX:47777550-47777551(+) m6A 3'UTR//intron       24284625//24209618//24981863//22575960//22608085 chrX:47777725-47777726(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777770-47777771(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chrX:47777784-47777785(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chrX:47777856-47777857(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777910-47777911(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777926-47777927(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777961-47777962(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777977-47777978(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777987-47777988(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47777993-47777994(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47778079-47778080(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47778125-47778126(+) m6A 3'UTR//intron       24284625//24981863//22575960//22608085 chrX:47778133-47778134(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chrX:47778174-47778175(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chrX:47778219-47778220(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chrX:47778261-47778262(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chrX:47778412-47778413(+) m6A 3'UTR//intron       24209618//22608085 chrX:47778420-47778421(+) m6A 3'UTR//intron       24209618//22608085 chrX:47778434-47778435(+) m6A 3'UTR//intron       24209618//22608085 chrX:47778451-47778452(+) m6A 3'UTR//intron       24209618//22608085 chrX:47778465-47778466(+) m6A 3'UTR//intron       22608085 chrX:47778538-47778539(+) m6A 3'UTR//intron       22608085 chrX:47780504-47780505(+) m6A 3'UTR//intron       24981863 chrX:47780636-47780637(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47780722-47780723(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chrX:47780744-47780745(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chrX:47780796-47780797(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chrX:47780848-47780849(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chrX:47780982-47780983(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47781063-47781064(+) m6A 3'UTR//intron       24284625//24981863//22608085 chrX:47781121-47781122(+) m6A 3'UTR//intron       24981863//22608085 chrX:47781171-47781172(+) m6A 3'UTR//intron       22608085 chrX:47781213-47781214(+) m6A 3'UTR//intron       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-128-1-5p	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Fibroblasts|Mesenchymal stem cells     -
	ZNF81	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-128-1-5p
Interactor2: ZNF81

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.