Basic Information:

  VIRBase ID:  

HHID00074731

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-374c-5p:  MIMAT0018443          SLC12A6:  NM_001042497     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-374c-5p	SLC12A6
miRBase Accession/Entrez ID	MIMAT0018443	9990
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACCPN//KCC3//KCC3A//KCC3B

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-374c-5p	rs1385868400 chrX:74218580    G/GTC rs1191599957 chrX:74218582    T/C rs1016006572 chrX:74218565    T/C rs553426810 chrX:74218566    A/T

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC12A6	chr15:34541517(-) A-I      intronic chr15:34542266(-) A-I      intronic chr15:34542307(-) A-I      intronic chr15:34542324(-) A-I      intronic chr15:34542325(-) A-I      intronic chr15:34600569(-) A-I      intronic chr15:34523960(-) A-I      3'UTR chr15:34523961(-) A-I      3'UTR chr15:34618928(-) A-I      intronic chr15:34524047(-) A-I      3'UTR chr15:34524464(-) A-I      3'UTR chr15:34524757(-) A-I      3'UTR chr15:34524108(-) A-I      3'UTR chr15:34522305(-) A-I      3'UTR chr15:34522291(-) A-I      3'UTR chr15:34522285(-) A-I      3'UTR chr15:34522281(-) A-I      3'UTR chr15:34522265(-) A-I      3'UTR chr15:34522261(-) A-I      3'UTR chr15:34600582(-) A-I      intronic chr15:34524497(-) A-I      3'UTR chr15:34618961(-) A-I      intronic chr15:34523970(-) A-I      3'UTR chr15:34618982(-) A-I      intronic chr15:34524623(-) A-I      3'UTR chr15:34619008(-) A-I      intronic chr15:34524624(-) A-I      3'UTR chr15:34524696(-) A-I      3'UTR chr15:34600591(-) A-I      intronic chr15:34620972(-) A-I      intronic chr15:34600596(-) A-I      intronic chr15:34619025(-) A-I      intronic chr15:34523964(-) A-I      3'UTR chr15:34623579(-) A-I      intronic chr15:34623432(-) A-I      intronic chr15:34623121(-) A-I      intronic chr15:34623119(-) A-I      intronic chr15:34622656(-) A-I      intronic chr15:34622653(-) A-I      intronic chr15:34620984(-) A-I      intronic chr15:34620829(-) A-I      intronic chr15:34619747(-) A-I      intronic chr15:34619053(-) A-I      intronic chr15:34618977(-) A-I      intronic chr15:34618971(-) A-I      intronic chr15:34615955(-) A-I      intronic chr15:34611953(-) A-I      intronic chr15:34611837(-) A-I      intronic chr15:34611808(-) A-I      intronic chr15:34611635(-) A-I      intronic chr15:34541539(-) A-I      intronic chr15:34611493(-) A-I      intronic chr15:34611469(-) A-I      intronic chr15:34538999(-) A-I      intronic chr15:34611434(-) A-I      intronic chr15:34603063(-) A-I      intronic chr15:34599778(-) A-I      intronic chr15:34598097(-) A-I      intronic chr15:34598073(-) A-I      intronic chr15:34598061(-) A-I      intronic chr15:34595051(-) A-I      intronic chr15:34595043(-) A-I      intronic chr15:34595039(-) A-I      intronic chr15:34594852(-) A-I      intronic chr15:34594844(-) A-I      intronic chr15:34594834(-) A-I      intronic chr15:34594833(-) A-I      intronic chr15:34594810(-) A-I      intronic chr15:34594801(-) A-I      intronic chr15:34594784(-) A-I      intronic chr15:34594774(-) A-I      intronic chr15:34594772(-) A-I      intronic chr15:34593999(-) A-I      intronic chr15:34593294(-) A-I      intronic chr15:34593285(-) A-I      intronic chr15:34593217(-) A-I      intronic chr15:34588165(-) A-I      intronic chr15:34588138(-) A-I      intronic chr15:34588119(-) A-I      intronic chr15:34588118(-) A-I      intronic chr15:34588115(-) A-I      intronic chr15:34588089(-) A-I      intronic chr15:34578934(-) A-I      intronic chr15:34578914(-) A-I      intronic chr15:34578889(-) A-I      intronic chr15:34541644(-) A-I      intronic chr15:34562588(-) A-I      intronic chr15:34578830(-) A-I      intronic chr15:34578816(-) A-I      intronic chr15:34578793(-) A-I      intronic chr15:34616032(-) A-I      intronic chr15:34578791(-) A-I      intronic chr15:34578779(-) A-I      intronic chr15:34578778(-) A-I      intronic chr15:34578760(-) A-I      intronic chr15:34578470(-) A-I      intronic chr15:34576740(-) A-I      intronic chr15:34576729(-) A-I      intronic chr15:34576694(-) A-I      intronic chr15:34576693(-) A-I      intronic chr15:34621001(-) A-I      intronic chr15:34576653(-) A-I      intronic chr15:34576057(-) A-I      intronic chr15:34575364(-) A-I      intronic chr15:34575352(-) A-I      intronic chr15:34575299(-) A-I      intronic chr15:34574859(-) A-I      intronic chr15:34574703(-) A-I      intronic chr15:34570975(-) A-I      intronic chr15:34570949(-) A-I      intronic chr15:34570385(-) A-I      intronic chr15:34569585(-) A-I      intronic chr15:34565508(-) A-I      intronic chr15:34562872(-) A-I      intronic chr15:34562856(-) A-I      intronic chr15:34557354(-) A-I      intronic chr15:34557286(-) A-I      intronic chr15:34557240(-) A-I      intronic chr15:34557224(-) A-I      intronic chr15:34557216(-) A-I      intronic chr15:34557208(-) A-I      intronic chr15:34557135(-) A-I      intronic chr15:34539984(-) A-I      intronic chr15:34555370(-) A-I      intronic chr15:34553772(-) A-I      intronic chr15:34553771(-) A-I      intronic chr15:34542357(-) A-I      intronic chr15:34542302(-) A-I      intronic chr15:34542225(-) A-I      intronic chr15:34542182(-) A-I      intronic chr15:34541668(-) A-I      intronic chr15:34541649(-) A-I      intronic chr15:34535276(-) A-I      intronic chr15:34541543(-) A-I      intronic chr15:34541516(-) A-I      intronic chr15:34540148(-) A-I      intronic chr15:34540101(-) A-I      intronic chr15:34540070(-) A-I      intronic chr15:34539656(-) A-I      intronic chr15:34539655(-) A-I      intronic chr15:34539606(-) A-I      intronic chr15:34539599(-) A-I      intronic chr15:34539596(-) A-I      intronic chr15:34539594(-) A-I      intronic chr15:34539529(-) A-I      intronic chr15:34539462(-) A-I      intronic chr15:34539143(-) A-I      intronic chr15:34538959(-) A-I      intronic chr15:34535119(-) A-I      intronic chr15:34562801(-) A-I      intronic chr15:34540081(-) A-I      intronic chr15:34562572(-) A-I      intronic chr15:34578921(-) A-I      intronic chr15:34542352(-) A-I      intronic chr15:34625672(-) A-I      intronic chr15:34576243(-) A-I      intronic chr15:34562968(-) A-I      intronic chr15:34602348(-) A-I      intronic chr15:34570990(-) A-I      intronic chr15:34562759(-) A-I      intronic chr15:34540113(-) A-I      intronic chr15:34611878(-) A-I      intronic chr15:34541761(-) A-I      intronic chr15:34622639(-) A-I      intronic chr15:34538406(-) A-I      intronic chr15:34576203(-) A-I      intronic chr15:34622792(-) A-I      intronic chr15:34527832(-) A-I      intronic chr15:34562800(-) A-I      intronic chr15:34624977(-) A-I      intronic chr15:34585602(-) A-I      intronic chr15:34626163(-) A-I      intronic chr15:34592946(-) A-I      intronic chr15:34624822(-) A-I      intronic chr15:34578950(-) A-I      intronic chr15:34562864(-) A-I      intronic chr15:34611465(-) A-I      intronic chr15:34619851(-) A-I      intronic chr15:34535109(-) A-I      intronic chr15:34541659(-) A-I      intronic chr15:34586558(-) A-I      intronic chr15:34535073(-) A-I      intronic chr15:34623481(-) A-I      intronic chr15:34562580(-) A-I      intronic chr15:34592912(-) A-I      intronic chr15:34562807(-) A-I      intronic chr15:34539071(-) A-I      intronic chr15:34611546(-) A-I      intronic chr15:34622732(-) A-I      intronic chr15:34562445(-) A-I      intronic chr15:34541544(-) A-I      intronic chr15:34626171(-) A-I      intronic chr15:34541737(-) A-I      intronic chr15:34595029(-) A-I      intronic chr15:34574837(-) A-I      intronic chr15:34539998(-) A-I      intronic chr15:34570504(-) A-I      intronic chr15:34571042(-) A-I      intronic chr15:34540108(-) A-I      intronic chr15:34541768(-) A-I      intronic chr15:34558781(-) A-I      intronic chr15:34611615(-) A-I      intronic chr15:34619031(-) A-I      intronic chr15:34559853(-) A-I      intronic chr15:34595089(-) A-I      intronic chr15:34539055(-) A-I      intronic chr15:34622801(-) A-I      intronic chr15:34626113(-) A-I      intronic chr15:34542244(-) A-I      intronic chr15:34541581(-) A-I      intronic chr15:34570912(-) A-I      intronic chr15:34600769(-) A-I      intronic chr15:34626258(-) A-I      intronic chr15:34626079(-) A-I      intronic chr15:34625599(-) A-I      intronic chr15:34625460(-) A-I      intronic chr15:34625429(-) A-I      intronic chr15:34625426(-) A-I      intronic chr15:34624982(-) A-I      intronic chr15:34624937(-) A-I      intronic chr15:34624862(-) A-I      intronic chr15:34623593(-) A-I      intronic chr15:34523963(-) A-I      3'UTR chr15:34523517(-) A-I      3'UTR chr15:34524607(-) A-I      3'UTR chr15:34523560(-) A-I      3'UTR chr15:34523799(-) A-I      3'UTR chr15:34523863(-) A-I      3'UTR chr15:34523873(-) A-I      3'UTR chr15:34523912(-) A-I      3'UTR chr15:34523959(-) A-I      3'UTR chr15:34524621(-) A-I      3'UTR chr15:34524710(-) A-I      3'UTR chr15:34523519(-) A-I      3'UTR chr15:34524606(-) A-I      3'UTR chr15:34524622(-) A-I      3'UTR chr15:34523480(-) A-I      3'UTR chr15:34524521(-) A-I      3'UTR chr15:34524605(-) A-I      3'UTR chr15:34523337(-) A-I      3'UTR chr15:34523524(-) A-I      3'UTR chr15:34523311(-) A-I      3'UTR chr15:34524596(-) A-I      3'UTR chr15:34523525(-) A-I      3'UTR chr15:34523407(-) A-I      3'UTR chr15:34524693(-) A-I      3'UTR chr15:34524540(-) A-I      3'UTR chr15:34523899(-) A-I      3'UTR chr15:34524708(-) A-I      3'UTR chr15:34523401(-) A-I      3'UTR chr15:34524526(-) A-I      3'UTR chr15:34524055(-) A-I      3'UTR chr15:34524072(-) A-I      3'UTR chr15:34523288(-) A-I      3'UTR chr15:34523362(-) A-I      3'UTR chr15:34524076(-) A-I      3'UTR chr15:34523435(-) A-I      3'UTR chr15:34523506(-) A-I      3'UTR chr15:34523972(-) A-I      3'UTR chr15:34524064(-) A-I      3'UTR chr15:34524680(-) A-I      3'UTR chr15:34523974(-) A-I      3'UTR chr15:34524679(-) A-I      3'UTR chr15:34528395(-) A-I      Syn:Gln->Gln chr15:34542378(-) A-I      intronic chr15:34562461(-) A-I      intronic chr15:34541593(-) A-I      intronic chr15:34625705(-) A-I      intronic chr15:34586640(-) A-I      intronic chr15:34574870(-) A-I      intronic chr15:34624901(-) A-I      intronic chr15:34578465(-) A-I      intronic chr15:34623229(-) A-I      intronic chr15:34622831(-) A-I      intronic chr15:34623479(-) A-I      intronic chr15:34540179(-) A-I      intronic chr15:34540077(-) A-I      intronic chr15:34542246(-) A-I      intronic chr15:34625569(-) A-I      intronic chr15:34586651(-) A-I      intronic chr15:34623614(-) A-I      intronic chr15:34626069(-) A-I      intronic chr15:34541558(-) A-I      intronic chr15:34542190(-) A-I      intronic chr15:34553563(-) A-I      intronic chr15:34622783(-) A-I      intronic chr15:34540002(-) A-I      intronic chr15:34562519(-) A-I      intronic chr15:34621995(-) A-I      intronic chr15:34621002(-) A-I      intronic chr15:34541682(-) A-I      intronic chr15:34623505(-) A-I      intronic chr15:34622629(-) A-I      intronic chr15:34540151(-) A-I      intronic chr15:34541681(-) A-I      intronic chr15:34621100(-) A-I      intronic chr15:34624884(-) A-I      intronic chr15:34535131(-) A-I      intronic chr15:34625523(-) A-I      intronic chr15:34618507(-) A-I      intronic chr15:34618984(-) A-I      intronic chr15:34542300(-) A-I      intronic chr15:34598123(-) A-I      intronic chr15:34586095(-) A-I      intronic chr15:34562921(-) A-I      intronic chr15:34576023(-) A-I      intronic chr15:34539960(-) A-I      intronic chr15:34574700(-) A-I      intronic chr15:34562941(-) A-I      intronic chr15:34541660(-) A-I      intronic chr15:34625528(-) A-I      intronic chr15:34625614(-) A-I      intronic chr15:34623217(-) A-I      intronic chr15:34562896(-) A-I      intronic chr15:34542204(-) A-I      intronic chr15:34618459(-) A-I      intronic chr15:34540044(-) A-I      intronic chr15:34540017(-) A-I      intronic chr15:34540197(-) A-I      intronic chr15:34562453(-) A-I      intronic chr15:34571043(-) A-I      intronic chr15:34625493(-) A-I      intronic chr15:34571394(-) A-I      intronic chr15:34569628(-) A-I      intronic chr15:34603072(-) A-I      intronic chr15:34625568(-) A-I      intronic chr15:34562427(-) A-I      intronic chr15:34619783(-) A-I      intronic chr15:34600704(-) A-I      intronic chr15:34623131(-) A-I      intronic chr15:34562587(-) A-I      intronic chr15:34592872(-) A-I      intronic chr15:34625595(-) A-I      intronic chr15:34578813(-) A-I      intronic chr15:34603100(-) A-I      intronic chr15:34558905(-) A-I      intronic chr15:34594901(-) A-I      intronic chr15:34555504(-) A-I      intronic chr15:34541526(-) A-I      intronic chr15:34594728(-) A-I      intronic chr15:34542299(-) A-I      intronic chr15:34619106(-) A-I      intronic chr15:34623517(-) A-I      intronic chr15:34595083(-) A-I      intronic chr15:34562928(-) A-I      intronic chr15:34623501(-) A-I      intronic chr15:34541531(-) A-I      intronic chr15:34562510(-) A-I      intronic chr15:34592755(-) A-I      intronic chr15:34619001(-) A-I      intronic chr15:34562524(-) A-I      intronic chr15:34586984(-) A-I      intronic chr15:34562405(-) A-I      intronic chr15:34624890(-) A-I      intronic chr15:34535042(-) A-I      intronic chr15:34606089(-) A-I      intronic chr15:34585873(-) A-I      intronic chr15:34576768(-) A-I      intronic chr15:34562995(-) A-I      intronic chr15:34593383(-) A-I      intronic chr15:34625704(-) A-I      intronic chr15:34578439(-) A-I      intronic chr15:34611404(-) A-I      intronic chr15:34623105(-) A-I      intronic chr15:34541646(-) A-I      intronic chr15:34626147(-) A-I      intronic chr15:34617784(-) A-I      intronic chr15:34626143(-) A-I      intronic chr15:34573740(-) A-I      intronic chr15:34576746(-) A-I      intronic chr15:34611954(-) A-I      intronic chr15:34576103(-) A-I      intronic chr15:34562511(-) A-I      intronic chr15:34542208(-) A-I      intronic chr15:34626225(-) A-I      intronic chr15:34562558(-) A-I      intronic chr15:34626149(-) A-I      intronic chr15:34606077(-) A-I      intronic chr15:34538923(-) A-I      intronic chr15:34539052(-) A-I      intronic chr15:34574867(-) A-I      intronic chr15:34622623(-) A-I      intronic chr15:34611409(-) A-I      intronic chr15:34622786(-) A-I      intronic chr15:34619110(-) A-I      intronic chr15:34573734(-) A-I      intronic chr15:34625727(-) A-I      intronic chr15:34540087(-) A-I      intronic chr15:34619737(-) A-I      intronic chr15:34562369(-) A-I      intronic chr15:34619037(-) A-I      intronic chr15:34622617(-) A-I      intronic chr15:34576657(-) A-I      intronic chr15:34623478(-) A-I      intronic chr15:34562882(-) A-I      intronic chr15:34611556(-) A-I      intronic chr15:34622701(-) A-I      intronic chr15:34541510(-) A-I      intronic chr15:34559884(-) A-I      intronic chr15:34592966(-) A-I      intronic chr15:34618502(-) A-I      intronic chr15:34576611(-) A-I      intronic chr15:34541686(-) A-I      intronic chr15:34624802(-) A-I      intronic chr15:34541708(-) A-I      intronic chr15:34541594(-) A-I      intronic chr15:34621098(-) A-I      intronic chr15:34574697(-) A-I      intronic chr15:34564380(-) A-I      intronic chr15:34623615(-) A-I      intronic chr15:34573747(-) A-I      intronic chr15:34622691(-) A-I      intronic chr15:34540121(-) A-I      intronic chr15:34539966(-) A-I      intronic chr15:34542194(-) A-I      intronic chr15:34623080(-) A-I      intronic chr15:34558811(-) A-I      intronic chr15:34611749(-) A-I      intronic chr15:34570571(-) A-I      intronic chr15:34622862(-) A-I      intronic chr15:34562480(-) A-I      intronic chr15:34621014(-) A-I      intronic chr15:34625650(-) A-I      intronic chr15:34622864(-) A-I      intronic chr15:34625605(-) A-I      intronic chr15:34558813(-) A-I      intronic chr15:34541656(-) A-I      intronic chr15:34542309(-) A-I      intronic chr15:34562799(-) A-I      intronic chr15:34618990(-) A-I      intronic chr15:34594900(-) A-I      intronic chr15:34592781(-) A-I      intronic chr15:34626235(-) A-I      intronic chr15:34559806(-) A-I      intronic chr15:34618922(-) A-I      intronic chr15:34600623(-) A-I      intronic chr15:34576745(-) A-I      intronic chr15:34562793(-) A-I      intronic chr15:34541700(-) A-I      intronic chr15:34619002(-) A-I      intronic chr15:34561166(-) A-I      intronic chr15:34586070(-) A-I      intronic chr15:34578403(-) A-I      intronic chr15:34535297(-) A-I      intronic chr15:34540178(-) A-I      intronic chr15:34541685(-) A-I      intronic chr15:34542234(-) A-I      intronic chr15:34578885(-) A-I      intronic chr15:34622644(-) A-I      intronic chr15:34570506(-) A-I      intronic chr15:34600660(-) A-I      intronic chr15:34574832(-) A-I      intronic chr15:34611888(-) A-I      intronic chr15:34578413(-) A-I      intronic chr15:34562400(-) A-I      intronic chr15:34561195(-) A-I      intronic chr15:34611616(-) A-I      intronic chr15:34562399(-) A-I      intronic chr15:34541735(-) A-I      intronic chr15:34576074(-) A-I      intronic chr15:34561186(-) A-I      intronic chr15:34538380(-) A-I      intronic chr15:34626109(-) A-I      intronic chr15:34626224(-) A-I      intronic chr15:34539141(-) A-I      intronic chr15:34598083(-) A-I      intronic chr15:34599787(-) A-I      intronic chr15:34540038(-) A-I      intronic chr15:34562966(-) A-I      intronic chr15:34524598(-) A-I      3'UTR chr15:34523414(-) A-I      3'UTR chr15:34524666(-) A-I      3'UTR chr15:34523968(-) A-I      3'UTR chr15:34524593(-) A-I      3'UTR chr15:34523896(-) A-I      3'UTR chr15:34523862(-) A-I      3'UTR chr15:34524702(-) A-I      3'UTR chr15:34523971(-) A-I      3'UTR chr15:34523342(-) A-I      3'UTR chr15:34524505(-) A-I      3'UTR chr15:34524585(-) A-I      3'UTR chr15:34523381(-) A-I      3'UTR chr15:34523985(-) A-I      3'UTR chr15:34523947(-) A-I      3'UTR chr15:34524701(-) A-I      3'UTR chr15:34523966(-) A-I      3'UTR chr15:34523419(-) A-I      3'UTR chr15:34524020(-) A-I      3'UTR chr15:34524525(-) A-I      3'UTR chr15:34524025(-) A-I      3'UTR chr15:34524557(-) A-I      3'UTR chr15:34524545(-) A-I      3'UTR chr15:34523463(-) A-I      3'UTR chr15:34524058(-) A-I      3'UTR chr15:34524550(-) A-I      3'UTR chr15:34523500(-) A-I      3'UTR chr15:34523888(-) A-I      3'UTR chr15:34523501(-) A-I      3'UTR chr15:34523310(-) A-I      3'UTR chr15:34524656(-) A-I      3'UTR chr15:34523867(-) A-I      3'UTR chr15:34523851(-) A-I      3'UTR chr15:34523556(-) A-I      3'UTR chr15:34523813(-) A-I      3'UTR chr15:34523481(-) A-I      3'UTR chr15:34523562(-) A-I      3'UTR chr15:34523516(-) A-I      3'UTR chr15:34523444(-) A-I      3'UTR chr15:34523398(-) A-I      3'UTR chr15:34523923(-) A-I      3'UTR chr15:34524489(-) A-I      3'UTR chr15:34523438(-) A-I      3'UTR chr15:34523476(-) A-I      3'UTR chr15:34523441(-) A-I      3'UTR chr15:34523309(-) A-I      3'UTR chr15:34524028(-) A-I      3'UTR chr15:34524518(-) A-I      3'UTR chr15:34524037(-) A-I      3'UTR chr15:34524608(-) A-I      3'UTR chr15:34523332(-) A-I      3'UTR chr15:34523929(-) A-I      3'UTR chr15:34523958(-) A-I      3'UTR chr15:34524561(-) A-I      3'UTR chr15:34524080(-) A-I      3'UTR chr15:34524177(-) A-I      3'UTR chr15:34523537(-) A-I      3'UTR chr15:34523955(-) A-I      3'UTR chr15:34523887(-) A-I      3'UTR chr15:34524661(-) A-I      3'UTR chr15:34524555(-) A-I      3'UTR chr15:34524602(-) A-I      3'UTR chr15:34524544(-) A-I      3'UTR chr15:34523969(-) A-I      3'UTR chr15:34523297(-) A-I      3'UTR chr15:34523349(-) A-I      3'UTR chr15:34524675(-) A-I      3'UTR chr15:34524599(-) A-I      3'UTR chr15:34524558(-) A-I      3'UTR chr15:34523415(-) A-I      3'UTR chr15:34524063(-) A-I      3'UTR chr15:34523343(-) A-I      3'UTR chr15:34523919(-) A-I      3'UTR chr15:34523451(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC12A6	chr15:34561968(-) A-I intron -    15342557 chr15:34562400(-) A-I intron -    15342557   //22327324 chr15:34562405(-) A-I intron -    15342557 chr15:34562427(-) A-I intron -    15342557 chr15:34562445(-) A-I intron -    15342557 chr15:34562453(-) A-I intron -    15342557 chr15:34562510(-) A-I intron -    15342557 chr15:34562511(-) A-I intron -    15342557 chr15:34562524(-) A-I intron -    15342557 chr15:34562558(-) A-I intron -    15342557 chr15:34562572(-) A-I intron -    15342557 chr15:34562580(-) A-I intron -    15342557 chr15:34562587(-) A-I intron -    15342557 chr15:34562588(-) A-I intron -    15342557 chr15:34562759(-) A-I intron -    15342557 chr15:34562799(-) A-I intron -    15342557 chr15:34562800(-) A-I intron -    15342557 chr15:34562801(-) A-I intron -    15342557 chr15:34562807(-) A-I intron -    15342557 chr15:34562864(-) A-I intron -    15342557 chr15:34562968(-) A-I intron -    15342557 chr15:34523297(-) A-I exon 3'UTR    22327324 chr15:34523309(-) A-I exon 3'UTR    22327324 chr15:34523310(-) A-I exon 3'UTR    22327324 chr15:34523343(-) A-I exon 3'UTR    22327324 chr15:34523851(-) A-I exon 3'UTR    22327324 chr15:34523955(-) A-I exon 3'UTR    22327324 chr15:34524593(-) A-I exon 3'UTR    22327324 chr15:34524656(-) A-I exon 3'UTR    22327324 chr15:34524708(-) A-I exon 3'UTR    21960545   //22327324 chr15:34540044(-) A-I intron -    22327324 chr15:34542204(-) A-I intron -    22327324 chr15:34542208(-) A-I intron -    22327324 chr15:34523519(-) A-I exon 3'UTR    21960545 chr15:34524545(-) A-I exon 3'UTR    21960545 chr15:34524708(-) A-G exon 3'UTR    21725310   //22484847 chr15:34606077(-) A-G intron -    22484847 chr15:34523297(-) A-G exon 3'UTR    22484847 chr15:34523309(-) A-G exon 3'UTR    22484847 chr15:34523310(-) A-G exon 3'UTR    22484847 chr15:34523343(-) A-G exon 3'UTR    22484847 chr15:34523438(-) A-G exon 3'UTR    22484847 chr15:34523480(-) A-G exon 3'UTR    22484847 chr15:34523481(-) A-G exon 3'UTR    22484847 chr15:34523519(-) A-G exon 3'UTR    22484847 chr15:34523556(-) A-G exon 3'UTR    22484847 chr15:34523566(-) T-C exon 3'UTR    22484847 chr15:34523851(-) A-G exon 3'UTR    22484847 chr15:34523867(-) A-G exon 3'UTR    22484847 chr15:34523929(-) A-G exon 3'UTR    22484847 chr15:34523947(-) A-G exon 3'UTR    22484847 chr15:34523955(-) A-G exon 3'UTR    22484847 chr15:34523958(-) A-G exon 3'UTR    22484847 chr15:34523966(-) A-G exon 3'UTR    22484847 chr15:34524020(-) A-G exon 3'UTR    22484847 chr15:34524025(-) A-G exon 3'UTR    22484847 chr15:34524037(-) A-G exon 3'UTR    22484847 chr15:34524063(-) A-G exon 3'UTR    22484847 chr15:34524064(-) A-G exon 3'UTR    22484847 chr15:34524090(-) G-A exon 3'UTR    22484847 chr15:34524518(-) A-G exon 3'UTR    22484847 chr15:34524561(-) A-G exon 3'UTR    22484847 chr15:34524585(-) A-G exon 3'UTR    22484847 chr15:34524593(-) A-G exon 3'UTR    22484847 chr15:34524608(-) A-G exon 3'UTR    22484847 chr15:34524656(-) A-G exon 3'UTR    22484847 chr15:34539984(-) A-G intron -    22484847 chr15:34540044(-) A-G intron -    22484847 chr15:34540113(-) A-G intron -    22484847 chr15:34541526(-) A-G intron -    22484847 chr15:34541594(-) A-G intron -    22484847 chr15:34542204(-) A-G intron -    22484847 chr15:34542208(-) A-G intron -    22484847 chr15:34542309(-) A-G intron -    22484847 chr15:34542352(-) A-G intron -    22484847 chr15:34562400(-) A-G intron -    22484847 chr15:34562405(-) A-G intron -    22484847 chr15:34562524(-) A-G intron -    22484847 chr15:34562558(-) A-G intron -    22484847 chr15:34562587(-) A-G intron -    22484847 chr15:34562807(-) A-G intron -    22484847 chr15:34562882(-) A-G intron -    22484847 chr15:34578403(-) A-G intron -    22484847 chr15:34592912(-) A-G intron -    22484847 chr15:34611749(-) A-G intron -    22484847 chr15:34618984(-) A-G intron -    22484847 chr15:34618990(-) A-G intron -    22484847 chr15:34619001(-) A-G intron -    22484847 chr15:34621002(-) A-G intron -    22484847 chr15:34622783(-) A-G intron -    22484847 chr15:34622786(-) A-G intron -    22484847 chr15:34622792(-) A-G intron -    22484847 chr15:34622831(-) A-G intron -    22484847 chr15:34618502(-) A-G intron -    22484847 chr15:34618507(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC12A6	chr15:34522225-34522226(-) m6A 3'UTR       - chr15:34525493-34525494(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22608085 chr15:34525522-34525523(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22608085 chr15:34525589-34525590(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22575960//22608085 chr15:34525619-34525620(-) m6A 3'UTR       24284625//24981863//28052920//26404942//27773535//22575960//22608085 chr15:34525662-34525663(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085 chr15:34525862-34525863(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22575960//22608085 chr15:34525957-34525958(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22575960//22608085 chr15:34526141-34526142(-) m6A 3'UTR//CDS       24284625//27773535 chr15:34527475-34527476(-) m6A 3'UTR//CDS       27773535//27371828 chr15:34527512-34527513(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828 chr15:34528233-34528234(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828 chr15:34528265-34528266(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528287-34528288(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528294-34528295(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528324-34528325(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528330-34528331(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528377-34528378(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528383-34528384(-) m6A 3'UTR//CDS       24981863//27773535//27371828 chr15:34528915-34528916(-) m6A 3'UTR//CDS       27773535//27371828 chr15:34528925-34528926(-) m6A 3'UTR//CDS       27773535 chr15:34528965-34528966(-) m6A 3'UTR//CDS       27773535 chr15:34529295-34529296(-) m6A exon//intron       27773535 chr15:34553213-34553214(-) m6A 5'UTR//CDS       27773535 chr15:34567561-34567562(-) m6A 5'UTR//CDS//intron       27773535 chr15:34567577-34567578(-) m6A 5'UTR//CDS//intron       27773535 chr15:34567589-34567590(-) m6A 5'UTR//CDS//intron       27773535 chr15:34591828-34591829(-) m6A 5'UTR//intron       27773535 chr15:34610796-34610797(-) m6A CDS//intron       27773535 chr15:34610847-34610848(-) m6A CDS//intron       24981863//27773535//22608085 chr15:34610934-34610935(-) m6A 5'UTR//intron       24981863//27773535//22608085 chr15:34628637-34628638(-) m6A CDS       24981863 chr15:34628721-34628722(-) m6A 5'UTR//CDS       - chr15:34628780-34628781(-) m6A 5'UTR//CDS       27371828 chr15:34628792-34628793(-) m6A 5'UTR//CDS       27371828 chr15:34629061-34629062(-) m6A 5'UTR//intron       24981863 chr15:34629197-34629198(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr15:34629224-34629225(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr15:34629266-34629267(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr15:34629282-34629283(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr15:34629300-34629301(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr15:34629308-34629309(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr15:34629425-34629426(-) m6A 5'UTR//intron       24284625//24209618//24981863//22608085 chr15:34629462-34629463(-) m6A 5'UTR//intron       24284625//24209618//24981863//22608085 chr15:34629488-34629489(-) m6A 5'UTR//intron       24284625//24209618//24981863//22608085 chr15:34629585-34629586(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr15:34629637-34629638(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr15:34629646-34629647(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr15:34629714-34629715(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr15:34629729-34629730(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr15:34629742-34629743(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr15:34629845-34629846(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr15:34629965-34629966(-) m6A 5'UTR//intron       24209618//27371828 chr15:34629983-34629984(-) m6A 5'UTR//intron       24209618//27371828 chr15:34630008-34630009(-) m6A 5'UTR//intron       24209618//27371828 chr15:34630142-34630143(-) m6A 5'UTR//intron       27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-374c-5p	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Fibroblasts|Mesenchymal stem cells     -
	SLC12A6	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-374c-5p
Interactor2: SLC12A6

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.