Basic Information:

  VIRBase ID:  

HHID00073053

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-3609:  MIMAT0017986          XPNPEP3:  NM_022098     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-3609	XPNPEP3
miRBase Accession/Entrez ID	MIMAT0017986	63929
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	APP3//ICP55//NPHPL1

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-3609	rs1201010739 chr7:98881721    C/A rs1379314154 chr7:98881711    G/T rs1433840969 chr7:98881723    G/A rs1360895354 chr7:98881703    A/C rs955400524 chr7:98881707    A/G rs955400524 chr7:98881707    A/T

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	XPNPEP3	chr22:41284435(+) A-I      Syn:Arg->Arg chr22:41323331(+) A-I      3'UTR chr22:41323328(+) A-I      3'UTR chr22:41285553(+) A-I      intronic chr22:41285560(+) A-I      intronic chr22:41285574(+) A-I      intronic chr22:41285576(+) A-I      intronic chr22:41323279(+) A-I      3'UTR chr22:41326833(+) A-I      3'UTR chr22:41285577(+) A-I      intronic chr22:41285582(+) A-I      intronic chr22:41285760(+) A-I      intronic chr22:41323715(+) A-I      3'UTR chr22:41323423(+) A-I      3'UTR chr22:41327614(+) A-I      3'UTR chr22:41327555(+) A-I      3'UTR chr22:41284334(+) A-I      intronic chr22:41284374(+) A-I      intronic chr22:41311458(+) A-I      intronic chr22:41327552(+) A-I      3'UTR chr22:41327553(+) A-I      3'UTR chr22:41327566(+) A-I      3'UTR chr22:41284412(+) A-I      intronic chr22:41327534(+) A-I      3'UTR chr22:41327498(+) A-I      3'UTR chr22:41327468(+) A-I      3'UTR chr22:41326735(+) A-I      3'UTR chr22:41326617(+) A-I      3'UTR chr22:41326372(+) A-I      3'UTR chr22:41325333(+) A-I      3'UTR chr22:41325323(+) A-I      3'UTR chr22:41325282(+) A-I      3'UTR chr22:41325275(+) A-I      3'UTR chr22:41323458(+) A-I      3'UTR chr22:41323318(+) A-I      3'UTR chr22:41324440(+) A-I      3'UTR chr22:41324433(+) A-I      3'UTR chr22:41324432(+) A-I      3'UTR chr22:41323888(+) A-I      3'UTR chr22:41323886(+) A-I      3'UTR chr22:41323722(+) A-I      3'UTR chr22:41323718(+) A-I      3'UTR chr22:41323717(+) A-I      3'UTR chr22:41323676(+) A-I      3'UTR chr22:41264711(+) A-I      intronic chr22:41285174(+) A-I      intronic chr22:41323580(+) A-I      3'UTR chr22:41323585(+) A-I      3'UTR chr22:41323586(+) A-I      3'UTR chr22:41327431(+) A-I      3'UTR chr22:41264730(+) A-I      intronic chr22:41264746(+) A-I      intronic chr22:41323667(+) A-I      3'UTR chr22:41323483(+) A-I      3'UTR chr22:41323480(+) A-I      3'UTR chr22:41323389(+) A-I      3'UTR chr22:41323345(+) A-I      3'UTR chr22:41300886(+) A-I      intronic chr22:41311432(+) A-I      intronic chr22:41311482(+) A-I      intronic chr22:41311526(+) A-I      intronic chr22:41311544(+) A-I      intronic chr22:41312072(+) A-I      intronic chr22:41312087(+) A-I      intronic chr22:41287480(+) A-I      intronic chr22:41316890(+) A-I      intronic chr22:41316874(+) A-I      intronic chr22:41315604(+) A-I      intronic chr22:41315392(+) A-I      intronic chr22:41312095(+) A-I      intronic chr22:41314317(+) A-I      intronic chr22:41287614(+) A-I      intronic chr22:41288269(+) A-I      intronic chr22:41315368(+) A-I      intronic chr22:41297491(+) A-I      intronic chr22:41297500(+) A-I      intronic chr22:41299752(+) A-I      intronic chr22:41299754(+) A-I      intronic chr22:41300467(+) A-I      intronic chr22:41300869(+) A-I      intronic chr22:41269174(+) A-I      intronic chr22:41288306(+) A-I      intronic chr22:41289787(+) A-I      intronic chr22:41300898(+) A-I      intronic chr22:41291420(+) A-I      intronic chr22:41297343(+) A-I      intronic chr22:41291519(+) A-I      intronic chr22:41301106(+) A-I      intronic chr22:41291553(+) A-I      intronic chr22:41315369(+) A-I      intronic chr22:41291554(+) A-I      intronic chr22:41291604(+) A-I      intronic chr22:41301114(+) A-I      intronic chr22:41301301(+) A-I      intronic chr22:41301877(+) A-I      intronic chr22:41260530(+) A-I      intronic chr22:41260532(+) A-I      intronic chr22:41260567(+) A-I      intronic chr22:41260683(+) A-I      intronic chr22:41267784(+) A-I      intronic chr22:41267916(+) A-I      intronic chr22:41269135(+) A-I      intronic chr22:41269160(+) A-I      intronic chr22:41292229(+) A-I      intronic chr22:41269369(+) A-I      intronic chr22:41269652(+) A-I      intronic chr22:41269704(+) A-I      intronic chr22:41271249(+) A-I      intronic chr22:41274010(+) A-I      intronic chr22:41274063(+) A-I      intronic chr22:41274089(+) A-I      intronic chr22:41276734(+) A-I      intronic chr22:41292280(+) A-I      intronic chr22:41292441(+) A-I      intronic chr22:41292487(+) A-I      intronic chr22:41292593(+) A-I      intronic chr22:41296855(+) A-I      intronic chr22:41297339(+) A-I      intronic chr22:41297342(+) A-I      intronic chr22:41311426(+) A-I      intronic chr22:41297368(+) A-I      intronic chr22:41303357(+) A-I      intronic chr22:41278412(+) A-I      intronic chr22:41297469(+) A-I      intronic chr22:41308698(+) A-I      intronic chr22:41310644(+) A-I      intronic chr22:41284420(+) A-I      intronic chr22:41311420(+) A-I      intronic chr22:41311421(+) A-I      intronic chr22:41278440(+) A-I      intronic chr22:41278445(+) A-I      intronic chr22:41278446(+) A-I      intronic chr22:41278455(+) A-I      intronic chr22:41278476(+) A-I      intronic chr22:41279463(+) A-I      intronic chr22:41279467(+) A-I      intronic chr22:41280473(+) A-I      intronic chr22:41280938(+) A-I      intronic chr22:41280952(+) A-I      intronic chr22:41280953(+) A-I      intronic chr22:41282710(+) A-I      intronic chr22:41282737(+) A-I      intronic chr22:41282781(+) A-I      intronic chr22:41284315(+) A-I      intronic chr22:41284365(+) A-I      intronic chr22:41284373(+) A-I      intronic chr22:41284377(+) A-I      intronic chr22:41284486(+) A-I      intronic chr22:41302174(+) A-I      intronic chr22:41302180(+) A-I      intronic chr22:41303304(+) A-I      intronic chr22:41284421(+) A-I      intronic chr22:41284422(+) A-I      intronic chr22:41284495(+) A-I      intronic chr22:41284508(+) A-I      intronic chr22:41285613(+) A-I      intronic chr22:41285651(+) A-I      intronic chr22:41285712(+) A-I      intronic chr22:41286350(+) A-I      intronic chr22:41286613(+) A-I      intronic chr22:41326770(+) A-I      3'UTR chr22:41326674(+) A-I      3'UTR chr22:41326660(+) A-I      3'UTR chr22:41324431(+) A-I      3'UTR chr22:41324274(+) A-I      3'UTR chr22:41327053(+) A-I      3'UTR chr22:41326638(+) A-I      3'UTR chr22:41324226(+) A-I      3'UTR chr22:41323867(+) A-I      3'UTR chr22:41323844(+) A-I      3'UTR chr22:41351350(+) A-I      3'UTR chr22:41327638(+) A-I      3'UTR chr22:41327699(+) A-I      3'UTR chr22:41323829(+) A-I      3'UTR chr22:41323828(+) A-I      3'UTR chr22:41326847(+) A-I      3'UTR chr22:41323820(+) A-I      3'UTR chr22:41323811(+) A-I      3'UTR chr22:41323807(+) A-I      3'UTR chr22:41327042(+) A-I      3'UTR chr22:41327559(+) A-I      3'UTR chr22:41323804(+) A-I      3'UTR chr22:41327082(+) A-I      3'UTR chr22:41327531(+) A-I      3'UTR chr22:41327522(+) A-I      3'UTR chr22:41327503(+) A-I      3'UTR chr22:41325394(+) A-I      3'UTR chr22:41323775(+) A-I      3'UTR chr22:41327567(+) A-I      3'UTR chr22:41325377(+) A-I      3'UTR chr22:41325313(+) A-I      3'UTR chr22:41323772(+) A-I      3'UTR chr22:41325289(+) A-I      3'UTR chr22:41323349(+) A-I      3'UTR chr22:41325276(+) A-I      3'UTR chr22:41325258(+) A-I      3'UTR chr22:41327027(+) A-I      3'UTR chr22:41323764(+) A-I      3'UTR chr22:41327033(+) A-I      3'UTR chr22:41323320(+) A-I      3'UTR chr22:41327561(+) A-I      3'UTR chr22:41327014(+) A-I      3'UTR chr22:41326998(+) A-I      3'UTR chr22:41327454(+) A-I      3'UTR chr22:41324491(+) A-I      3'UTR chr22:41323711(+) A-I      3'UTR chr22:41323692(+) A-I      3'UTR chr22:41323462(+) A-I      3'UTR chr22:41326992(+) A-I      3'UTR chr22:41323384(+) A-I      3'UTR chr22:41326952(+) A-I      3'UTR chr22:41327112(+) A-I      3'UTR chr22:41324458(+) A-I      3'UTR chr22:41323301(+) A-I      3'UTR chr22:41327560(+) A-I      3'UTR chr22:41327678(+) A-I      3'UTR chr22:41325426(+) A-I      3'UTR chr22:41326286(+) A-I      3'UTR chr22:41326356(+) A-I      3'UTR chr22:41326820(+) A-I      3'UTR chr22:41326393(+) A-I      3'UTR chr22:41327050(+) A-I      3'UTR chr22:41326595(+) A-I      3'UTR chr22:41285759(+) A-I      intronic chr22:41313661(+) A-I      intronic chr22:41286368(+) A-I      intronic chr22:41260629(+) A-I      intronic chr22:41278521(+) A-I      intronic chr22:41285646(+) A-I      intronic chr22:41285643(+) A-I      intronic chr22:41307730(+) A-I      intronic chr22:41267890(+) A-I      intronic chr22:41314271(+) A-I      intronic chr22:41301935(+) A-I      intronic chr22:41301245(+) A-I      intronic chr22:41289430(+) A-I      intronic chr22:41285152(+) A-I      intronic chr22:41295920(+) A-I      intronic chr22:41267957(+) A-I      intronic chr22:41287165(+) A-I      intronic chr22:41275481(+) A-I      intronic chr22:41282575(+) A-I      intronic chr22:41284267(+) A-I      intronic chr22:41315375(+) A-I      intronic chr22:41289340(+) A-I      intronic chr22:41285164(+) A-I      intronic chr22:41264675(+) A-I      intronic chr22:41314608(+) A-I      intronic chr22:41264650(+) A-I      intronic chr22:41278377(+) A-I      intronic chr22:41284360(+) A-I      intronic chr22:41306852(+) A-I      intronic chr22:41261381(+) A-I      intronic chr22:41286740(+) A-I      intronic chr22:41269189(+) A-I      intronic chr22:41279518(+) A-I      intronic chr22:41255022(+) A-I      intronic chr22:41287091(+) A-I      intronic chr22:41282574(+) A-I      intronic chr22:41285281(+) A-I      intronic chr22:41314672(+) A-I      intronic chr22:41315281(+) A-I      intronic chr22:41327456(+) A-I      3'UTR chr22:41326816(+) A-I      3'UTR chr22:41326597(+) A-I      3'UTR chr22:41351363(+) A-I      3'UTR chr22:41326395(+) A-I      3'UTR chr22:41324352(+) A-I      3'UTR chr22:41323291(+) A-I      3'UTR chr22:41351291(+) A-I      3'UTR chr22:41323317(+) A-I      3'UTR chr22:41323367(+) A-I      3'UTR chr22:41326994(+) A-I      3'UTR chr22:41323223(+) A-I      3'UTR chr22:41324386(+) A-I      3'UTR chr22:41326812(+) A-I      3'UTR chr22:41326719(+) A-I      3'UTR chr22:41327527(+) A-I      3'UTR chr22:41324473(+) A-I      3'UTR chr22:41323732(+) A-I      3'UTR chr22:41323448(+) A-I      3'UTR chr22:41327536(+) A-I      3'UTR chr22:41326953(+) A-I      3'UTR chr22:41326970(+) A-I      3'UTR chr22:41327113(+) A-I      3'UTR chr22:41323342(+) A-I      3'UTR chr22:41323277(+) A-I      3'UTR chr22:41324420(+) A-I      3'UTR chr22:41351293(+) A-I      3'UTR chr22:41327591(+) A-I      3'UTR chr22:41323714(+) A-I      3'UTR chr17:41301177(+) A-I      intronic chr22:41323205(+) A-I      3'UTR chr22:41326678(+) A-I      3'UTR chr22:41324463(+) A-I      3'UTR chr22:41326978(+) A-I      3'UTR chr22:41326784(+) A-I      3'UTR chr22:41326233(+) A-I      3'UTR chr22:41323615(+) A-I      3'UTR chr22:41323659(+) A-I      3'UTR chr22:41326869(+) A-I      3'UTR chr22:41326825(+) A-I      3'UTR chr22:41326700(+) A-I      3'UTR chr22:41326385(+) A-I      3'UTR chr22:41323781(+) A-I      3'UTR chr22:41323624(+) A-I      3'UTR chr22:41323313(+) A-I      3'UTR chr22:41323443(+) A-I      3'UTR chr22:41323725(+) A-I      3'UTR chr22:41326691(+) A-I      3'UTR chr22:41325295(+) A-I      3'UTR chr22:41323319(+) A-I      3'UTR chr22:41327652(+) A-I      3'UTR chr22:41325469(+) A-I      3'UTR chr22:41323616(+) A-I      3'UTR chr22:41351365(+) A-I      3'UTR chr22:41323800(+) A-I      3'UTR chr22:41325371(+) A-I      3'UTR chr22:41324288(+) A-I      3'UTR chr22:41326677(+) A-I      3'UTR chr22:41326355(+) A-I      3'UTR chr22:41327692(+) A-I      3'UTR chr22:41323357(+) A-I      3'UTR chr22:41326340(+) A-I      3'UTR chr22:41323700(+) A-I      3'UTR chr22:41324290(+) A-I      3'UTR chr22:41323268(+) A-I      3'UTR chr22:41324376(+) A-I      3'UTR chr22:41327571(+) A-I      3'UTR chr22:41326309(+) A-I      3'UTR chr22:41324230(+) A-I      3'UTR chr22:41327460(+) A-I      3'UTR chr22:41324408(+) A-I      3'UTR chr22:41323292(+) A-I      3'UTR chr22:41326238(+) A-I      3'UTR chr22:41326753(+) A-I      3'UTR chr22:41323498(+) A-I      3'UTR chr22:41326371(+) A-I      3'UTR chr22:41327703(+) A-I      3'UTR chr22:41323891(+) A-I      3'UTR chr22:41351366(+) A-I      3'UTR chr22:41323327(+) A-I      3'UTR chr22:41323302(+) A-I      3'UTR chr22:41326703(+) A-I      3'UTR chr22:41327693(+) A-I      3'UTR chr22:41325384(+) A-I      3'UTR chr22:41324479(+) A-I      3'UTR chr22:41324391(+) A-I      3'UTR chr22:41323488(+) A-I      3'UTR chr22:41325325(+) A-I      3'UTR chr22:41327695(+) A-I      3'UTR chr22:41323249(+) A-I      3'UTR chr22:41324341(+) A-I      3'UTR chr22:41327575(+) A-I      3'UTR chr22:41323380(+) A-I      3'UTR chr22:41323698(+) A-I      3'UTR chr22:41323896(+) A-I      3'UTR chr22:41323758(+) A-I      3'UTR chr22:41326704(+) A-I      3'UTR chr22:41326299(+) A-I      3'UTR chr22:41323723(+) A-I      3'UTR chr22:41326251(+) A-I      3'UTR chr22:41325296(+) A-I      3'UTR chr22:41325456(+) A-I      3'UTR chr22:41323699(+) A-I      3'UTR chr22:41326713(+) A-I      3'UTR chr22:41326654(+) A-I      3'UTR chr22:41326834(+) A-I      3'UTR chr22:41325227(+) A-I      3'UTR chr22:41323662(+) A-I      3'UTR chr22:41323428(+) A-I      3'UTR chr22:41327659(+) A-I      3'UTR chr22:41326849(+) A-I      3'UTR chr22:41326208(+) A-I      3'UTR chr22:41324337(+) A-I      3'UTR chr22:41327620(+) A-I      3'UTR chr22:41325217(+) A-I      3'UTR chr22:41327446(+) A-I      3'UTR chr22:41326275(+) A-I      3'UTR chr22:41324310(+) A-I      3'UTR chr22:41323358(+) A-I      3'UTR chr22:41327511(+) A-I      3'UTR chr22:41325376(+) A-I      3'UTR chr22:41323623(+) A-I      3'UTR chr22:41327508(+) A-I      3'UTR chr22:41323419(+) A-I      3'UTR chr22:41323322(+) A-I      3'UTR chr22:41323768(+) A-I      3'UTR chr22:41325378(+) A-I      3'UTR chr22:41327125(+) A-I      3'UTR chr22:41327098(+) A-I      3'UTR chr22:41323222(+) A-I      3'UTR chr22:41327607(+) A-I      3'UTR chr22:41326593(+) A-I      3'UTR chr22:41327532(+) A-I      3'UTR chr22:41323406(+) A-I      3'UTR chr22:41327597(+) A-I      3'UTR chr22:41327643(+) A-I      3'UTR chr22:41326908(+) A-I      3'UTR chr22:41323465(+) A-I      3'UTR chr22:41327062(+) A-I      3'UTR chr22:41326750(+) A-I      3'UTR chr22:41327484(+) A-I      3'UTR chr22:41326273(+) A-I      3'UTR chr22:41325329(+) A-I      3'UTR chr22:41327651(+) A-I      3'UTR chr22:41327603(+) A-I      3'UTR chr22:41326673(+) A-I      3'UTR chr22:41324280(+) A-I      3'UTR chr22:41326715(+) A-I      3'UTR chr22:41326214(+) A-I      3'UTR chr22:41324315(+) A-I      3'UTR chr22:41323390(+) A-I      3'UTR chr22:41324449(+) A-I      3'UTR chr22:41323300(+) A-I      3'UTR chr22:41323690(+) A-I      3'UTR chr22:41264587(+) A-I      intronic chr22:41269734(+) A-I      intronic chr22:41292314(+) A-I      intronic chr22:41295897(+) A-I      intronic chr22:41316356(+) A-I      intronic chr22:41285231(+) A-I      intronic chr22:41292613(+) A-I      intronic chr22:41284483(+) A-I      intronic chr22:41267777(+) A-I      intronic chr22:41302026(+) A-I      intronic chr22:41289800(+) A-I      intronic chr22:41279563(+) A-I      intronic chr22:41284327(+) A-I      intronic chr22:41316331(+) A-I      intronic chr22:41301184(+) A-I      intronic chr22:41289351(+) A-I      intronic chr22:41275534(+) A-I      intronic chr22:41313670(+) A-I      intronic chr22:41263584(+) A-I      intronic chr22:41269636(+) A-I      intronic chr22:41301217(+) A-I      intronic chr22:41307727(+) A-I      intronic chr22:41315639(+) A-I      intronic chr22:41292549(+) A-I      intronic chr22:41282580(+) A-I      intronic chr22:41284413(+) A-I      intronic chr22:41289810(+) A-I      intronic chr22:41285115(+) A-I      intronic chr22:41312176(+) A-I      intronic chr22:41279642(+) A-I      intronic chr22:41289363(+) A-I      intronic chr22:41285264(+) A-I      intronic chr22:41306609(+) A-I      intronic chr22:41312083(+) A-I      intronic chr22:41309264(+) A-I      intronic chr22:41307665(+) A-I      intronic chr22:41281839(+) A-I      intronic chr22:41286296(+) A-I      intronic chr22:41286695(+) A-I      intronic chr22:41285176(+) A-I      intronic chr22:41303971(+) A-I      intronic chr22:41255001(+) A-I      intronic chr22:41296817(+) A-I      intronic chr22:41292588(+) A-I      intronic chr22:41315358(+) A-I      intronic chr22:41284510(+) A-I      intronic chr22:41317457(+) A-I      intronic chr22:41314200(+) A-I      intronic chr22:41295615(+) A-I      intronic chr22:41311477(+) A-I      intronic chr22:41315643(+) A-I      intronic chr22:41297501(+) A-I      intronic chr22:41289328(+) A-I      intronic chr22:41289690(+) A-I      intronic chr22:41275963(+) A-I      intronic chr22:41311507(+) A-I      intronic chr22:41299513(+) A-I      intronic chr22:41310690(+) A-I      intronic chr22:41314353(+) A-I      intronic chr22:41264772(+) A-I      intronic chr22:41286669(+) A-I      intronic chr22:41310704(+) A-I      intronic chr22:41285263(+) A-I      intronic chr22:41282566(+) A-I      intronic chr22:41288288(+) A-I      intronic chr22:41286638(+) A-I      intronic chr22:41277233(+) A-I      intronic chr22:41315407(+) A-I      intronic chr22:41280885(+) A-I      intronic chr22:41287308(+) A-I      intronic chr22:41289867(+) A-I      intronic chr22:41264776(+) A-I      intronic chr22:41280882(+) A-I      intronic chr22:41284348(+) A-I      intronic chr22:41310036(+) A-I      intronic chr22:41286670(+) A-I      intronic chr22:41269721(+) A-I      intronic chr22:41280921(+) A-I      intronic chr22:41288365(+) A-I      intronic chr22:41270665(+) A-I      intronic chr22:41275448(+) A-I      intronic chr22:41286336(+) A-I      intronic chr22:41286791(+) A-I      intronic chr22:41302326(+) A-I      intronic chr22:41260701(+) A-I      intronic chr22:41263620(+) A-I      intronic chr22:41315508(+) A-I      intronic chr22:41284306(+) A-I      intronic chr22:41285114(+) A-I      intronic chr22:41264707(+) A-I      intronic chr22:41264660(+) A-I      intronic chr22:41285161(+) A-I      intronic chr22:41289803(+) A-I      intronic chr22:41314697(+) A-I      intronic chr22:41308819(+) A-I      intronic chr22:41285595(+) A-I      intronic chr22:41315605(+) A-I      intronic chr22:41284296(+) A-I      intronic chr22:41292307(+) A-I      intronic chr22:41289434(+) A-I      intronic chr22:41284317(+) A-I      intronic chr22:41260576(+) A-I      intronic chr22:41286337(+) A-I      intronic chr22:41269698(+) A-I      intronic chr22:41307602(+) A-I      intronic chr22:41311478(+) A-I      intronic chr22:41285104(+) A-I      intronic chr22:41285180(+) A-I      intronic chr22:41269681(+) A-I      intronic chr22:41284437(+) A-I      NonSyn:Gln->Arg

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	XPNPEP3	chr22:41323207(+) A-I exon 3'UTR    15342557 chr22:41323223(+) A-I exon 3'UTR    15342557 chr22:41323249(+) A-I exon 3'UTR    15342557   //15258596 chr22:41323268(+) A-I exon 3'UTR    15258596 chr22:41323291(+) A-I exon 3'UTR    15258596 chr22:41323292(+) A-I exon 3'UTR    15258596 chr22:41323317(+) A-I exon 3'UTR    15258596 chr22:41323347(+) A-I exon 3'UTR    15258596 chr22:41323357(+) A-I exon 3'UTR    15258596 chr22:41323358(+) A-I exon 3'UTR    15258596   //21960545   //22327324 chr22:41323398(+) A-I exon 3'UTR    15258596 chr22:41323399(+) A-I exon 3'UTR    15258596 chr22:41323465(+) A-I exon 3'UTR    15258596   //22327324 chr22:41323616(+) A-I exon 3'UTR    15258596   //21960545 chr22:41323689(+) A-I exon 3'UTR    15258596 chr22:41323698(+) A-I exon 3'UTR    15258596 chr22:41323699(+) A-I exon 3'UTR    15258596 chr22:41323700(+) A-I exon 3'UTR    15258596 chr22:41324297(+) A-I exon 3'UTR    15342557 chr22:41324310(+) A-I exon 3'UTR    15342557 chr22:41324336(+) A-I exon 3'UTR    15342557 chr22:41324337(+) A-I exon 3'UTR    15342557   //22327324 chr22:41324341(+) A-I exon 3'UTR    15342557 chr22:41324400(+) A-I exon 3'UTR    15342557 chr22:41326275(+) A-I exon 3'UTR    15342557 chr22:41326315(+) A-I exon 3'UTR    15342557 chr22:41326340(+) A-I exon 3'UTR    15342557 chr22:41326344(+) A-I exon 3'UTR    15342557 chr22:41326593(+) A-I exon 3'UTR    15342557 chr22:41326673(+) A-I exon 3'UTR    15342557 chr22:41326704(+) A-I exon 3'UTR    15342557 chr22:41326825(+) A-I exon 3'UTR    15342557   //22327324 chr22:41326956(+) A-I exon 3'UTR    15258596 chr22:41326970(+) A-I exon 3'UTR    15258596 chr22:41326978(+) A-I exon 3'UTR    15258596 chr22:41326994(+) A-I exon 3'UTR    15258596 chr22:41327098(+) A-I exon 3'UTR    15342557 chr22:41327456(+) A-I exon 3'UTR    15342557   //15258596   //21960545   //22327324 chr22:41327460(+) A-I exon 3'UTR    15342557   //15258596   //21960545   //22327324 chr22:41327527(+) A-I exon 3'UTR    15342557   //21960545 chr22:41327575(+) A-I exon 3'UTR    15342557 chr22:41327595(+) A-I exon 3'UTR    15342557   //22327324 chr22:41327597(+) A-I exon 3'UTR    15342557 chr22:41327607(+) A-I exon 3'UTR    15342557 chr22:41327611(+) A-I exon 3'UTR    15342557 chr22:41327620(+) A-I exon 3'UTR    15342557 chr22:41327643(+) A-I exon 3'UTR    15342557 chr22:41327695(+) A-I exon 3'UTR    15342557 chr22:41324288(+) A-I intron -    21960545   //22327324 chr22:41324315(+) A-I intron -    22327324 chr22:41324479(+) A-I intron -    22327324 chr22:41327113(+) A-I intron -    22327324 chr22:41323367(+) A-I intron -    21960545 chr22:41323623(+) A-I intron -    21960545 chr22:41327536(+) A-I intron -    21960545 chr22:41323623(+) A-G intron -    21725310 chr22:41323772(+) A-G intron -    21725310 chr22:41282580(+) A-G intron -    22484847 chr22:41284360(+) A-G intron -    22484847 chr22:41285104(+) A-G intron -    22484847 chr22:41285231(+) A-G intron -    22484847 chr22:41285595(+) A-G intron -    22484847 chr22:41311478(+) A-G intron -    22484847 chr22:41323205(+) A-G intron -    22484847 chr22:41323223(+) A-G intron -    22484847 chr22:41323291(+) A-G intron -    22484847 chr22:41323292(+) A-G intron -    22484847 chr22:41323317(+) A-G intron -    22484847 chr22:41323357(+) A-G intron -    22484847 chr22:41323358(+) A-G intron -    22484847 chr22:41323465(+) A-G intron -    22484847 chr22:41323732(+) A-G intron -    22484847 chr22:41324280(+) A-G intron -    22484847 chr22:41324400(+) A-G intron -    22484847 chr22:41324463(+) A-G intron -    22484847 chr22:41324479(+) A-G intron -    22484847 chr22:41325295(+) A-G intron -    22484847 chr22:41325406(+) A-G intron -    22484847 chr22:41326238(+) A-G intron -    22484847 chr22:41326251(+) A-G intron -    22484847 chr22:41326407(+) A-G intron -    22484847 chr22:41326593(+) A-G intron -    22484847 chr22:41326654(+) A-G intron -    22484847 chr22:41326678(+) A-G intron -    22484847 chr22:41327446(+) A-G intron -    22484847 chr22:41327456(+) A-G intron -    22484847 chr22:41327460(+) A-G intron -    22484847 chr22:41327484(+) A-G intron -    22484847 chr22:41327527(+) A-G intron -    22484847 chr22:41327536(+) A-G intron -    22484847 chr22:41327591(+) A-G intron -    22484847 chr22:41327595(+) A-G intron -    22484847 chr22:41327597(+) A-G intron -    22484847 chr22:41327603(+) A-G intron -    22484847 chr22:41327607(+) A-G intron -    22484847 chr22:41327611(+) A-G intron -    22484847 chr22:41327620(+) A-G intron -    22484847 chr22:41327643(+) A-G intron -    22484847 chr22:41327651(+) A-G intron -    22484847 chr22:41327693(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	XPNPEP3	chr22:41257711-41257712(+) m6A exon//intron       24981863 chr22:41258737-41258738(+) m6A exon//intron       - chr22:41265065-41265066(+) m6A CDS//exon       - chr22:41265114-41265115(+) m6A CDS//exon       - chr22:41266081-41266082(+) m6A 3'UTR//exon//intron       - chr22:41277789-41277790(+) m6A 3'UTR//CDS//exon       22608085 chr22:41277819-41277820(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr22:41277825-41277826(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr22:41277868-41277869(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr22:41277877-41277878(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr22:41277944-41277945(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr22:41278017-41278018(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr22:41278074-41278075(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr22:41322362-41322363(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr22:41322386-41322387(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr22:41322414-41322415(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr22:41324839-41324840(+) m6A 3'UTR       24981863 chr22:41324862-41324863(+) m6A 3'UTR       24981863 chr22:41324877-41324878(+) m6A 3'UTR       24981863 chr22:41325585-41325586(+) Y 3'UTR//intron       26075521 chr22:41327919-41327920(+) m6A 3'UTR       24981863 chr22:41327928-41327929(+) m6A 3'UTR       24981863 chr22:41327942-41327943(+) m6A 3'UTR       24981863 chr22:41327960-41327961(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-3609	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Colon cancer cell line (LIM1863)     -
	XPNPEP3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-3609
Interactor2: XPNPEP3

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.