Detail Information

Basic Information:


  VIRBase ID:  

HHID00072980

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-3607-3p LONP2
miRBase
Accession/Entrez ID		 MIMAT0017985 83752
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - LONP//LONPL//PLON//PSLON

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LONP2
chr16:48387231(+) A-I      3'UTR
chr16:48387210(+) A-I      3'UTR
chr16:48350337(+) A-I      intronic
chr16:48380639(+) A-I      intronic
chr16:48386346(+) A-I      3'UTR
chr16:48386392(+) A-I      3'UTR
chr16:48386441(+) A-I      3'UTR
chr16:48386337(+) A-I      3'UTR
chr16:48350338(+) A-I      intronic
chr16:48388359(+) A-I      3'UTR
chr16:48350367(+) A-I      intronic
chr16:48386457(+) A-I      3'UTR
chr16:48387263(+) A-I      3'UTR
chr16:48386465(+) A-I      3'UTR
chr16:48388213(+) A-I      3'UTR
chr16:48388198(+) A-I      3'UTR
chr16:48388222(+) A-I      3'UTR
chr16:48350331(+) A-I      intronic
chr16:48386486(+) A-I      3'UTR
chr16:48387180(+) A-I      3'UTR
chr16:48387254(+) A-I      3'UTR
chr16:48386430(+) A-I      3'UTR
chr16:48387240(+) A-I      3'UTR
chr16:48387197(+) A-I      3'UTR
chr16:48387194(+) A-I      3'UTR
chr16:48350312(+) A-I      intronic
chr16:48350060(+) A-I      intronic
chr16:48350048(+) A-I      intronic
chr16:48350036(+) A-I      intronic
chr16:48386447(+) A-I      3'UTR
chr16:48328579(+) A-I      intronic
chr16:48328578(+) A-I      intronic
chr16:48328570(+) A-I      intronic
chr16:48328556(+) A-I      intronic
chr16:48328493(+) A-I      intronic
chr16:48328117(+) A-I      intronic
chr16:48328052(+) A-I      intronic
chr16:48328049(+) A-I      intronic
chr16:48284160(+) A-I      intronic
chr16:48354931(+) A-I      intronic
chr16:48350068(+) A-I      intronic
chr16:48350058(+) A-I      intronic
chr16:48349937(+) A-I      intronic
chr16:48345672(+) A-I      intronic
chr16:48366249(+) A-I      intronic
chr16:48339400(+) A-I      intronic
chr16:48339363(+) A-I      intronic
chr16:48339346(+) A-I      intronic
chr16:48338570(+) A-I      intronic
chr16:48338547(+) A-I      intronic
chr16:48338455(+) A-I      intronic
chr16:48362139(+) A-I      intronic
chr16:48362119(+) A-I      intronic
chr16:48361603(+) A-I      intronic
chr16:48361578(+) A-I      intronic
chr16:48361424(+) A-I      intronic
chr16:48338454(+) A-I      intronic
chr16:48365593(+) A-I      intronic
chr16:48338453(+) A-I      intronic
chr16:48366301(+) A-I      intronic
chr16:48371764(+) A-I      intronic
chr16:48371792(+) A-I      intronic
chr16:48371843(+) A-I      intronic
chr16:48371980(+) A-I      intronic
chr16:48372806(+) A-I      intronic
chr16:48378658(+) A-I      intronic
chr16:48378949(+) A-I      intronic
chr16:48379011(+) A-I      intronic
chr16:48379038(+) A-I      intronic
chr16:48380807(+) A-I      intronic
chr16:48380842(+) A-I      intronic
chr16:48380944(+) A-I      intronic
chr16:48338386(+) A-I      intronic
chr16:48333246(+) A-I      intronic
chr16:48333071(+) A-I      intronic
chr16:48362202(+) A-I      intronic
chr16:48362201(+) A-I      intronic
chr16:48331737(+) A-I      intronic
chr16:48331685(+) A-I      intronic
chr16:48329176(+) A-I      intronic
chr16:48329172(+) A-I      intronic
chr16:48329136(+) A-I      intronic
chr16:48329132(+) A-I      intronic
chr16:48329124(+) A-I      intronic
chr16:48329121(+) A-I      intronic
chr16:48329118(+) A-I      intronic
chr16:48329112(+) A-I      intronic
chr16:48338395(+) A-I      intronic
chr16:48355030(+) A-I      intronic
chr16:48388285(+) A-I      3'UTR
chr16:48388391(+) A-I      3'UTR
chr16:48388280(+) A-I      3'UTR
chr16:48386286(+) A-I      3'UTR
chr16:48388293(+) A-I      3'UTR
chr16:48387412(+) A-I      3'UTR
chr16:48388320(+) A-I      3'UTR
chr16:48387408(+) A-I      3'UTR
chr16:48387305(+) A-I      3'UTR
chr16:48388229(+) A-I      3'UTR
chr16:48386307(+) A-I      3'UTR
chr16:48388223(+) A-I      3'UTR
chr16:48386332(+) A-I      3'UTR
chr16:48387365(+) A-I      3'UTR
chr16:48386360(+) A-I      3'UTR
chr16:48388342(+) A-I      3'UTR
chr16:48388174(+) A-I      3'UTR
chr16:48387360(+) A-I      3'UTR
chr16:48386376(+) A-I      3'UTR
chr16:48388255(+) A-I      3'UTR
chr16:48386369(+) A-I      3'UTR
chr16:48387221(+) A-I      3'UTR
chr16:48387409(+) A-I      3'UTR
chr16:48379971(+) A-I      intronic
chr16:48328550(+) A-I      intronic
chr16:48372654(+) A-I      intronic
chr16:48371853(+) A-I      intronic
chr16:48383275(+) A-I      intronic
chr16:48357288(+) A-I      intronic
chr16:48330438(+) A-I      intronic
chr16:48383324(+) A-I      intronic
chr16:48329074(+) A-I      intronic
chr16:48380974(+) A-I      intronic
chr16:48328616(+) A-I      intronic
chr16:48356530(+) A-I      intronic
chr16:48328443(+) A-I      intronic
chr16:48372705(+) A-I      intronic
chr16:48380626(+) A-I      intronic
chr16:48367513(+) A-I      intronic
chr16:48380806(+) A-I      intronic
chr16:48384152(+) A-I      intronic
chr16:48361430(+) A-I      intronic
chr16:48328005(+) A-I      intronic
chr16:48377488(+) A-I      intronic
chr16:48355070(+) A-I      intronic
chr16:48330517(+) A-I      intronic
chr16:48378584(+) A-I      intronic
chr16:48327951(+) A-I      intronic
chr16:48371939(+) A-I      intronic
chr16:48374669(+) A-I      intronic
chr16:48378878(+) A-I      intronic
chr16:48330499(+) A-I      intronic
chr16:48383347(+) A-I      intronic
chr16:48339266(+) A-I      intronic
chr16:48332866(+) A-I      intronic
chr16:48328041(+) A-I      intronic
chr16:48327993(+) A-I      intronic
chr16:48372698(+) A-I      intronic
chr16:48328035(+) A-I      intronic
chr16:48371954(+) A-I      intronic
chr16:48387246(+) A-I      3'UTR
chr16:48387258(+) A-I      3'UTR
chr16:48387239(+) A-I      3'UTR
chr16:48387410(+) A-I      3'UTR
chr16:48386466(+) A-I      3'UTR
chr16:48387398(+) A-I      3'UTR
chr16:48386295(+) A-I      3'UTR
chr16:48388193(+) A-I      3'UTR
chr16:48387264(+) A-I      3'UTR
chr16:48387255(+) A-I      3'UTR
chr16:48388300(+) A-I      3'UTR
chr16:48387215(+) A-I      3'UTR
chr16:48388367(+) A-I      3'UTR
chr16:48386370(+) A-I      3'UTR
chr16:48387189(+) A-I      3'UTR
chr16:48388199(+) A-I      3'UTR
chr16:48387259(+) A-I      3'UTR
chr16:48388180(+) A-I      3'UTR
chr16:48386378(+) A-I      3'UTR
chr16:48386354(+) A-I      3'UTR
chr16:48387265(+) A-I      3'UTR
chr16:48386442(+) A-I      3'UTR
chr16:48388340(+) A-I      3'UTR
chr16:48387162(+) A-I      3'UTR
chr16:48386359(+) A-I      3'UTR
chr16:48387261(+) A-I      3'UTR
chr16:48379012(+) A-I      intronic
chr16:48380627(+) A-I      intronic
chr16:48339413(+) A-I      intronic
chr16:48366776(+) A-I      intronic
chr16:48380800(+) A-I      intronic
chr16:48333317(+) A-I      intronic
chr16:48331064(+) A-I      intronic
chr16:48338450(+) A-I      intronic
chr16:48327062(+) A-I      intronic
chr16:48301644(+) A-I      intronic
chr16:48339349(+) A-I      intronic
chr16:48332871(+) A-I      intronic
chr16:48366484(+) A-I      intronic
chr16:48372672(+) A-I      intronic
chr16:48338459(+) A-I      intronic
chr16:48384147(+) A-I      intronic
chr16:48354914(+) A-I      intronic
chr16:48288354(+) A-I      intronic
chr16:48382579(+) A-I      intronic
chr16:48339295(+) A-I      intronic
chr16:48371940(+) A-I      intronic
chr16:48371871(+) A-I      intronic
chr16:48327987(+) A-I      intronic
chr16:48383276(+) A-I      intronic
chr16:48362524(+) A-I      intronic
chr16:48327948(+) A-I      intronic
chr16:48371850(+) A-I      intronic
chr16:48377354(+) A-I      intronic
chr16:48371981(+) A-I      intronic
chr16:48378714(+) A-I      intronic
chr16:48339355(+) A-I      intronic
chr16:48354915(+) A-I      intronic
chr16:48371915(+) A-I      intronic
chr16:48339394(+) A-I      intronic
chr16:48338439(+) A-I      intronic
chr16:48384144(+) A-I      intronic
chr16:48332865(+) A-I      intronic
chr16:48372564(+) A-I      intronic
chr16:48361495(+) A-I      intronic
chr16:48327989(+) A-I      intronic
chr16:48366698(+) A-I      intronic
chr16:48328630(+) A-I      intronic
chr16:48372761(+) A-I      intronic
chr16:48327917(+) A-I      intronic
chr16:48338376(+) A-I      intronic
chr16:48371855(+) A-I      intronic
chr16:48330485(+) A-I      intronic
chr16:48372640(+) A-I      intronic
chr16:48287239(+) A-I      intronic
chr16:48380600(+) A-I      intronic
chr16:48372572(+) A-I      intronic
chr16:48354957(+) A-I      intronic
chr16:48383348(+) A-I      intronic
chr16:48333373(+) A-I      intronic
chr16:48378885(+) A-I      intronic
chr16:48366699(+) A-I      intronic
chr16:48338424(+) A-I      intronic
chr16:48328032(+) A-I      intronic
chr16:48366585(+) A-I      intronic
chr16:48328595(+) A-I      intronic
chr16:48328421(+) A-I      intronic
chr16:48374682(+) A-I      intronic
chr16:48380599(+) A-I      intronic
chr16:48371794(+) A-I      intronic
chr16:48372617(+) A-I      intronic
chr16:48371918(+) A-I      intronic
chr16:48366232(+) A-I      intronic
chr16:48281816(+) A-I      intronic
chr16:48371786(+) A-I      intronic
chr16:48377482(+) A-I      intronic
chr16:48328530(+) A-I      intronic
chr16:48353249(+) A-I      intronic
chr16:48338504(+) A-I      intronic
chr16:48332941(+) A-I      intronic
chr16:48374951(+) A-I      intronic
chr16:48372721(+) A-I      intronic
chr16:48383235(+) A-I      intronic
chr16:48355892(+) A-I      intronic
chr16:48371756(+) A-I      intronic
chr16:48355048(+) A-I      intronic
chr16:48380633(+) A-I      intronic
chr16:48366458(+) A-I      intronic
chr16:48328408(+) A-I      intronic
chr16:48383895(+) A-I      intronic
chr16:48380645(+) A-I      intronic
chr16:48383246(+) A-I      intronic
chr16:48338405(+) A-I      intronic
chr16:48367507(+) A-I      intronic
chr16:48372704(+) A-I      intronic
chr16:48283532(+) A-I      intronic
chr16:48338341(+) A-I      intronic
chr16:48328610(+) A-I      intronic
chr16:48365749(+) A-I      intronic
chr16:48354884(+) A-I      intronic
chr16:48355957(+) A-I      intronic
chr16:48372769(+) A-I      intronic
chr16:48377348(+) A-I      intronic
chr16:48380823(+) A-I      intronic
chr16:48374681(+) A-I      intronic
chr16:48374755(+) A-I      intronic
chr16:48328476(+) A-I      intronic
chr16:48384041(+) A-I      intronic
chr16:48281804(+) A-I      intronic
chr16:48380617(+) A-I      intronic
chr16:48362546(+) A-I      intronic
chr16:48377355(+) A-I      intronic
chr16:48333378(+) A-I      intronic
chr16:48342903(+) A-I      intronic
chr16:48352816(+) A-I      intronic
chr16:48328491(+) A-I      intronic
chr16:48352860(+) A-I      intronic
chr16:48343384(+) A-I      intronic
chr16:48381016(+) A-I      intronic
chr16:48379835(+) A-I      intronic
chr16:48352817(+) A-I      intronic
chr16:48366225(+) A-I      intronic
chr16:48352802(+) A-I      intronic
chr16:48352005(+) A-I      intronic
chr16:48372768(+) A-I      intronic
chr16:48378657(+) A-I      intronic
chr16:48339229(+) A-I      intronic
chr16:48332932(+) A-I      intronic
chr16:48331643(+) A-I      intronic
chr16:48372563(+) A-I      intronic
chr16:48333238(+) A-I      intronic
chr16:48352001(+) A-I      intronic
chr16:48352040(+) A-I      intronic
chr16:48388245(+) A-I      3'UTR
chr16:48387310(+) A-I      3'UTR
chr16:48386490(+) A-I      3'UTR
chr16:48387355(+) A-I      3'UTR
chr16:48388341(+) A-I      3'UTR
chr16:48386425(+) A-I      3'UTR
chr16:48388248(+) A-I      3'UTR
chr16:48386347(+) A-I      3'UTR
chr16:48387238(+) A-I      3'UTR
chr16:48388183(+) A-I      3'UTR
chr16:48387354(+) A-I      3'UTR
chr16:48388244(+) A-I      3'UTR
chr16:48386454(+) A-I      3'UTR
chr16:48387350(+) A-I      3'UTR
chr16:48387301(+) A-I      3'UTR
chr16:48387266(+) A-I      3'UTR
chr16:48387143(+) A-I      3'UTR
chr16:48388354(+) A-I      3'UTR
chr16:48388317(+) A-I      3'UTR
chr16:48388305(+) A-I      3'UTR
chr16:48388355(+) A-I      3'UTR
chr16:48387296(+) A-I      3'UTR
chr16:48387346(+) A-I      3'UTR
chr16:48388381(+) A-I      3'UTR
chr16:48387207(+) A-I      3'UTR
chr16:48387421(+) A-I      3'UTR
chr16:48387267(+) A-I      3'UTR
chr16:48386328(+) A-I      3'UTR
chr16:48387161(+) A-I      3'UTR
chr16:48388380(+) A-I      3'UTR
chr16:48387202(+) A-I      3'UTR
chr16:48386470(+) A-I      3'UTR
chr16:48388348(+) A-I      3'UTR
chr16:48387257(+) A-I      3'UTR
chr16:48387413(+) A-I      3'UTR
chr16:48388383(+) A-I      3'UTR
chr16:48388258(+) A-I      3'UTR
chr16:48388218(+) A-I      3'UTR
chr16:48388236(+) A-I      3'UTR
chr16:48387411(+) A-I      3'UTR
chr16:48387286(+) A-I      3'UTR
chr16:48388219(+) A-I      3'UTR
chr16:48387270(+) A-I      3'UTR
chr16:48388309(+) A-I      3'UTR
chr16:48386301(+) A-I      3'UTR
chr16:48388394(+) A-I      3'UTR
chr16:48388396(+) A-I      3'UTR
chr16:48388403(+) A-I      3'UTR
chr16:48387216(+) A-I      3'UTR
chr16:48387153(+) A-I      3'UTR
chr16:48388356(+) A-I      3'UTR
chr16:48388329(+) A-I      3'UTR
chr16:48386411(+) A-I      3'UTR
chr16:48386355(+) A-I      3'UTR
chr16:48388271(+) A-I      3'UTR
chr16:48387252(+) A-I      3'UTR
chr16:48387179(+) A-I      3'UTR
chr16:48388412(+) A-I      3'UTR
chr16:48388274(+) A-I      3'UTR
chr16:48386302(+) A-I      3'UTR
chr16:48386424(+) A-I      3'UTR
chr16:48388382(+) A-I      3'UTR
chr16:48387428(+) A-I      3'UTR
chr16:48386293(+) A-I      3'UTR
chr16:48388284(+) A-I      3'UTR
chr16:48388303(+) A-I      3'UTR
chr16:48387201(+) A-I      3'UTR
chr16:48386453(+) A-I      3'UTR
chr16:48388260(+) A-I      3'UTR
chr16:48387278(+) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED LONP2
chr16:48386295(+) A-I exon 3'UTR    15258596
chr16:48386302(+) A-I exon 3'UTR    15258596
chr16:48386424(+) A-I exon 3'UTR    15258596

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LONP2
chr16:48278399-48278400(+) m6A CDS       22575960
chr16:48286190-48286191(+) m6A CDS       -
chr16:48292587-48292588(+) m6A CDS       24981863
chr16:48292618-48292619(+) m6A CDS       24981863
chr16:48292626-48292627(+) m6A CDS       24981863
chr16:48295445-48295446(+) m6A CDS       24981863//26404942
chr16:48296688-48296689(+) m6A CDS//intron       24981863
chr16:48304114-48304115(+) m6A 3'UTR//CDS       22575960
chr16:48304179-48304180(+) m6A 3'UTR//CDS       22575960
chr16:48337121-48337122(+) m6A 3'UTR//CDS       22575960
chr16:48337166-48337167(+) m6A 3'UTR//CDS       22575960
chr16:48337189-48337190(+) m6A 3'UTR//CDS       24981863
chr16:48368136-48368137(+) m6A 3'UTR//CDS       24981863
chr16:48385507-48385508(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085
chr16:48385535-48385536(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085
chr16:48385573-48385574(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085
chr16:48385680-48385681(+) m6A 3'UTR//CDS//exon//intron       24284625
chr16:48385685-48385686(+) m6A 3'UTR//CDS//exon//intron       24284625
chr16:48385706-48385707(+) m6A 3'UTR//CDS//exon//intron       24284625
chr16:48386079-48386080(+) m6A 3'UTR//intron       24981863
chr16:48386139-48386140(+) m6A 3'UTR//intron       24981863//22608085
chr16:48386152-48386153(+) m6A 3'UTR//intron       24981863//22608085
chr16:48386198-48386199(+) m6A 3'UTR//intron       22608085
chr16:48386216-48386217(+) m6A 3'UTR//intron       22608085
chr16:48386356-48386357(+) m6A 3'UTR//intron       24284625//24981863//22608085
chr16:48386377-48386378(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085
chr16:48386465-48386466(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr16:48386534-48386535(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr16:48386554-48386555(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr16:48386564-48386565(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr16:48386631-48386632(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr16:48386862-48386863(+) m6A 3'UTR//intron       24284625//24981863//22608085
chr16:48386921-48386922(+) m6A 3'UTR//intron       24284625//24981863//22608085
chr16:48387054-48387055(+) m6A 3'UTR//intron       24981863
chr16:48388341-48388342(+) m6A 3'UTR//intron       -
chr16:48388443-48388444(+) m6A 3'UTR//intron       -
chr16:48388449-48388450(+) m6A 3'UTR//intron       -
chr16:48388496-48388497(+) m6A 3'UTR//intron       -
chr16:48395420-48395421(+) m6A exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr16:48395447-48395448(+) m6A exon//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr16:48395460-48395461(+) m6A exon//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr16:48395566-48395567(+) m6A exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48395571-48395572(+) m6A exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48395726-48395727(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr16:48395764-48395765(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48395787-48395788(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48395792-48395793(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48395848-48395849(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr16:48395879-48395880(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr16:48395955-48395956(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr16:48395972-48395973(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr16:48396123-48396124(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48396157-48396158(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48396211-48396212(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48396216-48396217(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48396228-48396229(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48396291-48396292(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr16:48396571-48396572(+) m6A 3'UTR//exon       22608085
chr16:48396580-48396581(+) m6A 3'UTR//exon       22608085
chr16:48396604-48396605(+) m6A 3'UTR//exon       22608085
chr16:48396640-48396641(+) m6A 3'UTR//exon       22608085
chr16:48396647-48396648(+) m6A 3'UTR//exon       22608085
chr16:48396659-48396660(+) m6A 3'UTR       22608085
chr16:48396671-48396672(+) m6A 3'UTR       22608085
chr16:48396702-48396703(+) m6A 3'UTR       22608085
chr16:48396780-48396781(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-3607-3p
Exosome Plasma     23663360
Exosome B cell lymphoma cell lines|EBV-transformed lymphoblastoid B cells     25242326
Microvesicle Fibroblasts|Mesenchymal stem cells     -
LONP2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus K562 cells     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem
ID		 Function Link  
RNAInter hsa-miR-3607-3p
Gemcitabine 60750 Drug interaction    RC00008306
5-Fluorouracil 3385 Drug interaction    RC00008305
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00008304
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719 Drug interaction    RC00008307
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-3607-3p
N-(3-(5-Chloro-1H-pyrrolo[2,3-b]pyridine-3-carbonyl)-2,4-difluorophenyl)propane-1-sulfonamide 24180719       26456124

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-3607-3p
Interactor2: LONP2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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