Basic Information:

  VIRBase ID:  

HHID00072663

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-3179:  MIMAT0015056          SOGA1:  NM_199181     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-3179	SOGA1
miRBase Accession/Entrez ID	MIMAT0015056	140710
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf117//KIAA0889//SOGA

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-3179	rs1229893475 chr16:14901579    G/A rs1340262765 chr16:14901578    C/T rs1351100204 chr16:14901559    A/G rs1555527332 chr16:16300220    A/T rs1398613616 chr16:14901562    A/G rs1555527331 chr16:16300216    G/A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SOGA1	chr20:35477699(-) A-I      intronic chr20:35477642(-) A-I      intronic chr20:35477635(-) A-I      intronic chr20:35424092(-) A-I      intronic chr20:35417386(-) A-I      intronic chr20:35417382(-) A-I      intronic chr20:35416469(-) A-I      intronic chr20:35416165(-) A-I      intronic chr20:35416159(-) A-I      intronic chr20:35416154(-) A-I      intronic chr20:35416151(-) A-I      intronic chr20:35416145(-) A-I      intronic chr20:35478711(-) A-I      intronic chr20:35475313(-) A-I      intronic chr20:35468330(-) A-I      intronic chr20:35424097(-) A-I      intronic chr20:35411107(-) A-I      3'UTR chr20:35415882(-) A-I      intronic chr20:35415807(-) A-I      intronic chr20:35415802(-) A-I      intronic chr20:35415800(-) A-I      intronic chr20:35415779(-) A-I      intronic chr20:35415777(-) A-I      intronic chr20:35415736(-) A-I      intronic chr20:35415683(-) A-I      intronic chr20:35411104(-) A-I      3'UTR chr20:35410349(-) A-I      3'UTR chr20:35410454(-) A-I      3'UTR chr20:35410460(-) A-I      3'UTR chr20:35417830(-) A-I      intronic chr20:35417808(-) A-I      intronic chr20:35417391(-) A-I      intronic chr20:35417387(-) A-I      intronic chr20:35472592(-) A-I      intronic chr20:35472595(-) A-I      intronic chr20:35472613(-) A-I      intronic chr20:35472633(-) A-I      intronic chr20:35472934(-) A-I      intronic chr20:35472939(-) A-I      intronic chr20:35473024(-) A-I      intronic chr20:35417377(-) A-I      intronic chr20:35417356(-) A-I      intronic chr20:35417348(-) A-I      intronic chr20:35468317(-) A-I      intronic chr20:35417347(-) A-I      intronic chr20:35417321(-) A-I      intronic chr20:35417295(-) A-I      intronic chr20:35416965(-) A-I      intronic chr20:35416933(-) A-I      intronic chr20:35416906(-) A-I      intronic chr20:35416810(-) A-I      intronic chr20:35416696(-) A-I      intronic chr20:35416590(-) A-I      intronic chr20:35416476(-) A-I      intronic chr20:35416441(-) A-I      intronic chr20:35416243(-) A-I      intronic chr20:35416226(-) A-I      intronic chr20:35416170(-) A-I      intronic chr20:35415917(-) A-I      intronic chr20:35474549(-) A-I      intronic chr20:35477562(-) A-I      intronic chr20:35477571(-) A-I      intronic chr20:35477580(-) A-I      intronic chr20:35477603(-) A-I      intronic chr20:35415905(-) A-I      intronic chr20:35477684(-) A-I      intronic chr20:35478806(-) A-I      intronic chr20:35478872(-) A-I      intronic chr20:35478882(-) A-I      intronic chr20:35487411(-) A-I      intronic chr20:35487427(-) A-I      intronic chr20:35487444(-) A-I      intronic chr20:35417848(-) A-I      intronic chr20:35415813(-) A-I      intronic chr20:35415809(-) A-I      intronic chr20:35415801(-) A-I      intronic chr20:35415798(-) A-I      intronic chr20:35415727(-) A-I      intronic chr20:35415699(-) A-I      intronic chr20:35462251(-) A-I      intronic chr20:35468337(-) A-I      intronic chr20:35462219(-) A-I      intronic chr20:35453180(-) A-I      intronic chr20:35420666(-) A-I      intronic chr20:35453179(-) A-I      intronic chr20:35453144(-) A-I      intronic chr20:35453124(-) A-I      intronic chr20:35453118(-) A-I      intronic chr20:35451285(-) A-I      intronic chr20:35451266(-) A-I      intronic chr20:35450115(-) A-I      intronic chr20:35450064(-) A-I      intronic chr20:35450026(-) A-I      intronic chr20:35439404(-) A-I      intronic chr20:35439375(-) A-I      intronic chr20:35448982(-) A-I      intronic chr20:35435037(-) A-I      intronic chr20:35435033(-) A-I      intronic chr20:35435019(-) A-I      intronic chr20:35427682(-) A-I      intronic chr20:35426528(-) A-I      intronic chr20:35424133(-) A-I      intronic chr20:35424127(-) A-I      intronic chr20:35421496(-) A-I      intronic chr20:35421484(-) A-I      intronic chr20:35421397(-) A-I      intronic chr20:35420846(-) A-I      intronic chr20:35420693(-) A-I      intronic chr20:35419670(-) A-I      intronic chr20:35419641(-) A-I      intronic chr20:35419611(-) A-I      intronic chr20:35419582(-) A-I      intronic chr20:35419535(-) A-I      intronic chr20:35419530(-) A-I      intronic chr20:35419197(-) A-I      intronic chr20:35419135(-) A-I      intronic chr20:35418911(-) A-I      intronic chr20:35418467(-) A-I      intronic chr20:35471009(-) A-I      intronic chr20:35472473(-) A-I      intronic chr20:35472587(-) A-I      intronic chr20:35418054(-) A-I      intronic chr20:35418046(-) A-I      intronic chr20:35418011(-) A-I      intronic chr20:35467290(-) A-I      intronic chr20:35466903(-) A-I      intronic chr20:35417908(-) A-I      intronic chr20:35466649(-) A-I      intronic chr20:35466628(-) A-I      intronic chr20:35466622(-) A-I      intronic chr20:35464859(-) A-I      intronic chr20:35462252(-) A-I      intronic chr20:35417899(-) A-I      intronic chr20:35409734(-) A-I      3'UTR chr20:35409759(-) A-I      3'UTR chr20:35410006(-) A-I      3'UTR chr20:35410005(-) A-I      3'UTR chr20:35409882(-) A-I      3'UTR chr20:35409863(-) A-I      3'UTR chr20:35409801(-) A-I      3'UTR chr20:35410079(-) A-I      3'UTR chr20:35409782(-) A-I      3'UTR chr20:35409771(-) A-I      3'UTR chr20:35409769(-) A-I      3'UTR chr20:35411219(-) A-I      3'UTR chr20:35411045(-) A-I      3'UTR chr20:35411034(-) A-I      3'UTR chr20:35410032(-) A-I      3'UTR chr20:35410305(-) A-I      3'UTR chr20:35411042(-) A-I      3'UTR chr20:35411105(-) A-I      3'UTR chr20:35410083(-) A-I      3'UTR chr20:35411188(-) A-I      3'UTR chr20:35410027(-) A-I      3'UTR chr20:35475278(-) A-I      intronic chr20:35423336(-) A-I      intronic chr20:35421390(-) A-I      intronic chr20:35464844(-) A-I      intronic chr20:35423438(-) A-I      intronic chr20:35419148(-) A-I      intronic chr20:35468534(-) A-I      intronic chr20:35415733(-) A-I      intronic chr20:35417940(-) A-I      intronic chr20:35423358(-) A-I      intronic chr20:35453123(-) A-I      intronic chr20:35468544(-) A-I      intronic chr20:35423560(-) A-I      intronic chr20:35487322(-) A-I      intronic chr20:35421476(-) A-I      intronic chr20:35423404(-) A-I      intronic chr20:35477570(-) A-I      intronic chr20:35468479(-) A-I      intronic chr20:35436239(-) A-I      intronic chr20:35476091(-) A-I      intronic chr20:35458492(-) A-I      intronic chr20:35423372(-) A-I      intronic chr20:35477979(-) A-I      intronic chr20:35448998(-) A-I      intronic chr20:35477643(-) A-I      intronic chr20:35439910(-) A-I      intronic chr20:35417441(-) A-I      intronic chr20:35466938(-) A-I      intronic chr20:35468382(-) A-I      intronic chr20:35470415(-) A-I      intronic chr20:35473087(-) A-I      intronic chr20:35472396(-) A-I      intronic chr20:35468460(-) A-I      intronic chr20:35424022(-) A-I      intronic chr20:35417374(-) A-I      intronic chr20:35455549(-) A-I      intronic chr20:35415899(-) A-I      intronic chr20:35475289(-) A-I      intronic chr20:35417402(-) A-I      intronic chr20:35423377(-) A-I      intronic chr20:35423518(-) A-I      intronic chr20:35423515(-) A-I      intronic chr20:35423598(-) A-I      intronic chr20:35477593(-) A-I      intronic chr20:35418267(-) A-I      intronic chr20:35451321(-) A-I      intronic chr20:35451389(-) A-I      intronic chr20:35420861(-) A-I      intronic chr20:35416447(-) A-I      intronic chr20:35415739(-) A-I      intronic chr20:35475301(-) A-I      intronic chr20:35419620(-) A-I      intronic chr20:35423347(-) A-I      intronic chr20:35469660(-) A-I      intronic chr20:35423300(-) A-I      intronic chr20:35424057(-) A-I      intronic chr20:35423981(-) A-I      intronic chr20:35415728(-) A-I      intronic chr20:35473007(-) A-I      intronic chr20:35417942(-) A-I      intronic chr20:35423579(-) A-I      intronic chr20:35415645(-) A-I      intronic chr20:35477658(-) A-I      intronic chr20:35427795(-) A-I      intronic chr20:35475166(-) A-I      intronic chr20:35423371(-) A-I      intronic chr20:35439788(-) A-I      intronic chr20:35462087(-) A-I      intronic chr20:35421468(-) A-I      intronic chr20:35416557(-) A-I      intronic chr20:35429572(-) A-I      intronic chr20:35420869(-) A-I      intronic chr20:35417215(-) A-I      intronic chr20:35423232(-) A-I      intronic chr20:35450058(-) A-I      intronic chr20:35423287(-) A-I      intronic chr20:35468394(-) A-I      intronic chr20:35415660(-) A-I      intronic chr20:35430650(-) A-I      intronic chr20:35471112(-) A-I      intronic chr20:35478808(-) A-I      intronic chr20:35468827(-) A-I      intronic chr20:35478867(-) A-I      intronic chr20:35423316(-) A-I      intronic chr20:35423414(-) A-I      intronic chr20:35416541(-) A-I      intronic chr20:35423513(-) A-I      intronic chr20:35470958(-) A-I      intronic chr20:35418949(-) A-I      intronic chr20:35423374(-) A-I      intronic chr20:35423269(-) A-I      intronic chr20:35423506(-) A-I      intronic chr20:35471169(-) A-I      intronic chr20:35423369(-) A-I      intronic chr20:35468844(-) A-I      intronic chr20:35429560(-) A-I      intronic chr20:35478675(-) A-I      intronic chr20:35469084(-) A-I      intronic chr20:35469009(-) A-I      intronic chr20:35423286(-) A-I      intronic chr20:35427737(-) A-I      intronic chr20:35427728(-) A-I      intronic chr20:35416123(-) A-I      intronic chr20:35477629(-) A-I      intronic chr20:35424096(-) A-I      intronic chr20:35418998(-) A-I      intronic chr20:35467338(-) A-I      intronic chr20:35468404(-) A-I      intronic chr20:35466077(-) A-I      intronic chr20:35475350(-) A-I      intronic chr20:35452149(-) A-I      intronic chr20:35439844(-) A-I      intronic chr20:35419665(-) A-I      intronic chr20:35470167(-) A-I      intronic chr20:35426503(-) A-I      intronic chr20:35477640(-) A-I      intronic chr20:35416034(-) A-I      intronic chr20:35469082(-) A-I      intronic chr20:35452167(-) A-I      intronic chr20:35417820(-) A-I      intronic chr20:35458099(-) A-I      intronic chr20:35477633(-) A-I      intronic chr20:35423555(-) A-I      intronic chr20:35477554(-) A-I      intronic chr20:35423285(-) A-I      intronic chr20:35423512(-) A-I      intronic chr20:35468531(-) A-I      intronic chr20:35420660(-) A-I      intronic chr20:35468996(-) A-I      intronic chr20:35477641(-) A-I      intronic chr20:35470918(-) A-I      intronic chr20:35471167(-) A-I      intronic chr20:35423379(-) A-I      intronic chr20:35477665(-) A-I      intronic chr20:35470210(-) A-I      intronic chr20:35477916(-) A-I      intronic chr20:35419104(-) A-I      intronic chr20:35452180(-) A-I      intronic chr20:35423706(-) A-I      intronic chr20:35419562(-) A-I      intronic chr20:35415768(-) A-I      intronic chr20:35410420(-) A-I      3'UTR chr20:35410411(-) A-I      3'UTR chr20:35410444(-) A-I      3'UTR chr20:35409827(-) A-I      3'UTR chr20:35410343(-) A-I      3'UTR chr20:35410408(-) A-I      3'UTR chr20:35410352(-) A-I      3'UTR chr20:35409713(-) A-I      3'UTR chr20:35409992(-) A-I      3'UTR chr20:35410356(-) A-I      3'UTR chr20:35409913(-) A-I      3'UTR chr20:35409887(-) A-I      3'UTR chr20:35409695(-) A-I      3'UTR chr20:35410515(-) A-I      3'UTR chr20:35410378(-) A-I      3'UTR chr20:35409694(-) A-I      3'UTR chr20:35410014(-) A-I      3'UTR chr20:35410486(-) A-I      3'UTR chr20:35410445(-) A-I      3'UTR chr20:35410468(-) A-I      3'UTR chr20:35409839(-) A-I      3'UTR chr20:35409804(-) A-I      3'UTR chr20:35410473(-) A-I      3'UTR chr20:35411065(-) A-I      3'UTR chr20:35409856(-) A-I      3'UTR chr20:35409903(-) A-I      3'UTR chr20:35409901(-) A-I      3'UTR chr20:35411183(-) A-I      3'UTR chr20:35409870(-) A-I      3'UTR chr20:35411151(-) A-I      3'UTR chr20:35409982(-) A-I      3'UTR chr20:35410508(-) A-I      3'UTR chr20:35410314(-) A-I      3'UTR chr20:35410409(-) A-I      3'UTR chr20:35410337(-) A-I      3'UTR chr20:35409917(-) A-I      3'UTR chr20:35410369(-) A-I      3'UTR chr20:35410405(-) A-I      3'UTR chr20:35409776(-) A-I      3'UTR chr20:35411029(-) A-I      3'UTR chr20:35410323(-) A-I      3'UTR chr20:35410373(-) A-I      3'UTR chr20:35411106(-) A-I      3'UTR chr20:35410417(-) A-I      3'UTR chr20:35411075(-) A-I      3'UTR chr20:35410434(-) A-I      3'UTR chr20:35409838(-) A-I      3'UTR chr20:35410085(-) A-I      3'UTR chr20:35410492(-) A-I      3'UTR chr20:35409826(-) A-I      3'UTR chr20:35411013(-) A-I      3'UTR chr20:35411115(-) A-I      3'UTR chr20:35410436(-) A-I      3'UTR chr20:35410463(-) A-I      3'UTR chr20:35410379(-) A-I      3'UTR chr20:35410509(-) A-I      3'UTR chr20:35409892(-) A-I      3'UTR chr20:35410418(-) A-I      3'UTR chr20:35411133(-) A-I      3'UTR chr20:35411093(-) A-I      3'UTR chr20:35410004(-) A-I      3'UTR chr20:35409877(-) A-I      3'UTR chr20:35409853(-) A-I      3'UTR chr20:35411052(-) A-I      3'UTR chr20:35411205(-) A-I      3'UTR chr20:35410503(-) A-I      3'UTR chr20:35411114(-) A-I      3'UTR chr20:35410500(-) A-I      3'UTR chr20:35410362(-) A-I      3'UTR chr20:35409709(-) A-I      3'UTR chr20:35409931(-) A-I      3'UTR chr20:35409691(-) A-I      3'UTR chr20:35410419(-) A-I      3'UTR chr20:35410416(-) A-I      3'UTR chr20:35418373(-) A-I      intronic chr20:35451399(-) A-I      intronic chr20:35453484(-) A-I      intronic chr20:35415646(-) A-I      intronic chr20:35453483(-) A-I      intronic chr20:35461032(-) A-I      intronic chr20:35417275(-) A-I      intronic chr20:35420745(-) A-I      intronic chr20:35416669(-) A-I      intronic chr20:35423274(-) A-I      intronic chr20:35478714(-) A-I      intronic chr20:35477644(-) A-I      intronic chr20:35449041(-) A-I      intronic chr20:35415808(-) A-I      intronic chr20:35415853(-) A-I      intronic chr20:35458669(-) A-I      intronic chr20:35436371(-) A-I      intronic chr20:35469718(-) A-I      intronic chr20:35417926(-) A-I      intronic chr20:35416177(-) A-I      intronic chr20:35417847(-) A-I      intronic chr20:35435102(-) A-I      intronic chr20:35452089(-) A-I      intronic chr20:35464662(-) A-I      intronic chr20:35468430(-) A-I      intronic chr20:35458098(-) A-I      intronic chr20:35470931(-) A-I      intronic chr20:35421535(-) A-I      intronic chr20:35468397(-) A-I      intronic chr20:35478846(-) A-I      intronic chr20:35472427(-) A-I      intronic chr20:35477966(-) A-I      intronic chr20:35416492(-) A-I      intronic chr20:35439869(-) A-I      intronic chr20:35475999(-) A-I      intronic chr20:35424116(-) A-I      intronic chr20:35416126(-) A-I      intronic chr20:35478011(-) A-I      intronic chr20:35477735(-) A-I      intronic chr20:35478688(-) A-I      intronic chr20:35423264(-) A-I      intronic chr20:35417936(-) A-I      intronic chr20:35423961(-) A-I      intronic chr20:35473362(-) A-I      intronic chr20:35452007(-) A-I      intronic chr20:35415480(-) A-I      intronic chr20:35427603(-) A-I      intronic chr20:35457997(-) A-I      intronic chr20:35421483(-) A-I      intronic chr20:35452103(-) A-I      intronic chr20:35419198(-) A-I      intronic chr20:35472517(-) A-I      intronic chr20:35423479(-) A-I      intronic chr20:35426569(-) A-I      intronic chr20:35415649(-) A-I      intronic chr20:35418005(-) A-I      intronic chr20:35419534(-) A-I      intronic chr20:35421540(-) A-I      intronic chr20:35416701(-) A-I      intronic chr20:35462089(-) A-I      intronic chr20:35487426(-) A-I      intronic chr20:35478866(-) A-I      intronic chr20:35417882(-) A-I      intronic chr20:35468361(-) A-I      intronic chr20:35466592(-) A-I      intronic chr20:35469614(-) A-I      intronic chr20:35451451(-) A-I      intronic chr20:35427811(-) A-I      intronic chr20:35436245(-) A-I      intronic chr20:35470340(-) A-I      intronic chr20:35468410(-) A-I      intronic chr20:35436178(-) A-I      intronic chr20:35416242(-) A-I      intronic chr20:35436232(-) A-I      intronic chr20:35424049(-) A-I      intronic chr20:35436191(-) A-I      intronic chr20:35417416(-) A-I      intronic chr20:35477586(-) A-I      intronic chr20:35426647(-) A-I      intronic chr20:35421521(-) A-I      intronic chr20:35469487(-) A-I      intronic chr20:35473205(-) A-I      intronic chr20:35439920(-) A-I      intronic chr20:35465089(-) A-I      intronic chr20:35416438(-) A-I      intronic chr20:35418034(-) A-I      intronic chr20:35473331(-) A-I      intronic chr20:35423510(-) A-I      intronic chr20:35421440(-) A-I      intronic chr20:35415898(-) A-I      intronic chr20:35451319(-) A-I      intronic chr20:35416496(-) A-I      intronic chr20:35424006(-) A-I      intronic chr20:35469060(-) A-I      intronic chr20:35474526(-) A-I      intronic chr20:35417893(-) A-I      intronic chr20:35423480(-) A-I      intronic chr20:35420694(-) A-I      intronic chr20:35417902(-) A-I      intronic chr20:35451299(-) A-I      intronic chr20:35477921(-) A-I      intronic chr20:35470199(-) A-I      intronic chr20:35420654(-) A-I      intronic chr20:35469080(-) A-I      intronic chr20:35423310(-) A-I      intronic chr20:35415691(-) A-I      intronic chr20:35469018(-) A-I      intronic chr20:35477726(-) A-I      intronic chr20:35469008(-) A-I      intronic chr20:35416359(-) A-I      intronic chr20:35439260(-) A-I      intronic chr20:35426558(-) A-I      intronic chr20:35424171(-) A-I      intronic chr20:35426601(-) A-I      intronic chr20:35468403(-) A-I      intronic chr20:35475244(-) A-I      intronic chr20:35466117(-) A-I      intronic chr20:35418667(-) A-I      intronic chr20:35470380(-) A-I      intronic chr20:35451172(-) A-I      intronic chr20:35477976(-) A-I      intronic chr20:35417952(-) A-I      intronic chr20:35427556(-) A-I      intronic chr20:35469624(-) A-I      intronic chr20:35415806(-) A-I      intronic chr20:35426653(-) A-I      intronic chr20:35477935(-) A-I      intronic chr20:35426549(-) A-I      intronic chr20:35416495(-) A-I      intronic chr20:35478860(-) A-I      intronic chr20:35436707(-) A-I      intronic chr20:35417992(-) A-I      intronic chr20:35449042(-) A-I      intronic chr20:35421452(-) A-I      intronic chr20:35468319(-) A-I      intronic chr20:35473009(-) A-I      intronic chr20:35421481(-) A-I      intronic chr20:35452142(-) A-I      intronic chr20:35419631(-) A-I      intronic chr20:35420784(-) A-I      intronic chr20:35416522(-) A-I      intronic chr20:35478842(-) A-I      intronic chr20:35435105(-) A-I      intronic chr20:35477929(-) A-I      intronic chr20:35477668(-) A-I      intronic chr20:35419708(-) A-I      intronic chr20:35478772(-) A-I      intronic chr20:35450114(-) A-I      intronic chr20:35436346(-) A-I      intronic chr20:35426656(-) A-I      intronic chr20:35421478(-) A-I      intronic chr20:35419602(-) A-I      intronic chr20:35424140(-) A-I      intronic chr20:35471118(-) A-I      intronic chr20:35423450(-) A-I      intronic chr20:35419592(-) A-I      intronic chr20:35417306(-) A-I      intronic chr20:35415661(-) A-I      intronic chr20:35449999(-) A-I      intronic chr20:35423720(-) A-I      intronic chr20:35469065(-) A-I      intronic chr20:35455934(-) A-I      intronic chr20:35451325(-) A-I      intronic chr20:35478893(-) A-I      intronic chr20:35426730(-) A-I      intronic chr20:35426533(-) A-I      intronic chr20:35416653(-) A-I      intronic chr20:35463342(-) A-I      intronic chr20:35477625(-) A-I      intronic chr20:35436172(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SOGA1	chr20:35409773(-) A-I intron -    22327324 chr20:35409776(-) A-I intron -    22327324 chr20:35415691(-) A-I intron -    22327324 chr20:35417992(-) A-I intron -    22327324 chr20:35423285(-) A-I intron -    22028664 chr20:35423286(-) A-I intron -    22028664 chr20:35423287(-) A-I intron -    22028664 chr20:35423300(-) A-I intron -    22028664 chr20:35423310(-) A-I intron -    22028664 chr20:35423316(-) A-I intron -    22028664 chr20:35423332(-) A-I intron -    22028664 chr20:35423336(-) A-I intron -    22028664 chr20:35423347(-) A-I intron -    22028664 chr20:35423358(-) A-I intron -    22028664 chr20:35423369(-) A-I intron -    22028664 chr20:35423371(-) A-I intron -    22028664 chr20:35423372(-) A-I intron -    22028664 chr20:35423374(-) A-I intron -    22028664 chr20:35423377(-) A-I intron -    22028664 chr20:35423379(-) A-I intron -    22028664 chr20:35423404(-) A-I intron -    22028664 chr20:35423414(-) A-I intron -    22028664 chr20:35423424(-) A-I intron -    22028664 chr20:35423438(-) A-I intron -    22028664 chr20:35423439(-) A-I intron -    22028664 chr20:35423479(-) A-I intron -    22028664 chr20:35423480(-) A-I intron -    22028664 chr20:35423506(-) A-I intron -    22028664 chr20:35423512(-) A-I intron -    22028664 chr20:35423513(-) A-I intron -    22028664 chr20:35423515(-) A-I intron -    22028664 chr20:35423518(-) A-I intron -    22028664 chr20:35423555(-) A-I intron -    22028664 chr20:35423560(-) A-I intron -    22028664 chr20:35423579(-) A-I intron -    22028664 chr20:35423598(-) A-I intron -    22028664 chr20:35409817(-) A-I intron -    21960545 chr20:35409826(-) A-I intron -    21960545 chr20:35409853(-) A-I intron -    21960545 chr20:35409856(-) A-I intron -    21960545 chr20:35410314(-) A-I intron -    21960545 chr20:35410515(-) A-I intron -    21960545 chr20:35409773(-) A-G intron -    22484847 chr20:35409776(-) A-G intron -    22484847 chr20:35409817(-) A-G intron -    22484847 chr20:35409827(-) A-G intron -    22484847 chr20:35409838(-) A-G intron -    22484847 chr20:35409856(-) A-G intron -    22484847 chr20:35410314(-) A-G intron -    22484847 chr20:35410378(-) A-G intron -    22484847 chr20:35410379(-) A-G intron -    22484847 chr20:35410500(-) A-G intron -    22484847 chr20:35410515(-) A-G intron -    22484847 chr20:35415660(-) A-G intron -    22484847 chr20:35415661(-) A-G intron -    22484847 chr20:35415691(-) A-G intron -    22484847 chr20:35415698(-) A-G intron -    22484847 chr20:35415733(-) A-G intron -    22484847 chr20:35415810(-) A-G intron -    22484847 chr20:35415827(-) A-G intron -    22484847 chr20:35417893(-) A-G intron -    22484847 chr20:35417992(-) A-G intron -    22484847 chr20:35420861(-) A-G intron -    22484847 chr20:35421535(-) A-G intron -    22484847 chr20:35451325(-) A-G intron -    22484847 chr20:35453483(-) A-G intron -    22484847 chr20:35468319(-) A-G intron -    22484847 chr20:35468394(-) A-G intron -    22484847 chr20:35468397(-) A-G intron -    22484847 chr20:35468479(-) A-G intron -    22484847 chr20:35469661(-) T-C intron -    22484847 chr20:35477550(-) A-G intron -    22484847 chr20:35477734(-) A-G intron -    22484847 chr20:35477921(-) A-G intron -    22484847 chr20:35477929(-) A-G intron -    22484847 chr20:35477976(-) A-G intron -    22484847 chr20:35478808(-) A-G intron -    22484847 chr20:35478860(-) A-G intron -    22484847 chr20:35478866(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SOGA1	chr20:35406083-35406084(-) m6A 3'UTR       24284625 chr20:35406115-35406116(-) m6A 3'UTR       24284625 chr20:35406175-35406176(-) m6A 3'UTR       24284625//24981863 chr20:35406265-35406266(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr20:35406278-35406279(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr20:35406360-35406361(-) m6A 3'UTR//intron       24981863//27773535 chr20:35406392-35406393(-) m6A 3'UTR//intron       24981863//27773535 chr20:35407549-35407550(-) m6A 3'UTR//intron       24284625//27773535 chr20:35407556-35407557(-) m6A 3'UTR//intron       24284625//27773535 chr20:35407573-35407574(-) m6A 3'UTR//intron       24284625//27773535 chr20:35407681-35407682(-) m6A 3'UTR//intron       24284625//27773535 chr20:35408451-35408452(-) m6A 3'UTR//intron       27773535 chr20:35408729-35408730(-) m6A 3'UTR//intron       27773535 chr20:35408745-35408746(-) m6A 3'UTR//intron       27773535 chr20:35408751-35408752(-) m6A 3'UTR//intron       27773535 chr20:35408769-35408770(-) m6A 3'UTR//intron       27773535 chr20:35411346-35411347(-) m6A 3'UTR//intron       24981863//27773535 chr20:35411510-35411511(-) m6A 3'UTR//intron       27773535 chr20:35412045-35412046(-) m6A 3'UTR//intron       24284625 chr20:35412406-35412407(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr20:35412469-35412470(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:35412477-35412478(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:35412491-35412492(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:35412755-35412756(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412798-35412799(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412822-35412823(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412870-35412871(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412906-35412907(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412951-35412952(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412964-35412965(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35412992-35412993(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35413032-35413033(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr20:35413259-35413260(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr20:35413296-35413297(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr20:35413301-35413302(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr20:35413306-35413307(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr20:35413318-35413319(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr20:35413543-35413544(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960 chr20:35413627-35413628(-) m6A 3'UTR//intron       24284625//24209618//24981863//22575960 chr20:35413706-35413707(-) m6A 3'UTR//intron       24284625//24981863 chr20:35413727-35413728(-) m6A 3'UTR//intron       - chr20:35413849-35413850(-) m6A 3'UTR//intron       24981863 chr20:35413863-35413864(-) m6A 3'UTR//intron       24981863 chr20:35413875-35413876(-) m6A 3'UTR//intron       24981863 chr20:35413898-35413899(-) m6A 3'UTR//intron       24981863 chr20:35414084-35414085(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:35414111-35414112(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:35414122-35414123(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr20:35414202-35414203(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr20:35414313-35414314(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22575960 chr20:35414433-35414434(-) m6A 3'UTR//intron       24284625//25456834//24981863//22575960 chr20:35414448-35414449(-) m6A 3'UTR//intron       24284625//25456834//24981863//22575960 chr20:35414644-35414645(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960 chr20:35414649-35414650(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960 chr20:35414766-35414767(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085 chr20:35414831-35414832(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35421726-35421727(-) m6A CDS//intron       24284625 chr20:35421766-35421767(-) m6A CDS//intron       24284625 chr20:35421954-35421955(-) m6A CDS//intron       24284625//25456834//24981863//26404942//22575960//22608085 chr20:35422011-35422012(-) m6A CDS//intron       24284625//25456834//24981863//26404942//27371828//22575960//22608085 chr20:35422024-35422025(-) m6A CDS//intron       24284625//25456834//24981863//26404942//27371828//22575960//22608085 chr20:35422042-35422043(-) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr20:35422099-35422100(-) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr20:35422114-35422115(-) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr20:35422126-35422127(-) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr20:35422213-35422214(-) m6A CDS//intron       24284625//24981863//27371828//22575960 chr20:35422310-35422311(-) m6A CDS//intron       24284625//27371828//22575960 chr20:35422340-35422341(-) m6A CDS//intron       24284625//27371828//22575960 chr20:35422789-35422790(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35422822-35422823(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35422855-35422856(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr20:35425916-35425917(-) Cm CDS       - chr20:35425920-35425921(-) m6A CDS       24284625 chr20:35431271-35431272(-) m6A CDS       24284625//22575960 chr20:35431497-35431498(-) m6A CDS       24284625//24209618//24981863 chr20:35433172-35433173(-) m6A CDS       24284625//24209618//27371828 chr20:35433286-35433287(-) m6A CDS       24284625//24209618//27773535//22575960 chr20:35434259-35434260(-) m6A CDS       24284625//24209618//27773535//22575960 chr20:35434266-35434267(-) m6A CDS       24284625//24209618//27773535//22575960 chr20:35434274-35434275(-) m6A CDS       24284625//24209618//27773535//22575960 chr20:35434355-35434356(-) m6A CDS       24284625 chr20:35441230-35441231(-) m6A CDS       24284625 chr20:35443535-35443536(-) m6A CDS       24284625 chr20:35443547-35443548(-) m6A CDS       24284625 chr20:35443621-35443622(-) m6A CDS       24284625//25456834//27371828//27773536//22575960//22608085 chr20:35443727-35443728(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35443787-35443788(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35443938-35443939(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35443973-35443974(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444063-35444064(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444143-35444144(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444165-35444166(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444234-35444235(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444240-35444241(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444432-35444433(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr20:35444514-35444515(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr20:35444564-35444565(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr20:35444570-35444571(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr20:35444696-35444697(-) m6A CDS       24284625//24981863//27773535 chr20:35444705-35444706(-) m6A CDS       24284625//24981863//27773535 chr20:35445820-35445821(-) m6A CDS       24284625//24981863//27773535 chr20:35445850-35445851(-) m6A CDS       24284625//24981863//27773535//22575960 chr20:35457011-35457012(-) m6A exon//intron       24284625//27773535 chr20:35457048-35457049(-) m6A exon//intron       24284625 chr20:35457141-35457142(-) m6A exon//intron       25456834 chr20:35457174-35457175(-) m6A exon//intron       25456834 chr20:35457449-35457450(-) m6A exon//intron       24284625//25456834 chr20:35457506-35457507(-) m6A CDS//exon       24284625//25456834 chr20:35457539-35457540(-) Gm CDS//exon       - chr20:35457604-35457605(-) m6A CDS//exon       24284625 chr20:35467669-35467670(-) m6A CDS//exon       24284625 chr20:35467732-35467733(-) m6A CDS//exon       24284625 chr20:35467746-35467747(-) m6A CDS//exon       24284625 chr20:35475672-35475673(-) Cm intron       - chr20:35491124-35491125(-) m6A CDS       24284625//27773536 chr20:35491373-35491374(-) m6A CDS       24209618//27773536//22575960 chr20:35491535-35491536(-) m6A CDS       27773536 chr20:35491911-35491912(-) m6A 5'UTR       24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-3179	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Fibroblasts|Mesenchymal stem cells     -
	SOGA1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-3179
Interactor2: SOGA1

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.