Basic Information:

  VIRBase ID:  

HHID00072534

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-3174:  MIMAT0015051          AASDHPPT:  NM_015423     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-3174	AASDHPPT
miRBase Accession/Entrez ID	MIMAT0015051	60496
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	AASD-PPT//ACPS//CGI-80//LYS2//LYS5

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-3174	rs1159846130 chr15:90006777    A/G rs1295514792 chr15:90006764    T/TGTTAGAGATGC rs775051847 chr15:90006779    G/C

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AASDHPPT	chr11:105948368-105948369(+) m1A 5'UTR//intron       26863196 chr11:105962127-105962128(+) m6A 3'UTR//CDS       24981863 chr11:105962156-105962157(+) m6A 3'UTR//CDS       24981863 chr11:105962230-105962231(+) m6A exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-3174	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
	AASDHPPT	Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-3174
Interactor2: AASDHPPT

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.