Detail Information

Basic Information:


  VIRBase ID:  

HHID00072521

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-3174:           NUSAP1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-3174 NUSAP1
miRBase
Accession/Entrez ID
MIMAT0015051 51203
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ANKT//BM037//LNP//NUSAP//PRO0310p1//Q0310//SAPL

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-3174
rs1159846130 chr15:90006777    A/G
rs1295514792 chr15:90006764    T/TGTTAGAGATGC
rs775051847 chr15:90006779    G/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NUSAP1
chr15:41625999(+) A-I      intronic
chr15:41660426(+) A-I      intronic
chr15:41657520(+) A-I      intronic
chr15:41626567(+) A-I      intronic
chr15:41625864(+) A-I      intronic
chr15:41655354(+) A-I      intronic
chr15:41626576(+) A-I      intronic
chr15:41657484(+) A-I      intronic
chr15:41652601(+) A-I      intronic
chr15:41648138(+) A-I      intronic
chr15:41648119(+) A-I      intronic
chr15:41647631(+) A-I      intronic
chr15:41647532(+) A-I      intronic
chr15:41637400(+) A-I      intronic
chr15:41645408(+) A-I      intronic
chr15:41645467(+) A-I      intronic
chr15:41635670(+) A-I      intronic
chr15:41637124(+) A-I      intronic
chr15:41660428(+) A-I      intronic
chr15:41661031(+) A-I      intronic
chr15:41661169(+) A-I      intronic
chr15:41661185(+) A-I      intronic
chr15:41657454(+) A-I      intronic
chr15:41661771(+) A-I      intronic
chr15:41635652(+) A-I      intronic
chr15:41661796(+) A-I      intronic
chr15:41665217(+) A-I      intronic
chr15:41626981(+) A-I      intronic
chr15:41661644(+) A-I      intronic
chr15:41626575(+) A-I      intronic
chr15:41635653(+) A-I      intronic
chr15:41655738(+) A-I      intronic
chr15:41644938(+) A-I      intronic
chr15:41670133(+) A-I      intronic
chr15:41626943(+) A-I      intronic
chr15:41647173(+) A-I      intronic
chr15:41665124(+) A-I      intronic
chr15:41644222(+) A-I      intronic
chr15:41658170(+) A-I      intronic
chr15:41645529(+) A-I      intronic
chr15:41638869(+) A-I      intronic
chr15:41658621(+) A-I      intronic
chr15:41638866(+) A-I      intronic
chr15:41638280(+) A-I      intronic
chr15:41638278(+) A-I      intronic
chr15:41637459(+) A-I      intronic
chr15:41646455(+) A-I      intronic
chr15:41665126(+) A-I      intronic
chr15:41637418(+) A-I      intronic
chr15:41643878(+) A-I      intronic
chr15:41636581(+) A-I      intronic
chr15:41637033(+) A-I      intronic
chr15:41649759(+) A-I      intronic
chr15:41658019(+) A-I      intronic
chr15:41645466(+) A-I      intronic
chr15:41637298(+) A-I      intronic
chr15:41637231(+) A-I      intronic
chr15:41637054(+) A-I      intronic
chr15:41636978(+) A-I      intronic
chr15:41636924(+) A-I      intronic
chr15:41636761(+) A-I      intronic
chr15:41635909(+) A-I      intronic
chr15:41635741(+) A-I      intronic
chr15:41635692(+) A-I      intronic
chr15:41635682(+) A-I      intronic
chr15:41635657(+) A-I      intronic
chr15:41628337(+) A-I      intronic
chr15:41635656(+) A-I      intronic
chr15:41632199(+) A-I      intronic
chr15:41632114(+) A-I      intronic
chr15:41631797(+) A-I      intronic
chr15:41631020(+) A-I      intronic
chr15:41665128(+) A-I      intronic
chr15:41630413(+) A-I      intronic
chr15:41630394(+) A-I      intronic
chr15:41630368(+) A-I      intronic
chr15:41630354(+) A-I      intronic
chr15:41628874(+) A-I      intronic
chr15:41628873(+) A-I      intronic
chr15:41644900(+) A-I      intronic
chr15:41660416(+) A-I      intronic
chr15:41626955(+) A-I      intronic
chr15:41626060(+) A-I      intronic
chr15:41625975(+) A-I      intronic
chr15:41644267(+) A-I      intronic
chr15:41625936(+) A-I      intronic
chr15:41651893(+) A-I      intronic
chr15:41638904(+) A-I      intronic
chr15:41625909(+) A-I      intronic
chr15:41639828(+) A-I      intronic
chr15:41643774(+) A-I      intronic
chr15:41625890(+) A-I      intronic
chr15:41637787(+) A-I      intronic
chr15:41652437(+) A-I      intronic
chr15:41665790(+) A-I      intronic
chr15:41652618(+) A-I      intronic
chr15:41637223(+) A-I      intronic
chr15:41644935(+) A-I      intronic
chr15:41643726(+) A-I      intronic
chr15:41629348(+) A-I      intronic
chr15:41655771(+) A-I      intronic
chr15:41646449(+) A-I      intronic
chr15:41662004(+) A-I      intronic
chr15:41637433(+) A-I      intronic
chr15:41665043(+) A-I      intronic
chr15:41645549(+) A-I      intronic
chr15:41630892(+) A-I      intronic
chr15:41661726(+) A-I      intronic
chr15:41644164(+) A-I      intronic
chr15:41647300(+) A-I      intronic
chr15:41665125(+) A-I      intronic
chr15:41647163(+) A-I      intronic
chr15:41636294(+) A-I      intronic
chr15:41647095(+) A-I      intronic
chr15:41647071(+) A-I      intronic
chr15:41647062(+) A-I      intronic
chr15:41646988(+) A-I      intronic
chr15:41646962(+) A-I      intronic
chr15:41660468(+) A-I      intronic
chr15:41646961(+) A-I      intronic
chr15:41646685(+) A-I      intronic
chr15:41646653(+) A-I      intronic
chr15:41670956(+) A-I      intronic
chr15:41646552(+) A-I      intronic
chr15:41646550(+) A-I      intronic
chr15:41670888(+) A-I      intronic
chr15:41646549(+) A-I      intronic
chr15:41647571(+) A-I      intronic
chr15:41645428(+) A-I      intronic
chr15:41636725(+) A-I      intronic
chr15:41670938(+) A-I      intronic
chr15:41655806(+) A-I      intronic
chr15:41646547(+) A-I      intronic
chr15:41646543(+) A-I      intronic
chr15:41637432(+) A-I      intronic
chr15:41646541(+) A-I      intronic
chr15:41658012(+) A-I      intronic
chr15:41646525(+) A-I      intronic
chr15:41664025(+) A-I      intronic
chr15:41645537(+) A-I      intronic
chr15:41644392(+) A-I      intronic
chr15:41644259(+) A-I      intronic
chr15:41625938(+) A-I      intronic
chr15:41646538(+) A-I      intronic
chr15:41644221(+) A-I      intronic
chr15:41647471(+) A-I      intronic
chr15:41643910(+) A-I      intronic
chr15:41637297(+) A-I      intronic
chr15:41665163(+) A-I      intronic
chr15:41647475(+) A-I      intronic
chr15:41643832(+) A-I      intronic
chr15:41643798(+) A-I      intronic
chr15:41645374(+) A-I      intronic
chr15:41670877(+) A-I      intronic
chr15:41670821(+) A-I      intronic
chr15:41668144(+) A-I      intronic
chr15:41668121(+) A-I      intronic
chr15:41667636(+) A-I      intronic
chr15:41667635(+) A-I      intronic
chr15:41667634(+) A-I      intronic
chr15:41667420(+) A-I      intronic
chr15:41667059(+) A-I      intronic
chr15:41666925(+) A-I      intronic
chr15:41666908(+) A-I      intronic
chr15:41665837(+) A-I      intronic
chr15:41665822(+) A-I      intronic
chr15:41665684(+) A-I      intronic
chr15:41665679(+) A-I      intronic
chr15:41665506(+) A-I      intronic
chr15:41665416(+) A-I      intronic
chr15:41665414(+) A-I      intronic
chr15:41665214(+) A-I      intronic
chr15:41637395(+) A-I      intronic
chr15:41665136(+) A-I      intronic
chr15:41665085(+) A-I      intronic
chr15:41665078(+) A-I      intronic
chr15:41665014(+) A-I      intronic
chr15:41664242(+) A-I      intronic
chr15:41664240(+) A-I      intronic
chr15:41664073(+) A-I      intronic
chr15:41664069(+) A-I      intronic
chr15:41670078(+) A-I      intronic
chr15:41661774(+) A-I      intronic
chr15:41661758(+) A-I      intronic
chr15:41639967(+) A-I      intronic
chr15:41661735(+) A-I      intronic
chr15:41661691(+) A-I      intronic
chr15:41661689(+) A-I      intronic
chr15:41661645(+) A-I      intronic
chr15:41630231(+) A-I      intronic
chr15:41661626(+) A-I      intronic
chr15:41661343(+) A-I      intronic
chr15:41662146(+) A-I      intronic
chr15:41656856(+) A-I      intronic
chr15:41656758(+) A-I      intronic
chr15:41656730(+) A-I      intronic
chr15:41656719(+) A-I      intronic
chr15:41656676(+) A-I      intronic
chr15:41656594(+) A-I      intronic
chr15:41656592(+) A-I      intronic
chr15:41656588(+) A-I      intronic
chr15:41656560(+) A-I      intronic
chr15:41656292(+) A-I      intronic
chr15:41655836(+) A-I      intronic
chr15:41655805(+) A-I      intronic
chr15:41655711(+) A-I      intronic
chr15:41655647(+) A-I      intronic
chr15:41653503(+) A-I      intronic
chr15:41653497(+) A-I      intronic
chr15:41653452(+) A-I      intronic
chr15:41653432(+) A-I      intronic
chr15:41653430(+) A-I      intronic
chr15:41639857(+) A-I      intronic
chr15:41646450(+) A-I      intronic
chr15:41653302(+) A-I      intronic
chr15:41662857(+) A-I      intronic
chr15:41653301(+) A-I      intronic
chr15:41653217(+) A-I      intronic
chr15:41653204(+) A-I      intronic
chr15:41653203(+) A-I      intronic
chr15:41652644(+) A-I      intronic
chr15:41652615(+) A-I      intronic
chr15:41652608(+) A-I      intronic
chr15:41652560(+) A-I      intronic
chr15:41652463(+) A-I      intronic
chr15:41652356(+) A-I      intronic
chr15:41652347(+) A-I      intronic
chr15:41652196(+) A-I      intronic
chr15:41651403(+) A-I      intronic
chr15:41650813(+) A-I      intronic
chr15:41650758(+) A-I      intronic
chr15:41650749(+) A-I      intronic
chr15:41649825(+) A-I      intronic
chr15:41649816(+) A-I      intronic
chr15:41649742(+) A-I      intronic
chr15:41649710(+) A-I      intronic
chr15:41649352(+) A-I      intronic
chr15:41647992(+) A-I      intronic
chr15:41647488(+) A-I      intronic
chr15:41665433(+) A-I      intronic
chr15:41673068(+) A-I      3'UTR
chr15:41630953(+) A-I      intronic
chr15:41655833(+) A-I      intronic
chr15:41643940(+) A-I      intronic
chr15:41655761(+) A-I      intronic
chr15:41671524(+) A-I      intronic
chr15:41639825(+) A-I      intronic
chr15:41626039(+) A-I      intronic
chr15:41661753(+) A-I      intronic
chr15:41656650(+) A-I      intronic
chr15:41625943(+) A-I      intronic
chr15:41635578(+) A-I      intronic
chr15:41632119(+) A-I      intronic
chr15:41645602(+) A-I      intronic
chr15:41647568(+) A-I      intronic
chr15:41666149(+) A-I      intronic
chr15:41665436(+) A-I      intronic
chr15:41648004(+) A-I      intronic
chr15:41637094(+) A-I      intronic
chr15:41630913(+) A-I      intronic
chr15:41670808(+) A-I      intronic
chr15:41645568(+) A-I      intronic
chr15:41656623(+) A-I      intronic
chr15:41652592(+) A-I      intronic
chr15:41645410(+) A-I      intronic
chr15:41636689(+) A-I      intronic
chr15:41671872(+) A-I      intronic
chr15:41665127(+) A-I      intronic
chr15:41646551(+) A-I      intronic
chr15:41626059(+) A-I      intronic
chr15:41665427(+) A-I      intronic
chr15:41628338(+) A-I      intronic
chr15:41665179(+) A-I      intronic
chr15:41630272(+) A-I      intronic
chr15:41635826(+) A-I      intronic
chr15:41657455(+) A-I      intronic
chr15:41636988(+) A-I      intronic
chr15:41645478(+) A-I      intronic
chr15:41656946(+) A-I      intronic
chr15:41637114(+) A-I      intronic
chr15:41643782(+) A-I      intronic
chr15:41653330(+) A-I      intronic
chr15:41630270(+) A-I      intronic
chr15:41646582(+) A-I      intronic
chr15:41635735(+) A-I      intronic
chr15:41658058(+) A-I      intronic
chr15:41637436(+) A-I      intronic
chr15:41652476(+) A-I      intronic
chr15:41626417(+) A-I      intronic
chr15:41630353(+) A-I      intronic
chr15:41664243(+) A-I      intronic
chr15:41667453(+) A-I      intronic
chr15:41670870(+) A-I      intronic
chr15:41671291(+) A-I      intronic
chr15:41630395(+) A-I      intronic
chr15:41643926(+) A-I      intronic
chr15:41661725(+) A-I      intronic
chr15:41670920(+) A-I      intronic
chr15:41662222(+) A-I      intronic
chr15:41643858(+) A-I      intronic
chr15:41635732(+) A-I      intronic
chr15:41651357(+) A-I      intronic
chr15:41644198(+) A-I      intronic
chr15:41655672(+) A-I      intronic
chr15:41644975(+) A-I      intronic
chr15:41640894(+) A-I      intronic
chr15:41647322(+) A-I      intronic
chr15:41671269(+) A-I      intronic
chr15:41646583(+) A-I      intronic
chr15:41645429(+) A-I      intronic
chr15:41665047(+) A-I      intronic
chr15:41631040(+) A-I      intronic
chr15:41647545(+) A-I      intronic
chr15:41665445(+) A-I      intronic
chr15:41647237(+) A-I      intronic
chr15:41626935(+) A-I      intronic
chr15:41665513(+) A-I      intronic
chr15:41646471(+) A-I      intronic
chr15:41655799(+) A-I      intronic
chr15:41664072(+) A-I      intronic
chr15:41651899(+) A-I      intronic
chr15:41646527(+) A-I      intronic
chr15:41632121(+) A-I      intronic
chr15:41638288(+) A-I      intronic
chr15:41628229(+) A-I      intronic
chr15:41671318(+) A-I      intronic
chr15:41663059(+) A-I      intronic
chr15:41665850(+) A-I      intronic
chr15:41652296(+) A-I      intronic
chr15:41626051(+) A-I      intronic
chr15:41645372(+) A-I      intronic
chr15:41647939(+) A-I      intronic
chr15:41666905(+) A-I      intronic
chr15:41644835(+) A-I      intronic
chr15:41646592(+) A-I      intronic
chr15:41653427(+) A-I      intronic
chr15:41670706(+) A-I      intronic
chr15:41655409(+) A-I      intronic
chr15:41661682(+) A-I      intronic
chr15:41637041(+) A-I      intronic
chr15:41630876(+) A-I      intronic
chr15:41632019(+) A-I      intronic
chr15:41644219(+) A-I      intronic
chr15:41628243(+) A-I      intronic
chr15:41654835(+) A-I      intronic
chr15:41646485(+) A-I      intronic
chr15:41646456(+) A-I      intronic
chr15:41646542(+) A-I      intronic
chr15:41645402(+) A-I      intronic
chr15:41654293(+) A-I      intronic
chr15:41664017(+) A-I      intronic
chr15:41653414(+) A-I      intronic
chr15:41645574(+) A-I      intronic
chr15:41670720(+) A-I      intronic
chr15:41636989(+) A-I      intronic
chr15:41637045(+) A-I      intronic
chr15:41660451(+) A-I      intronic
chr15:41654290(+) A-I      intronic
chr15:41644166(+) A-I      intronic
chr15:41646635(+) A-I      intronic
chr15:41665180(+) A-I      intronic
chr15:41646652(+) A-I      intronic
chr15:41639855(+) A-I      intronic
chr15:41630934(+) A-I      intronic
chr15:41626012(+) A-I      intronic
chr15:41653523(+) A-I      intronic
chr15:41634916(+) A-I      intronic
chr15:41653336(+) A-I      intronic
chr15:41646569(+) A-I      intronic
chr15:41656491(+) A-I      intronic
chr15:41653189(+) A-I      intronic
chr15:41670729(+) A-I      intronic
chr15:41660239(+) A-I      intronic
chr15:41657472(+) A-I      intronic
chr15:41655365(+) A-I      intronic
chr15:41652436(+) A-I      intronic
chr15:41661661(+) A-I      intronic
chr15:41652614(+) A-I      intronic
chr15:41665198(+) A-I      intronic
chr15:41649472(+) A-I      intronic
chr15:41655404(+) A-I      intronic
chr15:41655060(+) A-I      intronic
chr15:41656986(+) A-I      intronic
chr15:41637918(+) A-I      intronic
chr15:41670804(+) A-I      intronic
chr15:41666776(+) A-I      intronic
chr15:41658125(+) A-I      intronic
chr15:41629400(+) A-I      intronic
chr15:41643942(+) A-I      intronic
chr15:41646524(+) A-I      intronic
chr15:41643977(+) A-I      intronic
chr15:41652449(+) A-I      intronic
chr15:41656526(+) A-I      intronic
chr15:41635581(+) A-I      intronic
chr15:41655734(+) A-I      intronic
chr15:41647906(+) A-I      intronic
chr15:41647643(+) A-I      intronic
chr15:41653470(+) A-I      intronic
chr15:41645442(+) A-I      intronic
chr15:41645474(+) A-I      intronic
chr15:41643712(+) A-I      intronic
chr15:41646342(+) A-I      intronic
chr15:41660165(+) A-I      intronic
chr15:41656645(+) A-I      intronic
chr15:41660450(+) A-I      intronic
chr15:41649401(+) A-I      intronic
chr15:41634826(+) A-I      intronic
chr15:41626067(+) A-I      intronic
chr15:41652454(+) A-I      intronic
chr15:41650839(+) A-I      intronic
chr15:41637445(+) A-I      intronic
chr15:41652366(+) A-I      intronic
chr15:41643746(+) A-I      intronic
chr15:41631073(+) A-I      intronic
chr15:41652423(+) A-I      intronic
chr15:41637327(+) A-I      intronic
chr15:41640539(+) A-I      intronic
chr15:41636648(+) A-I      intronic
chr15:41661795(+) A-I      intronic
chr15:41638966(+) A-I      intronic
chr15:41660166(+) A-I      intronic
chr15:41634915(+) A-I      intronic
chr15:41665130(+) A-I      intronic
chr15:41666159(+) A-I      intronic
chr15:41665857(+) A-I      intronic
chr15:41631043(+) A-I      intronic
chr15:41634778(+) A-I      intronic
chr15:41646427(+) A-I      intronic
chr15:41645475(+) A-I      intronic
chr15:41644881(+) A-I      intronic
chr15:41666171(+) A-I      intronic
chr15:41638322(+) A-I      intronic
chr15:41639797(+) A-I      intronic
chr15:41655396(+) A-I      intronic
chr15:41665076(+) A-I      intronic
chr15:41656529(+) A-I      intronic
chr15:41654762(+) A-I      intronic
chr15:41630195(+) A-I      intronic
chr15:41653201(+) A-I      intronic
chr15:41630322(+) A-I      intronic
chr15:41636206(+) A-I      intronic
chr15:41671413(+) A-I      intronic
chr15:41638772(+) A-I      intronic
chr15:41668102(+) A-I      intronic
chr15:41647424(+) A-I      intronic
chr15:41630316(+) A-I      intronic
chr15:41652462(+) A-I      intronic
chr15:41656967(+) A-I      intronic
chr15:41643842(+) A-I      intronic
chr15:41647892(+) A-I      intronic
chr15:41671317(+) A-I      intronic
chr15:41633280(+) A-I      intronic
chr15:41651929(+) A-I      intronic
chr15:41655791(+) A-I      intronic
chr15:41655592(+) A-I      intronic
chr15:41637372(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NUSAP1
chr15:41643746(+) A-I intron -    22327324
chr15:41643782(+) A-I intron -    22327324
chr15:41637094(+) A-G intron -    22484847
chr15:41643712(+) A-G intron -    22484847
chr15:41643746(+) A-G intron -    22484847
chr15:41643774(+) A-G intron -    22484847
chr15:41643782(+) A-G intron -    22484847
chr15:41644835(+) A-G intron -    22484847
chr15:41644881(+) A-G intron -    22484847
chr15:41645429(+) A-G intron -    22484847
chr15:41645442(+) A-G intron -    22484847
chr15:41645475(+) A-G intron -    22484847
chr15:41645478(+) A-G intron -    22484847
chr15:41645549(+) A-G intron -    22484847
chr15:41646342(+) A-G intron -    22484847
chr15:41646456(+) A-G intron -    22484847
chr15:41646527(+) A-G intron -    22484847
chr15:41646635(+) A-G intron -    22484847
chr15:41647424(+) A-G intron -    22484847
chr15:41657922(+) C-T intron -    22484847
chr15:41660166(+) A-G intron -    22484847
chr15:41660451(+) A-G intron -    22484847
chr15:41660482(+) C-T intron -    22484847
chr15:41662222(+) A-G intron -    22484847
chr15:41665124(+) A-G intron -    22484847
chr15:41665125(+) A-G intron -    22484847
chr15:41665126(+) A-G intron -    22484847
chr15:41665128(+) A-G intron -    22484847
chr15:41665130(+) A-G intron -    22484847
chr15:41665513(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NUSAP1
chr15:41624990-41624991(+) m6A 5'UTR//exon       24981863
chr15:41625043-41625044(+) m6A 5'UTR//exon       24981863//22608085
chr15:41625096-41625097(+) m6A 5'UTR//exon       24981863//22608085
chr15:41625183-41625184(+) m6A CDS//exon       24981863//22575960
chr15:41625210-41625211(+) m6A CDS//exon//intron       24981863//22575960
chr15:41634621-41634622(+) m6A CDS//exon//intron       24981863
chr15:41641307-41641308(+) m6A 3'UTR//CDS//exon//intron       24981863
chr15:41641331-41641332(+) m6A 3'UTR//CDS//exon//intron       24981863
chr15:41641369-41641370(+) m6A 3'UTR//CDS//exon//intron       24981863
chr15:41641394-41641395(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr15:41641412-41641413(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr15:41641425-41641426(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr15:41641457-41641458(+) m6A exon//intron       24981863
chr15:41641468-41641469(+) m6A exon//intron       24981863
chr15:41648300-41648301(+) m6A CDS//exon//intron       24981863//27773535
chr15:41648319-41648320(+) m6A CDS//exon//intron       24981863//27773535
chr15:41650419-41650420(+) m6A CDS//exon//intron       24981863//27773535
chr15:41650431-41650432(+) m6A CDS//exon//intron       27773535
chr15:41650449-41650450(+) m6A CDS//exon//intron       27773535
chr15:41658054-41658055(+) m6A 3'UTR//exon//intron       -
chr15:41663773-41663774(+) m6A 3'UTR//CDS//exon       24981863
chr15:41663842-41663843(+) m6A 3'UTR//CDS//exon       24981863//27773535
chr15:41663857-41663858(+) m6A 3'UTR//CDS//exon       24981863//27773535
chr15:41667947-41667948(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr15:41667967-41667968(+) m6A CDS//exon//intron       24981863//27773535
chr15:41668015-41668016(+) m6A CDS//exon//intron       24981863//27773535
chr15:41669403-41669404(+) m6A 3'UTR//CDS//exon       24981863//27773535
chr15:41669473-41669474(+) m6A CDS//exon       24981863//27773535
chr15:41669481-41669482(+) m6A CDS//exon       24981863//27773535
chr15:41669497-41669498(+) m6A CDS//exon       24981863//27773535
chr15:41672775-41672776(+) m6A 3'UTR//exon       27773535
chr15:41673100-41673101(+) m6A 3'UTR       27773535
chr15:41673139-41673140(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-3174
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
NUSAP1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-3174
Interactor2: NUSAP1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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