Detail Information

Basic Information:


  VIRBase ID:  

HHID00072142

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-466:           HIVEP2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-466 HIVEP2
miRBase
Accession/Entrez ID
MIMAT0015002 3097
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - HIV-EP2//MBP-2//MIBP1//MRD43//SHN2//ZAS2//ZNF40B

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-466
rs1368640537 chr3:31161720    G/A
rs1392123954 chr3:31161725    G/A
rs1436733428 chr3:31161724    C/CGTGTAT
rs1460320210 chr3:31161721    T/C
rs148367480 chr3:31161715    T/G
rs540140185 chr3:31161736    T/C
rs548026272 chr3:31161724    C/T
rs1044765198 chr3:31161730    T/C
rs1055171867 chr3:31161731    G/C
rs116476604 chr3:31161729    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HIVEP2
chr6:143078164(-) A-I      intronic
chr6:143239126(-) A-I      intronic
chr6:143239082(-) A-I      intronic
chr6:143239080(-) A-I      intronic
chr6:143239077(-) A-I      intronic
chr6:143114980(-) A-I      intronic
chr6:143114979(-) A-I      intronic
chr6:143114974(-) A-I      intronic
chr6:143114964(-) A-I      intronic
chr6:143097744(-) A-I      intronic
chr6:143078128(-) A-I      intronic
chr6:143256624(-) A-I      intronic
chr6:143097740(-) A-I      intronic
chr6:143097728(-) A-I      intronic
chr6:143097725(-) A-I      intronic
chr6:143078096(-) A-I      intronic
chr6:143239128(-) A-I      intronic
chr6:143078140(-) A-I      intronic
chr6:143078156(-) A-I      intronic
chr6:143078160(-) A-I      intronic
chr6:143242012(-) A-I      intronic
chr6:143256574(-) A-I      intronic
chr6:143256577(-) A-I      intronic
chr6:143257395(-) A-I      intronic
chr6:143244290(-) A-I      intronic
chr6:143239429(-) A-I      intronic
chr6:143239161(-) A-I      intronic
chr6:143239134(-) A-I      intronic
chr6:143227123(-) A-I      intronic
chr6:143227018(-) A-I      intronic
chr6:143210388(-) A-I      intronic
chr6:143210375(-) A-I      intronic
chr6:143209557(-) A-I      intronic
chr6:143209522(-) A-I      intronic
chr6:143198104(-) A-I      intronic
chr6:143198103(-) A-I      intronic
chr6:143197942(-) A-I      intronic
chr6:143197939(-) A-I      intronic
chr6:143179935(-) A-I      intronic
chr6:143179934(-) A-I      intronic
chr6:143179901(-) A-I      intronic
chr6:143170937(-) A-I      intronic
chr6:143169813(-) A-I      intronic
chr6:143131836(-) A-I      intronic
chr6:143131817(-) A-I      intronic
chr6:143131816(-) A-I      intronic
chr6:143131812(-) A-I      intronic
chr6:143130910(-) A-I      intronic
chr6:143239137(-) A-I      intronic
chr6:143239127(-) A-I      intronic
chr6:143239092(-) A-I      intronic
chr6:143231656(-) A-I      intronic
chr6:143231652(-) A-I      intronic
chr6:143180004(-) A-I      intronic
chr6:143115000(-) A-I      intronic
chr6:143114997(-) A-I      intronic
chr6:143131736(-) A-I      intronic
chr6:143114932(-) A-I      intronic
chr6:143114942(-) A-I      intronic
chr6:143114944(-) A-I      intronic
chr6:143100662(-) A-I      intronic
chr6:143100657(-) A-I      intronic
chr6:143097751(-) A-I      intronic
chr6:143097815(-) A-I      intronic
chr6:143097912(-) A-I      intronic
chr6:143097921(-) A-I      intronic
chr6:143097936(-) A-I      intronic
chr6:143098685(-) A-I      intronic
chr6:143100506(-) A-I      intronic
chr6:143257545(-) A-I      intronic
chr6:143257500(-) A-I      intronic
chr6:143257397(-) A-I      intronic
chr6:143257186(-) A-I      intronic
chr6:143257138(-) A-I      intronic
chr6:143256558(-) A-I      intronic
chr6:143244416(-) A-I      intronic
chr6:143244390(-) A-I      intronic
chr6:143244385(-) A-I      intronic
chr6:143244322(-) A-I      intronic
chr6:143244300(-) A-I      intronic
chr6:143256441(-) A-I      intronic
chr6:143239009(-) A-I      intronic
chr6:143244374(-) A-I      intronic
chr6:143257441(-) A-I      intronic
chr6:143238980(-) A-I      intronic
chr6:143153083(-) A-I      intronic
chr6:143100323(-) A-I      intronic
chr6:143209452(-) A-I      intronic
chr6:143170929(-) A-I      intronic
chr6:143108298(-) A-I      intronic
chr6:143169816(-) A-I      intronic
chr6:143131735(-) A-I      intronic
chr6:143244381(-) A-I      intronic
chr6:143100675(-) A-I      intronic
chr6:143139557(-) A-I      intronic
chr6:143238981(-) A-I      intronic
chr6:143239095(-) A-I      intronic
chr6:143239051(-) A-I      intronic
chr6:143242550(-) A-I      intronic
chr6:143256604(-) A-I      intronic
chr6:143244369(-) A-I      intronic
chr6:143209491(-) A-I      intronic
chr6:143257150(-) A-I      intronic
chr6:143130827(-) A-I      intronic
chr6:143097766(-) A-I      intronic
chr6:143138921(-) A-I      intronic
chr6:143180888(-) A-I      intronic
chr6:143130809(-) A-I      intronic
chr6:143131733(-) A-I      intronic
chr6:143100645(-) A-I      intronic
chr6:143100710(-) A-I      ncRNA
chr6:143257498(-) A-I      intronic
chr6:143256586(-) A-I      intronic
chr6:143231655(-) A-I      intronic
chr6:143170951(-) A-I      intronic
chr6:143097715(-) A-I      intronic
chr6:143257499(-) A-I      intronic
chr6:143256623(-) A-I      intronic
chr6:143239073(-) A-I      intronic
chr6:143231744(-) A-I      intronic
chr6:143169814(-) A-I      intronic
chr6:143131742(-) A-I      intronic
chr6:143257494(-) A-I      intronic
chr6:143256603(-) A-I      intronic
chr6:143239456(-) A-I      intronic
chr6:143256514(-) A-I      intronic
chr6:143231505(-) A-I      intronic
chr6:143241868(-) A-I      intronic
chr6:143256562(-) A-I      intronic
chr6:143210543(-) A-I      intronic
chr6:143209482(-) A-I      intronic
chr6:143210436(-) A-I      intronic
chr6:143239090(-) A-I      intronic
chr6:143239135(-) A-I      intronic
chr6:143179866(-) A-I      intronic
chr6:143097797(-) A-I      intronic
chr6:143256440(-) A-I      intronic
chr6:143256564(-) A-I      intronic
chr6:143210551(-) A-I      intronic
chr6:143097807(-) A-I      intronic
chr6:143098673(-) A-I      intronic
chr6:143239050(-) A-I      intronic
chr6:143238935(-) A-I      intronic
chr6:143256655(-) A-I      intronic
chr6:143209520(-) A-I      intronic
chr6:143097784(-) A-I      intronic
chr6:143210593(-) A-I      intronic
chr6:143238943(-) A-I      intronic
chr6:143239005(-) A-I      intronic
chr6:143239182(-) A-I      intronic
chr6:143257451(-) A-I      intronic
chr6:143242068(-) A-I      intronic
chr6:143238989(-) A-I      intronic
chr6:143209457(-) A-I      intronic
chr6:143242468(-) A-I      intronic
chr6:143257468(-) A-I      intronic
chr6:143130868(-) A-I      intronic
chr6:143242060(-) A-I      intronic
chr6:143209407(-) A-I      intronic
chr6:143131830(-) A-I      intronic
chr6:143100546(-) A-I      intronic
chr6:143257426(-) A-I      intronic
chr6:143256591(-) A-I      intronic
chr6:143257118(-) A-I      intronic
chr6:143169751(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED HIVEP2
chr6:143077279(-) A-I intron -    15342557
chr6:143077295(-) A-I intron -    15342557
chr6:143077323(-) A-I intron -    15342557   //19478186
chr6:143077333(-) A-I intron -    15342557   //19478186
chr6:143077334(-) A-I intron -    15342557
chr6:143078065(-) A-I intron -    15342557
chr6:143078091(-) A-I intron -    15342557
chr6:143078099(-) A-I intron -    15342557
chr6:143078136(-) A-I intron -    15342557
chr6:143078144(-) A-I intron -    15342557
chr6:143078145(-) A-I intron -    15342557
chr6:143078146(-) A-I intron -    15342557
chr6:143078148(-) A-I intron -    15342557
chr6:143078174(-) A-I intron -    15342557
chr6:143078176(-) A-I intron -    15342557
chr6:143078178(-) A-I intron -    15342557
chr6:143138921(-) A-I intron -    15545495
chr6:143097797(-) A-G intron -    22484847
chr6:143097949(-) A-G intron -    22484847
chr6:143100516(-) T-C intron -    22484847
chr6:143100546(-) A-G intron -    22484847
chr6:143130809(-) A-G intron -    22484847
chr6:143130868(-) A-G intron -    22484847
chr6:143130911(-) A-G intron -    22484847
chr6:143130920(-) G-A intron -    22484847
chr6:143130930(-) G-A intron -    22484847
chr6:143131733(-) A-G intron -    22484847
chr6:143131735(-) A-G intron -    22484847
chr6:143131742(-) A-G intron -    22484847
chr6:143131830(-) A-G intron -    22484847
chr6:143131837(-) A-G intron -    22484847
chr6:143153083(-) A-G intron -    22484847
chr6:143153329(-) G-T intron -    22484847
chr6:143169751(-) A-G intron -    22484847
chr6:143169814(-) A-G intron -    22484847
chr6:143169816(-) A-G intron -    22484847
chr6:143170929(-) A-G intron -    22484847
chr6:143170951(-) A-G intron -    22484847
chr6:143209407(-) A-G intron -    22484847
chr6:143209452(-) A-G intron -    22484847
chr6:143209481(-) A-G intron -    22484847
chr6:143209491(-) A-G intron -    22484847
chr6:143209520(-) A-G intron -    22484847
chr6:143210543(-) A-G intron -    22484847
chr6:143210551(-) A-G intron -    22484847
chr6:143231505(-) A-G intron -    22484847
chr6:143231744(-) A-G intron -    22484847
chr6:143239005(-) A-G intron -    22484847
chr6:143239050(-) A-G intron -    22484847
chr6:143239073(-) A-G intron -    22484847
chr6:143244369(-) A-G intron -    22484847
chr6:143244374(-) A-G intron -    22484847
chr6:143244381(-) A-G intron -    22484847
chr6:143256440(-) A-G intron -    22484847
chr6:143256441(-) A-G intron -    22484847
chr6:143256503(-) A-G intron -    22484847
chr6:143256562(-) A-G intron -    22484847
chr6:143256564(-) A-G intron -    22484847
chr6:143256586(-) A-G intron -    22484847
chr6:143256591(-) A-G intron -    22484847
chr6:143256602(-) A-G intron -    22484847
chr6:143256603(-) A-G intron -    22484847
chr6:143256604(-) A-G intron -    22484847
chr6:143256650(-) A-G intron -    22484847
chr6:143257118(-) A-G intron -    22484847
chr6:143257150(-) A-G intron -    22484847
chr6:143257166(-) A-G intron -    22484847
chr6:143257211(-) A-G intron -    22484847
chr6:143257426(-) A-G intron -    22484847
chr6:143257441(-) A-G intron -    22484847
chr6:143257451(-) A-G intron -    22484847
chr6:143257468(-) A-G intron -    22484847
chr6:143257478(-) A-G intron -    22484847
chr6:143257494(-) A-G intron -    22484847
chr6:143077323(-) A-G intron -    22484847
chr6:143077333(-) A-G intron -    22484847
chr6:143246171(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase HIVEP2
chr6:143072676-143072677(-) m6A 3'UTR       27773535
chr6:143072876-143072877(-) m6A 3'UTR       24284625//24981863//27773535
chr6:143072991-143072992(-) m6A 3'UTR       24284625//27773535
chr6:143073032-143073033(-) m6A 3'UTR       24284625//27773535
chr6:143073073-143073074(-) m6A 3'UTR       24284625//27773535//27371828
chr6:143073102-143073103(-) m6A 3'UTR       24284625//24981863//27773535//27371828
chr6:143073153-143073154(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22608085
chr6:143073224-143073225(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr6:143073271-143073272(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr6:143073288-143073289(-) m6A 3'UTR       24981863//26404942//27773535//22608085
chr6:143073800-143073801(-) m6A 3'UTR       26404942
chr6:143073805-143073806(-) m6A 3'UTR       26404942
chr6:143073826-143073827(-) m6A 3'UTR       26404942
chr6:143073859-143073860(-) m6A 3'UTR       26404942
chr6:143073888-143073889(-) m6A 3'UTR       26404942
chr6:143074059-143074060(-) m6A 3'UTR       27773535
chr6:143074226-143074227(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085
chr6:143074322-143074323(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr6:143074380-143074381(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074400-143074401(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074462-143074463(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074474-143074475(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074505-143074506(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074602-143074603(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074621-143074622(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074646-143074647(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074663-143074664(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143074763-143074764(-) m6A CDS       24284625//27773535
chr6:143074999-143075000(-) m6A CDS       24284625//24981863//27773535
chr6:143075018-143075019(-) m6A CDS       24981863//27773535
chr6:143080947-143080948(-) m6A CDS       24981863//27773535
chr6:143081041-143081042(-) m6A CDS       27773535
chr6:143081166-143081167(-) m6A CDS       27773535//27371828
chr6:143081202-143081203(-) m6A CDS       27773535//27371828
chr6:143081311-143081312(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143081374-143081375(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143081382-143081383(-) Cm CDS       -
chr6:143081383-143081384(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143081389-143081390(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143081394-143081395(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143081401-143081402(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:143081532-143081533(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr6:143081633-143081634(-) m6A CDS       24209618//27773535//22608085
chr6:143082612-143082613(-) m6A CDS       27773535
chr6:143082698-143082699(-) m6A CDS       27773535
chr6:143089556-143089557(-) m6A CDS       27773535
chr6:143089625-143089626(-) m6A CDS       27773535
chr6:143089637-143089638(-) m6A CDS       27773535
chr6:143089667-143089668(-) m6A CDS       27773535
chr6:143090907-143090908(-) m6A CDS       24981863
chr6:143090948-143090949(-) m6A CDS       24981863//27371828//22608085
chr6:143090992-143090993(-) m6A CDS       24981863//27371828//27773536//22608085
chr6:143091013-143091014(-) m6A CDS       24981863//27371828//27773536//22608085
chr6:143091145-143091146(-) m6A CDS       24981863//22608085
chr6:143091301-143091302(-) m6A CDS       27773535//27371828//27773536
chr6:143091399-143091400(-) m6A CDS       24284625//24981863//27773535//27371828//27773536
chr6:143091418-143091419(-) m6A CDS       24284625//24981863//27773535//27371828//27773536
chr6:143091430-143091431(-) m6A CDS       24284625//24981863//27773535//27371828
chr6:143091474-143091475(-) m6A CDS       24284625//24981863//27773535//27371828
chr6:143091515-143091516(-) m6A CDS       24284625//24981863//27773535
chr6:143091641-143091642(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085
chr6:143091746-143091747(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27371828//22608085
chr6:143091976-143091977(-) m6A CDS       27773535
chr6:143092000-143092001(-) m6A CDS       27773535
chr6:143092043-143092044(-) m6A CDS       27773535
chr6:143092074-143092075(-) m6A CDS       27773535
chr6:143092130-143092131(-) m6A CDS       27773535
chr6:143092292-143092293(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143092320-143092321(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143092390-143092391(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085
chr6:143092474-143092475(-) m6A CDS       24284625//27371828
chr6:143092913-143092914(-) m6A CDS       -
chr6:143093099-143093100(-) m6A CDS       24981863//27773535//27371828
chr6:143093178-143093179(-) m6A CDS       27773535//27371828
chr6:143093289-143093290(-) m6A CDS       24284625//24981863//27773535//27371828
chr6:143093369-143093370(-) m6A CDS       24284625//24981863//26404942//27773535//27371828
chr6:143093412-143093413(-) m6A CDS       24284625//24981863//26404942//27773535//27371828
chr6:143093496-143093497(-) m6A CDS       24284625//27773535//27371828
chr6:143093512-143093513(-) m6A CDS       24284625//27773535//27371828
chr6:143093524-143093525(-) m6A CDS       24284625//27773535
chr6:143093629-143093630(-) m6A CDS       24284625//27773535
chr6:143093637-143093638(-) m6A CDS       24284625//27773535
chr6:143093682-143093683(-) m6A CDS       -
chr6:143093752-143093753(-) m6A CDS       24981863//27773535
chr6:143093794-143093795(-) m6A CDS       26404942//27773535//22608085
chr6:143093807-143093808(-) m6A CDS       26404942//27773535//22608085
chr6:143093896-143093897(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143093905-143093906(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143093918-143093919(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143093926-143093927(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143093946-143093947(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143093980-143093981(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143094099-143094100(-) m6A CDS       27773535
chr6:143094310-143094311(-) m6A CDS       27773535
chr6:143094324-143094325(-) m6A CDS       27773535
chr6:143094366-143094367(-) m6A CDS       27773535
chr6:143094741-143094742(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143094759-143094760(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143094771-143094772(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143094777-143094778(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143094964-143094965(-) m6A CDS       24981863//26404942//27773535//27371828//22608085
chr6:143095036-143095037(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085
chr6:143095047-143095048(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143095099-143095100(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr6:143095193-143095194(-) m6A CDS       24284625//24981863//26404942
chr6:143095257-143095258(-) m6A CDS       24284625//24981863
chr6:143095275-143095276(-) m6A CDS       24284625//24981863
chr6:143095329-143095330(-) m6A CDS       24981863//26404942//27773535
chr6:143095362-143095363(-) m6A CDS       24981863//27773535
chr6:143095399-143095400(-) m6A CDS       27773535
chr6:143095465-143095466(-) m6A CDS       24981863//27773535
chr6:143095671-143095672(-) m6A CDS       24284625//27773535//27371828
chr6:143095705-143095706(-) m6A CDS       24284625//24209618//27773535//27371828//22608085
chr6:143095715-143095716(-) Cm CDS       -
chr6:143095743-143095744(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095788-143095789(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095794-143095795(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095820-143095821(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095848-143095849(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095861-143095862(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095870-143095871(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095889-143095890(-) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095902-143095903(-) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095934-143095935(-) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr6:143095974-143095975(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr6:143095984-143095985(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr6:143096063-143096064(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr6:143096088-143096089(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr6:143096195-143096196(-) m6A 5'UTR       24284625//24981863//27773535//22608085
chr6:143096230-143096231(-) m6A 5'UTR       22608085
chr6:143096242-143096243(-) m6A 5'UTR       22608085
chr6:143097291-143097292(-) m6A 5'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-466
Exosome Serum     18589210
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
HIVEP2
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-466
Interactor2: HIVEP2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

Starting a new search, please wait ...