Basic Information:

  VIRBase ID:  

HHID00071973

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-3116:  MIMAT0014978          HELLS:  NM_001289073     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-3116	HELLS
miRBase Accession/Entrez ID	MIMAT0014978	3070
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	ICF4//LSH//Nbla10143//PASG//SMARCA6

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-3116	rs1219045075 chr1:62078801    A/C rs1319224201 chr1:62078848    G/A rs1463642651 chr1:62078807    T/C rs374995682 chr1:62078798    C/T rs762706262 chr1:62078805    T/A rs773656436 chr1:62078844    T/C rs888597642 chr1:62078804    A/G rs930143851 chr1:62078797    C/T rs1454235335 chr1:62078836    G/C rs192207383 chr1:62078831    G/A rs371192161 chr1:62078812    G/A rs547085593 chr1:62078814    C/T

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HELLS	chr10:96340140(+) A-I      intronic chr10:96372496(+) A-I      3'UTR chr10:96372522(+) A-I      3'UTR chr10:96314930(+) A-I      intronic chr10:96315486(+) A-I      intronic chr10:96315631(+) A-I      intronic chr10:96323038(+) A-I      intronic chr10:96325282(+) A-I      intronic chr10:96325750(+) A-I      intronic chr10:96327784(+) A-I      intronic chr10:96338372(+) A-I      intronic chr10:96339110(+) A-I      intronic chr10:96339378(+) A-I      intronic chr10:96339399(+) A-I      intronic chr10:96339438(+) A-I      intronic chr10:96340003(+) A-I      intronic chr10:96325743(+) A-I      intronic chr10:96329162(+) A-I      ncRNA chr10:96367742(+) A-I      NonSyn:Gln->Arg chr10:96329960(+) A-I      ncRNA chr10:96329899(+) A-I      ncRNA chr10:96329903(+) A-I      ncRNA chr10:96367668(+) A-I      Syn:Leu->Leu chr10:96329121(+) A-I      ncRNA chr10:96367711(+) A-I      NonSyn:Ile->Val chr10:96329201(+) A-I      ncRNA chr10:96329911(+) A-I      ncRNA chr10:96329928(+) A-I      ncRNA chr10:96329130(+) A-I      ncRNA chr10:96367716(+) A-I      Syn:Ser->Ser chr10:96329138(+) A-I      ncRNA chr10:96367744(+) A-I      NonSyn:Ser->Gly chr10:96329902(+) A-I      ncRNA chr10:96367674(+) A-I      Syn:Thr->Thr chr10:96367685(+) A-I      NonSyn:His->Arg chr10:96367670(+) A-I      NonSyn:Glu->Gly chr10:96329057(+) A-I      ncRNA chr10:96322970(+) A-I      intronic chr10:96325013(+) A-I      intronic chr10:96327264(+) A-I      intronic chr10:96309844(+) A-I      intronic chr10:96359982(+) A-I      intronic chr10:96323636(+) A-I      intronic chr10:96309857(+) A-I      intronic chr10:96327284(+) A-I      intronic chr10:96323019(+) A-I      intronic chr10:96327399(+) A-I      intronic chr10:96310055(+) A-I      intronic chr10:96325012(+) A-I      intronic chr10:96323733(+) A-I      intronic chr10:96327767(+) A-I      intronic chr10:96327504(+) A-I      intronic chr10:96309726(+) A-I      intronic chr10:96310161(+) A-I      intronic chr10:96327136(+) A-I      intronic chr10:96339051(+) A-I      intronic chr10:96310219(+) A-I      intronic chr10:96324586(+) A-I      intronic chr10:96348855(+) A-I      intronic chr10:96311303(+) A-I      intronic chr10:96310311(+) A-I      intronic chr10:96310305(+) A-I      intronic chr10:96309700(+) A-I      intronic chr10:96321300(+) A-I      intronic chr10:96325711(+) A-I      intronic chr10:96320618(+) A-I      intronic chr10:96310391(+) A-I      intronic chr10:96310445(+) A-I      intronic chr10:96324541(+) A-I      intronic chr10:96348684(+) A-I      intronic chr10:96310489(+) A-I      intronic chr10:96324908(+) A-I      intronic chr10:96311099(+) A-I      intronic chr10:96311162(+) A-I      intronic chr10:96311170(+) A-I      intronic chr10:96327522(+) A-I      intronic chr10:96348310(+) A-I      intronic chr10:96310177(+) A-I      intronic chr10:96338363(+) A-I      intronic chr10:96327550(+) A-I      intronic chr10:96327556(+) A-I      intronic chr10:96327435(+) A-I      intronic chr10:96327717(+) A-I      intronic chr10:96324626(+) A-I      intronic chr10:96311171(+) A-I      intronic chr10:96310525(+) A-I      intronic chr10:96359969(+) A-I      intronic chr10:96327722(+) A-I      intronic chr10:96327585(+) A-I      intronic chr10:96327771(+) A-I      intronic chr10:96311231(+) A-I      intronic chr10:96327796(+) A-I      intronic chr10:96311662(+) A-I      intronic chr10:96339099(+) A-I      intronic chr10:96324879(+) A-I      intronic chr10:96324887(+) A-I      intronic chr10:96339075(+) A-I      intronic chr10:96338182(+) A-I      intronic chr10:96324907(+) A-I      intronic chr10:96324916(+) A-I      intronic chr10:96327462(+) A-I      intronic chr10:96321016(+) A-I      intronic chr10:96310175(+) A-I      intronic chr10:96311687(+) A-I      intronic chr10:96324933(+) A-I      intronic chr10:96324935(+) A-I      intronic chr10:96321745(+) A-I      intronic chr10:96313435(+) A-I      intronic chr10:96324936(+) A-I      intronic chr10:96324944(+) A-I      intronic chr10:96324979(+) A-I      intronic chr10:96325020(+) A-I      intronic chr10:96310299(+) A-I      intronic chr10:96325037(+) A-I      intronic chr10:96323116(+) A-I      intronic chr10:96349469(+) A-I      intronic chr10:96338198(+) A-I      intronic chr10:96325789(+) A-I      intronic chr10:96326564(+) A-I      intronic chr10:96348376(+) A-I      intronic chr10:96325289(+) A-I      intronic chr10:96322939(+) A-I      intronic chr10:96325672(+) A-I      intronic chr10:96337936(+) A-I      intronic chr10:96338239(+) A-I      intronic chr10:96313455(+) A-I      intronic chr10:96313471(+) A-I      intronic chr10:96313488(+) A-I      intronic chr10:96359236(+) A-I      intronic chr10:96327447(+) A-I      intronic chr10:96323707(+) A-I      intronic chr10:96338301(+) A-I      intronic chr10:96348663(+) A-I      intronic chr10:96318498(+) A-I      intronic chr10:96325685(+) A-I      intronic chr10:96315029(+) A-I      intronic chr10:96315406(+) A-I      intronic chr10:96338313(+) A-I      intronic chr10:96322917(+) A-I      intronic chr10:96315408(+) A-I      intronic chr10:96315412(+) A-I      intronic chr10:96320693(+) A-I      intronic chr10:96348649(+) A-I      intronic chr10:96340122(+) A-I      intronic chr10:96315515(+) A-I      intronic chr10:96325237(+) A-I      intronic chr10:96339107(+) A-I      intronic chr10:96327510(+) A-I      intronic chr10:96318488(+) A-I      intronic chr10:96348421(+) A-I      intronic chr10:96310169(+) A-I      intronic chr10:96325006(+) A-I      intronic chr10:96338347(+) A-I      intronic chr10:96338353(+) A-I      intronic chr10:96325191(+) A-I      intronic chr10:96318632(+) A-I      intronic chr10:96319226(+) A-I      intronic chr10:96319332(+) A-I      intronic chr10:96319344(+) A-I      intronic chr10:96319377(+) A-I      intronic chr10:96359862(+) A-I      intronic chr10:96319386(+) A-I      intronic chr10:96339197(+) A-I      intronic chr10:96325724(+) A-I      intronic chr10:96315410(+) A-I      intronic chr10:96337656(+) A-I      intronic chr10:96325782(+) A-I      intronic chr10:96320197(+) A-I      intronic chr10:96320557(+) A-I      intronic chr10:96325904(+) A-I      intronic chr10:96320558(+) A-I      intronic chr10:96320651(+) A-I      intronic chr10:96320652(+) A-I      intronic chr10:96320659(+) A-I      intronic chr10:96326438(+) A-I      intronic chr10:96326634(+) A-I      intronic chr10:96337652(+) A-I      intronic chr10:96320670(+) A-I      intronic chr10:96313075(+) A-I      intronic chr10:96320692(+) A-I      intronic chr10:96321018(+) A-I      intronic chr10:96309807(+) A-I      intronic chr10:96320604(+) A-I      intronic chr10:96327536(+) A-I      intronic chr10:96338304(+) A-I      intronic chr10:96348358(+) A-I      intronic chr10:96321357(+) A-I      intronic chr10:96348833(+) A-I      intronic chr10:96321364(+) A-I      intronic chr10:96321475(+) A-I      intronic chr10:96323624(+) A-I      intronic chr10:96327453(+) A-I      intronic chr10:96328699(+) A-I      intronic chr10:96339097(+) A-I      intronic chr10:96321486(+) A-I      intronic chr10:96327766(+) A-I      intronic chr10:96321498(+) A-I      intronic chr10:96321955(+) A-I      intronic chr10:96326647(+) A-I      intronic chr10:96327518(+) A-I      intronic chr10:96321960(+) A-I      intronic chr10:96321973(+) A-I      intronic chr10:96321989(+) A-I      intronic chr10:96324943(+) A-I      intronic chr10:96321998(+) A-I      intronic chr10:96322010(+) A-I      intronic chr10:96322927(+) A-I      intronic chr10:96322933(+) A-I      intronic chr10:96308495(+) A-I      intronic chr10:96322957(+) A-I      intronic chr10:96338362(+) A-I      intronic chr10:96323668(+) A-I      intronic chr10:96327160(+) A-I      intronic chr10:96339032(+) A-I      intronic chr10:96339044(+) A-I      intronic chr10:96327182(+) A-I      intronic chr10:96323671(+) A-I      intronic chr10:96308496(+) A-I      intronic chr10:96338229(+) A-I      intronic chr10:96321905(+) A-I      intronic chr10:96339059(+) A-I      intronic chr10:96337665(+) A-I      intronic chr10:96325368(+) A-I      intronic chr10:96327235(+) A-I      intronic chr10:96348789(+) A-I      intronic chr10:96308501(+) A-I      intronic chr10:96339360(+) A-I      intronic chr10:96308604(+) A-I      intronic chr10:96308630(+) A-I      intronic chr10:96326425(+) A-I      intronic chr10:96320666(+) A-I      intronic chr10:96309734(+) A-I      intronic chr10:96327238(+) A-I      intronic chr10:96309778(+) A-I      intronic chr10:96311678(+) A-I      intronic chr10:96309781(+) A-I      intronic chr10:96319342(+) A-I      intronic chr10:96309834(+) A-I      intronic chr10:96370098(+) A-I      3'UTR chr10:96372463(+) A-I      3'UTR chr10:96372482(+) A-I      3'UTR chr10:96370139(+) A-I      3'UTR chr10:96372405(+) A-I      3'UTR chr10:96372526(+) A-I      3'UTR chr10:96372630(+) A-I      3'UTR chr10:96370463(+) A-I      3'UTR chr10:96372456(+) A-I      3'UTR chr10:96372419(+) A-I      3'UTR chr10:96370402(+) A-I      3'UTR chr10:96372444(+) A-I      3'UTR chr10:96370446(+) A-I      3'UTR chr10:96372552(+) A-I      3'UTR chr10:96372506(+) A-I      3'UTR chr10:96370457(+) A-I      3'UTR chr10:96367682(+) A-I      NonSyn:His->Arg chr10:96367759(+) A-I      NonSyn:Ser->Gly chr10:96329017(+) A-I      ncRNA chr10:96329982(+) A-I      ncRNA chr10:96367743(+) A-I      Syn:Gln->Gln chr10:96329213(+) A-I      ncRNA chr10:96367756(+) A-I      NonSyn:Thr->Ala chr10:96367729(+) A-I      NonSyn:Thr->Ala chr10:96329372(+) A-I      ncRNA chr10:96329161(+) A-I      ncRNA chr10:96310397(+) A-I      intronic chr10:96312539(+) A-I      intronic chr10:96325404(+) A-I      intronic chr10:96324894(+) A-I      intronic chr10:96327289(+) A-I      intronic chr10:96319469(+) A-I      intronic chr10:96325700(+) A-I      intronic chr10:96324947(+) A-I      intronic chr10:96325704(+) A-I      intronic chr10:96327747(+) A-I      intronic chr10:96321723(+) A-I      intronic chr10:96315010(+) A-I      intronic chr10:96326686(+) A-I      intronic chr10:96323126(+) A-I      intronic chr10:96327554(+) A-I      intronic chr10:96340068(+) A-I      intronic chr10:96327927(+) A-I      intronic chr10:96327316(+) A-I      intronic chr10:96337910(+) A-I      intronic chr10:96325024(+) A-I      intronic chr10:96324830(+) A-I      intronic chr10:96325459(+) A-I      intronic chr10:96324934(+) A-I      intronic chr10:96311137(+) A-I      intronic chr10:96322978(+) A-I      intronic chr10:96320657(+) A-I      intronic chr10:96319475(+) A-I      intronic chr10:96320332(+) A-I      intronic chr10:96337429(+) A-I      intronic chr10:96310202(+) A-I      intronic chr10:96311066(+) A-I      intronic chr10:96320291(+) A-I      intronic chr10:96325762(+) A-I      intronic chr10:96327461(+) A-I      intronic chr10:96327112(+) A-I      intronic chr10:96321906(+) A-I      intronic chr10:96337428(+) A-I      intronic chr10:96324983(+) A-I      intronic chr10:96324535(+) A-I      intronic chr10:96325295(+) A-I      intronic chr10:96311273(+) A-I      intronic chr10:96327477(+) A-I      intronic chr10:96324918(+) A-I      intronic chr10:96327828(+) A-I      intronic chr10:96339123(+) A-I      intronic chr10:96321888(+) A-I      intronic chr10:96327718(+) A-I      intronic chr10:96327464(+) A-I      intronic chr10:96311073(+) A-I      intronic chr10:96328728(+) A-I      intronic chr10:96325325(+) A-I      intronic chr10:96338216(+) A-I      intronic chr10:96322982(+) A-I      intronic chr10:96339411(+) A-I      intronic chr10:96325824(+) A-I      intronic chr10:96338357(+) A-I      intronic chr10:96337911(+) A-I      intronic chr10:96322979(+) A-I      intronic chr10:96326673(+) A-I      intronic chr10:96309708(+) A-I      intronic chr10:96325291(+) A-I      intronic chr10:96338309(+) A-I      intronic chr10:96321362(+) A-I      intronic chr10:96325805(+) A-I      intronic chr10:96337473(+) A-I      intronic chr10:96324482(+) A-I      intronic chr10:96324458(+) A-I      intronic chr10:96326621(+) A-I      intronic chr10:96337496(+) A-I      intronic chr10:96345606(+) A-I      intronic chr10:96348854(+) A-I      intronic chr10:96359928(+) A-I      intronic chr10:96325079(+) A-I      intronic chr10:96315658(+) A-I      intronic chr10:96337999(+) A-I      intronic chr10:96321974(+) A-I      intronic chr10:96339134(+) A-I      intronic chr10:96320368(+) A-I      intronic chr10:96325326(+) A-I      intronic chr10:96325080(+) A-I      intronic chr10:96325009(+) A-I      intronic chr10:96319303(+) A-I      intronic chr10:96320266(+) A-I      intronic chr10:96324942(+) A-I      intronic chr10:96310165(+) A-I      intronic chr10:96320268(+) A-I      intronic chr10:96322908(+) A-I      intronic chr10:96308636(+) A-I      intronic chr10:96326609(+) A-I      intronic chr10:96322039(+) A-I      intronic chr10:96328629(+) A-I      intronic chr10:96348797(+) A-I      intronic chr10:96325042(+) A-I      intronic chr10:96323087(+) A-I      intronic chr10:96323734(+) A-I      intronic chr10:96324895(+) A-I      intronic chr10:96322029(+) A-I      intronic chr10:96323598(+) A-I      intronic chr10:96339140(+) A-I      intronic chr10:96337497(+) A-I      intronic chr10:96310223(+) A-I      intronic chr10:96310392(+) A-I      intronic chr10:96327607(+) A-I      intronic chr10:96319405(+) A-I      intronic chr10:96327580(+) A-I      intronic chr10:96337916(+) A-I      intronic chr10:96318565(+) A-I      intronic chr10:96322919(+) A-I      intronic chr10:96339373(+) A-I      intronic chr10:96337507(+) A-I      intronic chr10:96327185(+) A-I      intronic chr10:96325375(+) A-I      intronic chr10:96325779(+) A-I      intronic chr10:96325271(+) A-I      intronic chr10:96339322(+) A-I      intronic chr10:96322953(+) A-I      intronic chr10:96314938(+) A-I      intronic chr10:96319258(+) A-I      intronic chr10:96327746(+) A-I      intronic chr10:96320386(+) A-I      intronic chr10:96324929(+) A-I      intronic chr10:96338199(+) A-I      intronic chr10:96320403(+) A-I      intronic chr10:96338312(+) A-I      intronic chr10:96328621(+) A-I      intronic chr10:96324574(+) A-I      intronic chr10:96315498(+) A-I      intronic chr10:96325299(+) A-I      intronic chr10:96326504(+) A-I      intronic chr10:96326551(+) A-I      intronic chr10:96319894(+) A-I      intronic chr10:96325688(+) A-I      intronic chr10:96325335(+) A-I      intronic chr10:96327401(+) A-I      intronic chr10:96325076(+) A-I      intronic chr10:96323062(+) A-I      intronic chr10:96325392(+) A-I      intronic chr10:96325913(+) A-I      intronic chr10:96315455(+) A-I      intronic chr10:96325287(+) A-I      intronic chr10:96337673(+) A-I      intronic chr10:96311176(+) A-I      intronic chr10:96311070(+) A-I      intronic chr10:96314961(+) A-I      intronic chr10:96323027(+) A-I      intronic chr10:96325192(+) A-I      intronic chr10:96337705(+) A-I      intronic chr10:96311772(+) A-I      intronic chr10:96324996(+) A-I      intronic chr10:96348784(+) A-I      intronic chr10:96327512(+) A-I      intronic chr10:96311681(+) A-I      intronic chr10:96319463(+) A-I      intronic chr10:96327558(+) A-I      intronic chr10:96327864(+) A-I      intronic chr10:96324987(+) A-I      intronic chr10:96322013(+) A-I      intronic chr10:96327814(+) A-I      intronic chr10:96348698(+) A-I      intronic chr10:96327850(+) A-I      intronic chr10:96349463(+) A-I      intronic chr10:96325213(+) A-I      intronic chr10:96337780(+) A-I      intronic chr10:96339465(+) A-I      intronic chr10:96310241(+) A-I      intronic chr10:96320373(+) A-I      intronic chr10:96348657(+) A-I      intronic chr10:96349467(+) A-I      intronic chr10:96323796(+) A-I      intronic chr10:96327189(+) A-I      intronic chr10:96322952(+) A-I      intronic chr10:96337749(+) A-I      intronic chr10:96325276(+) A-I      intronic chr10:96326632(+) A-I      intronic chr10:96325296(+) A-I      intronic chr10:96327416(+) A-I      intronic chr10:96326508(+) A-I      intronic chr10:96326507(+) A-I      intronic chr10:96323829(+) A-I      intronic chr10:96323789(+) A-I      intronic chr10:96359314(+) A-I      intronic chr10:96337425(+) A-I      intronic chr10:96323018(+) A-I      intronic chr10:96320686(+) A-I      intronic chr10:96326503(+) A-I      intronic chr10:96324838(+) A-I      intronic chr10:96320203(+) A-I      intronic chr10:96308624(+) A-I      intronic chr10:96326557(+) A-I      intronic chr10:96321729(+) A-I      intronic chr10:96323697(+) A-I      intronic chr10:96339428(+) A-I      intronic chr10:96348385(+) A-I      intronic chr10:96325047(+) A-I      intronic chr10:96337536(+) A-I      intronic chr10:96325285(+) A-I      intronic chr10:96338379(+) A-I      intronic chr10:96326674(+) A-I      intronic chr10:96325676(+) A-I      intronic chr10:96325294(+) A-I      intronic chr10:96323036(+) A-I      intronic chr10:96327156(+) A-I      intronic chr10:96325833(+) A-I      intronic chr10:96324932(+) A-I      intronic chr10:96310523(+) A-I      intronic chr10:96339368(+) A-I      intronic chr10:96325719(+) A-I      intronic chr10:96325367(+) A-I      intronic chr10:96323747(+) A-I      intronic chr10:96327413(+) A-I      intronic chr10:96314965(+) A-I      intronic chr10:96325238(+) A-I      intronic chr10:96327508(+) A-I      intronic chr10:96339038(+) A-I      intronic chr10:96325915(+) A-I      intronic chr10:96322040(+) A-I      intronic chr10:96339165(+) A-I      intronic chr10:96359324(+) A-I      intronic chr10:96339143(+) A-I      intronic chr10:96319272(+) A-I      intronic chr10:96323667(+) A-I      intronic chr10:96324973(+) A-I      intronic chr10:96339087(+) A-I      intronic chr10:96320194(+) A-I      intronic chr10:96315012(+) A-I      intronic chr10:96315489(+) A-I      intronic chr10:96325899(+) A-I      intronic chr10:96337851(+) A-I      intronic chr10:96320242(+) A-I      intronic chr10:96372562(+) A-I      3'UTR chr10:96372568(+) A-I      3'UTR chr10:96372518(+) A-I      3'UTR chr10:96323115(+) A-I      intronic chr10:96372483(+) A-I      3'UTR chr10:96370092(+) A-I      3'UTR chr10:96372487(+) A-I      3'UTR chr10:96372651(+) A-I      3'UTR chr10:96324532(+) A-I      intronic chr10:96372608(+) A-I      3'UTR chr10:96372523(+) A-I      3'UTR chr10:96322914(+) A-I      intronic chr10:96370475(+) A-I      3'UTR chr10:96312867(+) A-I      intronic chr10:96312928(+) A-I      intronic chr10:96370621(+) A-I      3'UTR chr10:96372529(+) A-I      3'UTR chr10:96372604(+) A-I      3'UTR chr10:96323050(+) A-I      intronic chr10:96324839(+) A-I      intronic chr10:96372556(+) A-I      3'UTR chr10:96372572(+) A-I      3'UTR chr10:96312961(+) A-I      intronic chr10:96372411(+) A-I      3'UTR chr10:96370640(+) A-I      3'UTR chr10:96372433(+) A-I      3'UTR chr10:96372598(+) A-I      3'UTR chr10:96370445(+) A-I      3'UTR chr10:96327611(+) A-I      intronic chr10:96340022(+) A-I      intronic chr10:96372667(+) A-I      3'UTR chr10:96322004(+) A-I      intronic chr10:96370530(+) A-I      3'UTR chr10:96372585(+) A-I      3'UTR chr10:96372528(+) A-I      3'UTR chr10:96370120(+) A-I      3'UTR chr10:96370162(+) A-I      3'UTR chr10:96325184(+) A-I      intronic chr10:96323801(+) A-I      intronic chr10:96338234(+) A-I      intronic chr10:96372499(+) A-I      3'UTR chr10:96372611(+) A-I      3'UTR chr10:96370561(+) A-I      3'UTR chr10:96372680(+) A-I      3'UTR chr10:96372631(+) A-I      3'UTR chr10:96308831(+) A-I      intronic chr10:96370093(+) A-I      3'UTR chr10:96370485(+) A-I      3'UTR chr10:96370449(+) A-I      3'UTR chr10:96370407(+) A-I      3'UTR chr10:96338328(+) A-I      intronic chr10:96372521(+) A-I      3'UTR chr10:96348373(+) A-I      intronic chr10:96372443(+) A-I      3'UTR chr10:96372622(+) A-I      3'UTR chr10:96372563(+) A-I      3'UTR chr10:96338977(+) A-I      intronic chr10:96370556(+) A-I      3'UTR chr10:96372455(+) A-I      3'UTR chr10:96372484(+) A-I      3'UTR chr10:96372530(+) A-I      3'UTR chr10:96324822(+) A-I      intronic chr10:96372497(+) A-I      3'UTR chr10:96372505(+) A-I      3'UTR chr10:96325286(+) A-I      intronic chr10:96370472(+) A-I      3'UTR chr10:96327479(+) A-I      intronic chr10:96372427(+) A-I      3'UTR chr10:96372507(+) A-I      3'UTR chr10:96372524(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HELLS	chr10:96327401(+) A-I intron -    22327324 chr10:96322914(+) A-G intron -    22484847 chr10:96323087(+) A-G intron -    22484847 chr10:96323116(+) A-G intron -    22484847 chr10:96323598(+) A-G intron -    22484847 chr10:96323747(+) A-G intron -    22484847 chr10:96324532(+) A-G intron -    22484847 chr10:96324535(+) A-G intron -    22484847 chr10:96324932(+) A-G intron -    22484847 chr10:96324947(+) A-G intron -    22484847 chr10:96324973(+) A-G intron -    22484847 chr10:96324987(+) A-G intron -    22484847 chr10:96325286(+) A-G intron -    22484847 chr10:96325287(+) A-G intron -    22484847 chr10:96325700(+) A-G intron -    22484847 chr10:96325711(+) A-G intron -    22484847 chr10:96325779(+) A-G intron -    22484847 chr10:96325913(+) A-G intron -    22484847 chr10:96327401(+) A-G intron -    22484847 chr10:96327461(+) A-G intron -    22484847 chr10:96327462(+) A-G intron -    22484847 chr10:96327558(+) A-G intron -    22484847 chr10:96337428(+) A-G intron -    22484847 chr10:96337429(+) A-G intron -    22484847 chr10:96337497(+) A-G intron -    22484847 chr10:96337910(+) A-G intron -    22484847 chr10:96338312(+) A-G intron -    22484847 chr10:96338357(+) A-G intron -    22484847 chr10:96339051(+) A-G intron -    22484847 chr10:96339140(+) A-G intron -    22484847 chr10:96339165(+) A-G intron -    22484847 chr10:96339360(+) A-G intron -    22484847 chr10:96339428(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HELLS	chr10:96282206-96282207(+) m6A intron       24981863//27773535//22608085 chr10:96291052-96291053(+) m6A intron       24284625//24209618//24981863//22608085 chr10:96291101-96291102(+) m6A intron       24284625//24209618//24981863//22608085 chr10:96291211-96291212(+) m6A intron       24284625//24209618//24981863//27773535//22608085 chr10:96292821-96292822(+) m6A intron       24284625//24981863//27773535//22608085 chr10:96292827-96292828(+) m6A intron       24284625//24981863//27773535//22608085 chr10:96292869-96292870(+) m6A intron       24981863//27773535//22608085 chr10:96292976-96292977(+) m6A intron       24981863//27773535//22608085 chr10:96293041-96293042(+) m6A intron       24981863//27773535//22608085 chr10:96305651-96305652(+) m6A 5'UTR//intron       22575960 chr10:96306158-96306159(+) m6A CDS//intron       22575960 chr10:96306166-96306167(+) m6A CDS//intron       22575960 chr10:96306206-96306207(+) m6A CDS//intron       22575960 chr10:96306232-96306233(+) Gm CDS//intron       - chr10:96313929-96313930(+) m6A CDS//exon//intron       27773535 chr10:96313989-96313990(+) m6A CDS//exon//intron       27773535 chr10:96316955-96316956(+) m6A intron       24981863//27773535 chr10:96317897-96317898(+) m6A CDS//exon//intron       24981863//27773535 chr10:96350270-96350271(+) m6A CDS       24981863 chr10:96350299-96350300(+) m6A CDS       24981863 chr10:96350530-96350531(+) Am CDS//exon       - chr10:96361303-96361304(+) m6A CDS//exon       - chr10:96372861-96372862(+) m6A 3'UTR       24981863 chr10:96372946-96372947(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-3116	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Colon cancer cell line (LIM1863)     -
	HELLS	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-3116
Interactor2: HELLS

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.