Detail Information

Basic Information:


  VIRBase ID:  

HHID00071161

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-320d:           RNF168:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-320d RNF168
miRBase
Accession/Entrez ID
MIMAT0006764 165918
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - hRNF168//RIDL

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-320d
rs1013069487 chr13:40727828    T/C
rs1212045422 chr13:40727836    ACC/A
rs1287962814 chr13:40727836    A/G
rs755131134 chr13:40727846    T/C
rs757049836 chr13:40727829    C/A
rs757049836 chr13:40727829    C/T
rs772990558 chr13:40727831    T/C
rs1441164440 chrX:140926173    C/G
rs1556096982 chrX:140926178    C/G
rs782742486 chrX:140926174    C/G
rs782742486 chrX:140926174    C/T
rs1371780032 chr13:40727825    TCATCCTCTCAACCCAGC/T
rs535778068 chr13:40727842    C/G
rs569951817 chr13:40727839    C/T
rs1330731340 chrX:140926183    C/G
rs1384057774 chrX:140926185    G/A
rs1422735584 chrX:140926184    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RNF168
chr3:196217999(-) A-I      intronic
chr3:196225253(-) A-I      intronic
chr3:196225244(-) A-I      intronic
chr3:196225242(-) A-I      intronic
chr3:196225195(-) A-I      intronic
chr3:196218303(-) A-I      intronic
chr3:196218317(-) A-I      intronic
chr3:196219152(-) A-I      intronic
chr3:196219153(-) A-I      intronic
chr3:196219158(-) A-I      intronic
chr3:196220503(-) A-I      intronic
chr3:196211458(-) A-I      intronic
chr3:196220521(-) A-I      intronic
chr3:196220618(-) A-I      intronic
chr3:196220758(-) A-I      intronic
chr3:196220952(-) A-I      intronic
chr3:196213880(-) A-I      intronic
chr3:196221861(-) A-I      intronic
chr3:196225192(-) A-I      intronic
chr3:196216274(-) A-I      intronic
chr3:196225114(-) A-I      intronic
chr3:196216270(-) A-I      intronic
chr3:196226568(-) A-I      intronic
chr3:196216265(-) A-I      intronic
chr3:196211079(-) A-I      intronic
chr3:196211154(-) A-I      intronic
chr3:196206453(-) A-I      intronic
chr3:196206422(-) A-I      intronic
chr3:196204823(-) A-I      intronic
chr3:196225134(-) A-I      intronic
chr3:196229275(-) A-I      intronic
chr3:196225245(-) A-I      intronic
chr3:196225718(-) A-I      intronic
chr3:196204807(-) A-I      intronic
chr3:196204806(-) A-I      intronic
chr3:196204698(-) A-I      intronic
chr3:196208630(-) A-I      intronic
chr3:196207629(-) A-I      intronic
chr3:196206423(-) A-I      intronic
chr3:196205857(-) A-I      intronic
chr3:196201498(-) A-I      intronic
chr3:196201493(-) A-I      intronic
chr3:196200678(-) A-I      intronic
chr3:196225822(-) A-I      intronic
chr3:196204910(-) A-I      intronic
chr3:196226570(-) A-I      intronic
chr3:196229412(-) A-I      intronic
chr3:196201537(-) A-I      intronic
chr3:196204893(-) A-I      intronic
chr3:196201203(-) A-I      intronic
chr3:196201201(-) A-I      intronic
chr3:196225258(-) A-I      intronic
chr3:196226573(-) A-I      intronic
chr3:196218454(-) A-I      intronic
chr3:196201156(-) A-I      intronic
chr3:196216354(-) A-I      intronic
chr3:196200676(-) A-I      intronic
chr3:196216322(-) A-I      intronic
chr3:196216317(-) A-I      intronic
chr3:196225126(-) A-I      intronic
chr3:196218004(-) A-I      intronic
chr3:196213364(-) A-I      intronic
chr3:196213287(-) A-I      intronic
chr3:196212359(-) A-I      intronic
chr3:196212319(-) A-I      intronic
chr3:196212313(-) A-I      intronic
chr3:196212278(-) A-I      intronic
chr3:196211688(-) A-I      intronic
chr3:196216307(-) A-I      intronic
chr3:196200671(-) A-I      intronic
chr3:196204887(-) A-I      intronic
chr3:196204836(-) A-I      intronic
chr3:196204825(-) A-I      intronic
chr3:196204759(-) A-I      intronic
chr3:196225683(-) A-I      intronic
chr3:196216366(-) A-I      intronic
chr3:196205675(-) A-I      intronic
chr3:196216375(-) A-I      intronic
chr3:196216415(-) A-I      intronic
chr3:196216465(-) A-I      intronic
chr3:196217951(-) A-I      intronic
chr3:196201551(-) A-I      intronic
chr3:196208199(-) A-I      intronic
chr3:196221914(-) A-I      intronic
chr3:196215799(-) A-I      intronic
chr3:196215999(-) A-I      intronic
chr3:196208911(-) A-I      intronic
chr3:196213768(-) A-I      intronic
chr3:196215920(-) A-I      intronic
chr3:196225206(-) A-I      intronic
chr3:196206749(-) A-I      intronic
chr3:196227680(-) A-I      intronic
chr3:196211455(-) A-I      intronic
chr3:196203383(-) A-I      intronic
chr3:196200626(-) A-I      intronic
chr3:196213864(-) A-I      intronic
chr3:196212296(-) A-I      intronic
chr3:196204903(-) A-I      intronic
chr3:196215096(-) A-I      intronic
chr3:196215864(-) A-I      intronic
chr3:196221811(-) A-I      intronic
chr3:196215991(-) A-I      intronic
chr3:196221868(-) A-I      intronic
chr3:196215834(-) A-I      intronic
chr3:196221793(-) A-I      intronic
chr3:196221772(-) A-I      intronic
chr3:196204737(-) A-I      intronic
chr3:196225862(-) A-I      intronic
chr3:196215954(-) A-I      intronic
chr3:196221782(-) A-I      intronic
chr3:196221714(-) A-I      intronic
chr3:196216000(-) A-I      intronic
chr3:196215890(-) A-I      intronic
chr3:196215902(-) A-I      intronic
chr3:196212216(-) A-I      intronic
chr3:196215761(-) A-I      intronic
chr3:196203003(-) A-I      intronic
chr3:196215931(-) A-I      intronic
chr3:196211246(-) A-I      intronic
chr3:196226592(-) A-I      intronic
chr3:196215921(-) A-I      intronic
chr3:196212291(-) A-I      intronic
chr3:196221860(-) A-I      intronic
chr3:196215838(-) A-I      intronic
chr3:196215893(-) A-I      intronic
chr3:196215863(-) A-I      intronic
chr3:196215828(-) A-I      intronic
chr3:196215752(-) A-I      intronic
chr3:196221706(-) A-I      intronic
chr3:196215978(-) A-I      intronic
chr3:196220535(-) A-I      intronic
chr3:196213746(-) A-I      intronic
chr3:196221689(-) A-I      intronic
chr3:196215819(-) A-I      intronic
chr3:196215780(-) A-I      intronic
chr3:196221799(-) A-I      intronic
chr3:196200674(-) A-I      intronic
chr3:196221770(-) A-I      intronic
chr3:196211428(-) A-I      intronic
chr3:196220508(-) A-I      intronic
chr3:196206278(-) A-I      intronic
chr3:196221676(-) A-I      intronic
chr3:196204738(-) A-I      intronic
chr3:196226548(-) A-I      intronic
chr3:196221794(-) A-I      intronic
chr3:196208707(-) A-I      intronic
chr3:196208810(-) A-I      intronic
chr3:196201501(-) A-I      intronic
chr3:196216377(-) A-I      intronic
chr3:196204793(-) A-I      intronic
chr3:196208200(-) A-I      intronic
chr3:196211512(-) A-I      intronic
chr3:196220862(-) A-I      intronic
chr3:196213282(-) A-I      intronic
chr3:196211181(-) A-I      intronic
chr3:196219586(-) A-I      intronic
chr3:196206418(-) A-I      intronic
chr3:196208225(-) A-I      intronic
chr3:196218175(-) A-I      intronic
chr3:196206351(-) A-I      intronic
chr3:196205979(-) A-I      intronic
chr3:196197919(-) A-I      3'UTR
chr3:196198004(-) A-I      3'UTR
chr3:196211217(-) A-I      intronic
chr3:196204827(-) A-I      intronic
chr3:196213882(-) A-I      intronic
chr3:196213293(-) A-I      intronic
chr3:196205684(-) A-I      intronic
chr3:196211802(-) A-I      intronic
chr3:196201273(-) A-I      intronic
chr3:196204855(-) A-I      intronic
chr3:196211240(-) A-I      intronic
chr3:196213405(-) A-I      intronic
chr3:196204725(-) A-I      intronic
chr3:196213747(-) A-I      intronic
chr3:196207766(-) A-I      intronic
chr3:196213358(-) A-I      intronic
chr3:196201137(-) A-I      intronic
chr3:196213418(-) A-I      intronic
chr3:196207571(-) A-I      intronic
chr3:196213912(-) A-I      intronic
chr3:196201565(-) A-I      intronic
chr3:196211437(-) A-I      intronic
chr3:196221888(-) A-I      intronic
chr3:196225045(-) A-I      intronic
chr3:196225738(-) A-I      intronic
chr3:196200560(-) A-I      intronic
chr3:196220902(-) A-I      intronic
chr3:196225832(-) A-I      intronic
chr3:196204736(-) A-I      intronic
chr3:196207611(-) A-I      intronic
chr3:196221876(-) A-I      intronic
chr3:196213784(-) A-I      intronic
chr3:196212256(-) A-I      intronic
chr3:196212338(-) A-I      intronic
chr3:196226489(-) A-I      intronic
chr3:196216394(-) A-I      intronic
chr3:196211794(-) A-I      intronic
chr3:196218434(-) A-I      intronic
chr3:196220342(-) A-I      intronic
chr3:196226488(-) A-I      intronic
chr3:196213398(-) A-I      intronic
chr3:196220595(-) A-I      intronic
chr3:196225744(-) A-I      intronic
chr3:196208702(-) A-I      intronic
chr3:196213296(-) A-I      intronic
chr3:196204704(-) A-I      intronic
chr3:196225754(-) A-I      intronic
chr3:196204928(-) A-I      intronic
chr3:196225783(-) A-I      intronic
chr3:196200469(-) A-I      intronic
chr3:196221892(-) A-I      intronic
chr3:196207761(-) A-I      intronic
chr3:196225219(-) A-I      intronic
chr3:196204872(-) A-I      intronic
chr3:196225201(-) A-I      intronic
chr3:196213460(-) A-I      intronic
chr3:196216006(-) A-I      intronic
chr3:196212346(-) A-I      intronic
chr3:196216440(-) A-I      intronic
chr3:196220534(-) A-I      intronic
chr3:196229292(-) A-I      intronic
chr3:196212295(-) A-I      intronic
chr3:196208245(-) A-I      intronic
chr3:196205636(-) A-I      intronic
chr3:196204942(-) A-I      intronic
chr3:196225121(-) A-I      intronic
chr3:196204794(-) A-I      intronic
chr3:196203775(-) A-I      intronic
chr3:196204811(-) A-I      intronic
chr3:196208720(-) A-I      intronic
chr3:196208910(-) A-I      intronic
chr3:196211167(-) A-I      intronic
chr3:196208950(-) A-I      intronic
chr3:196218137(-) A-I      intronic
chr3:196208924(-) A-I      intronic
chr3:196225261(-) A-I      intronic
chr3:196200523(-) A-I      intronic
chr3:196213404(-) A-I      intronic
chr3:196213923(-) A-I      intronic
chr3:196211726(-) A-I      intronic
chr3:196211641(-) A-I      intronic
chr3:196204860(-) A-I      intronic
chr3:196211753(-) A-I      intronic
chr3:196226529(-) A-I      intronic
chr3:196213772(-) A-I      intronic
chr3:196211491(-) A-I      intronic
chr3:196226526(-) A-I      intronic
chr3:196226543(-) A-I      intronic
chr3:196213823(-) A-I      intronic
chr3:196206451(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RNF168
chr3:196204736(-) A-I intron -    22327324
chr3:196204784(-) A-I intron -    22327324
chr3:196208277(-) A-I intron -    22327324
chr3:196215752(-) A-I intron -    22028664
chr3:196215761(-) A-I intron -    22028664
chr3:196215780(-) A-I intron -    22028664
chr3:196215799(-) A-I intron -    22028664
chr3:196215819(-) A-I intron -    22028664
chr3:196215828(-) A-I intron -    22028664
chr3:196215834(-) A-I intron -    22028664
chr3:196215838(-) A-I intron -    22028664
chr3:196215863(-) A-I intron -    22028664
chr3:196215864(-) A-I intron -    22028664
chr3:196215890(-) A-I intron -    22028664
chr3:196215893(-) A-I intron -    22028664
chr3:196215902(-) A-I intron -    22028664
chr3:196215920(-) A-I intron -    22028664
chr3:196215921(-) A-I intron -    22028664
chr3:196215931(-) A-I intron -    22028664
chr3:196215954(-) A-I intron -    22028664
chr3:196215978(-) A-I intron -    22028664
chr3:196215991(-) A-I intron -    22028664
chr3:196215999(-) A-I intron -    22028664
chr3:196216000(-) A-I intron -    22028664
chr3:196216006(-) A-I intron -    22028664
chr3:196221676(-) A-I intron -    22028664
chr3:196221689(-) A-I intron -    22028664
chr3:196221702(-) A-I intron -    22028664
chr3:196221706(-) A-I intron -    22028664
chr3:196221714(-) A-I intron -    22028664
chr3:196221737(-) A-I intron -    22028664
chr3:196221770(-) A-I intron -    22028664
chr3:196221772(-) A-I intron -    22028664
chr3:196221782(-) A-I intron -    22028664
chr3:196221793(-) A-I intron -    22028664
chr3:196221794(-) A-I intron -    22028664
chr3:196221799(-) A-I intron -    22028664
chr3:196221811(-) A-I intron -    22028664
chr3:196221860(-) A-I intron -    22028664
chr3:196221868(-) A-I intron -    22028664
chr3:196221888(-) A-I intron -    22028664
chr3:196221914(-) A-I intron -    22028664
chr3:196199849(-) A-G intron -    22484847
chr3:196200469(-) A-G intron -    22484847
chr3:196201551(-) A-G intron -    22484847
chr3:196201565(-) A-G intron -    22484847
chr3:196202881(-) G-A intron -    22484847
chr3:196202916(-) T-A intron -    22484847
chr3:196204725(-) A-G intron -    22484847
chr3:196204736(-) A-G intron -    22484847
chr3:196204738(-) A-G intron -    22484847
chr3:196204784(-) A-G intron -    22484847
chr3:196204793(-) A-G intron -    22484847
chr3:196204794(-) A-G intron -    22484847
chr3:196204811(-) A-G intron -    22484847
chr3:196204833(-) A-G intron -    22484847
chr3:196204843(-) A-G intron -    22484847
chr3:196204855(-) A-G intron -    22484847
chr3:196204860(-) A-G intron -    22484847
chr3:196204872(-) A-G intron -    22484847
chr3:196204873(-) A-G intron -    22484847
chr3:196204928(-) A-G intron -    22484847
chr3:196204942(-) A-G intron -    22484847
chr3:196205636(-) A-G intron -    22484847
chr3:196205684(-) A-G intron -    22484847
chr3:196206335(-) A-G intron -    22484847
chr3:196207611(-) A-G intron -    22484847
chr3:196207761(-) A-G intron -    22484847
chr3:196207791(-) A-G intron -    22484847
chr3:196208199(-) A-G intron -    22484847
chr3:196208200(-) A-G intron -    22484847
chr3:196208245(-) A-G intron -    22484847
chr3:196208277(-) A-G intron -    22484847
chr3:196208810(-) A-G intron -    22484847
chr3:196211181(-) A-G intron -    22484847
chr3:196211235(-) A-G intron -    22484847
chr3:196211240(-) A-G intron -    22484847
chr3:196211246(-) A-G intron -    22484847
chr3:196211437(-) A-G intron -    22484847
chr3:196211449(-) A-G intron -    22484847
chr3:196211455(-) A-G intron -    22484847
chr3:196211802(-) A-G intron -    22484847
chr3:196212291(-) A-G intron -    22484847
chr3:196212295(-) A-G intron -    22484847
chr3:196212338(-) A-G intron -    22484847
chr3:196212346(-) A-G intron -    22484847
chr3:196213404(-) A-G intron -    22484847
chr3:196213405(-) A-G intron -    22484847
chr3:196213460(-) A-G intron -    22484847
chr3:196213695(-) A-G intron -    22484847
chr3:196213747(-) A-G intron -    22484847
chr3:196213757(-) A-G intron -    22484847
chr3:196213768(-) A-G intron -    22484847
chr3:196213912(-) A-G intron -    22484847
chr3:196216006(-) A-G intron -    22484847
chr3:196216377(-) A-G intron -    22484847
chr3:196216394(-) A-G intron -    22484847
chr3:196216471(-) A-G intron -    22484847
chr3:196218021(-) A-G intron -    22484847
chr3:196218175(-) A-G intron -    22484847
chr3:196218434(-) A-G intron -    22484847
chr3:196220508(-) A-G intron -    22484847
chr3:196220534(-) A-G intron -    22484847
chr3:196220535(-) A-G intron -    22484847
chr3:196221766(-) A-G intron -    22484847
chr3:196221793(-) A-G intron -    22484847
chr3:196221888(-) A-G intron -    22484847
chr3:196221892(-) A-G intron -    22484847
chr3:196223776(-) T-C intron -    22484847
chr3:196225172(-) A-G intron -    22484847
chr3:196225207(-) A-G intron -    22484847
chr3:196225224(-) C-G intron -    22484847
chr3:196225259(-) A-G intron -    22484847
chr3:196225261(-) A-G intron -    22484847
chr3:196226489(-) A-G intron -    22484847
chr3:196226544(-) A-G intron -    22484847
chr3:196226548(-) A-G intron -    22484847
chr3:196226580(-) A-G intron -    22484847
chr3:196227680(-) A-G intron -    22484847
chr3:196227824(-) G-A intron -    22484847
chr3:196229376(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RNF168
chr3:196196843-196196844(-) m6A 3'UTR       27773535
chr3:196196852-196196853(-) m6A 3'UTR       27773535
chr3:196196919-196196920(-) m6A 3'UTR       27773535
chr3:196196994-196196995(-) m6A 3'UTR       27773535
chr3:196197200-196197201(-) m6A 3'UTR       24209618//27773535//27371828
chr3:196197219-196197220(-) m6A 3'UTR       24209618//27773535//27371828
chr3:196197269-196197270(-) m6A 3'UTR       24209618//27773535
chr3:196197288-196197289(-) m6A 3'UTR       24209618//27773535
chr3:196197367-196197368(-) m6A 3'UTR       27773535
chr3:196197452-196197453(-) m6A 3'UTR       27773535//22575960
chr3:196197533-196197534(-) m6A 3'UTR       27773535//22575960
chr3:196197583-196197584(-) m6A 3'UTR       24981863//27773535
chr3:196197602-196197603(-) m6A 3'UTR       24981863//27773535
chr3:196197669-196197670(-) m6A 3'UTR       27773535
chr3:196197674-196197675(-) m6A 3'UTR       27773535
chr3:196198383-196198384(-) m6A 3'UTR       -
chr3:196198536-196198537(-) m6A 3'UTR       24284625
chr3:196198545-196198546(-) m6A 3'UTR       24284625
chr3:196198858-196198859(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196198898-196198899(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196198912-196198913(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196198938-196198939(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196198954-196198955(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199011-196199012(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199068-196199069(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199073-196199074(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199082-196199083(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199088-196199089(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199121-196199122(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199134-196199135(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199144-196199145(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199236-196199237(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199291-196199292(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199305-196199306(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196199315-196199316(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196199354-196199355(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196199378-196199379(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196199402-196199403(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196199454-196199455(-) m6A 3'UTR//CDS       24284625//24981863//22575960//22608085
chr3:196199459-196199460(-) m6A 3'UTR//CDS       24284625//24981863//22575960//22608085
chr3:196199544-196199545(-) m6A 3'UTR//CDS       22608085
chr3:196199602-196199603(-) m6A 3'UTR//CDS       27773535//22608085
chr3:196202114-196202115(-) m6A 3'UTR//CDS       27773535//22608085
chr3:196210658-196210659(-) m6A 3'UTR//CDS       27773535
chr3:196210670-196210671(-) m6A 3'UTR//CDS       27773535
chr3:196214296-196214297(-) m6A 3'UTR//CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196214317-196214318(-) m6A 3'UTR//CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196214350-196214351(-) m6A 3'UTR//CDS       24284625//25456834//24981863//28052920//27773535//27371828//22608085
chr3:196214363-196214364(-) m1A 3'UTR//CDS       26863196
chr3:196214411-196214412(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr3:196214417-196214418(-) m1A CDS       26863196
chr3:196215510-196215511(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196215519-196215520(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196229798-196229799(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196229819-196229820(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196229860-196229861(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196229933-196229934(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr3:196230132-196230133(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196230139-196230140(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:196230261-196230262(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:196230303-196230304(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr3:196230384-196230385(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr3:196230531-196230532(-) m6A 5'UTR       24284625//24981863//27371828//27773536
chr3:196230556-196230557(-) m6A 5'UTR       24981863//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-320d
Exosome Pooled sera     27278097
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Plasma     23663360
Exosome Breast cancer cell lines (MCF-7|MDA-MB-231)     24468161
Exosome Colon cancer cell line (LIM1863)     25330373
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
RNF168
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-320d
Eloxatine 5310940 Drug interaction    RC00007888
5-Fluorouracil 3385 Drug interaction    RC00007885
Doxorubicin 31703 Drug interaction    RC00007886
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007884
Docetaxel 148124 Drug interaction    RC00007887
Marine fungal metabolite 1386A - Drug interaction    RC00007889
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-320d

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-320d
Interactor2: RNF168

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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