Detail Information

Basic Information:


  VIRBase ID:  

HHID00071155

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-320d:           MSI2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-320d MSI2
miRBase
Accession/Entrez ID
MIMAT0006764 124540
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - MSI2H

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-320d
rs1013069487 chr13:40727828    T/C
rs1212045422 chr13:40727836    ACC/A
rs1287962814 chr13:40727836    A/G
rs755131134 chr13:40727846    T/C
rs757049836 chr13:40727829    C/A
rs757049836 chr13:40727829    C/T
rs772990558 chr13:40727831    T/C
rs1441164440 chrX:140926173    C/G
rs1556096982 chrX:140926178    C/G
rs782742486 chrX:140926174    C/G
rs782742486 chrX:140926174    C/T
rs1371780032 chr13:40727825    TCATCCTCTCAACCCAGC/T
rs535778068 chr13:40727842    C/G
rs569951817 chr13:40727839    C/T
rs1330731340 chrX:140926183    C/G
rs1384057774 chrX:140926185    G/A
rs1422735584 chrX:140926184    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MSI2
chr17:55699439(+) A-I      intronic
chr17:55724719(+) A-I      intronic
chr17:55736667(+) A-I      intronic
chr17:55736659(+) A-I      intronic
chr17:55524516(+) A-I      intronic
chr17:55381566(+) A-I      intronic
chr17:55724695(+) A-I      intronic
chr17:55724667(+) A-I      intronic
chr17:55381568(+) A-I      intronic
chr17:55539116(+) A-I      intronic
chr17:55537176(+) A-I      intronic
chr17:55524504(+) A-I      intronic
chr17:55524492(+) A-I      intronic
chr17:55488445(+) A-I      intronic
chr17:55488409(+) A-I      intronic
chr17:55381569(+) A-I      intronic
chr17:55538966(+) A-I      intronic
chr17:55538996(+) A-I      intronic
chr17:55539092(+) A-I      intronic
chr17:55539095(+) A-I      intronic
chr17:55539141(+) A-I      intronic
chr17:55541655(+) A-I      intronic
chr17:55541662(+) A-I      intronic
chr17:55541674(+) A-I      intronic
chr17:55541682(+) A-I      intronic
chr17:55541684(+) A-I      intronic
chr17:55542559(+) A-I      intronic
chr17:55542582(+) A-I      intronic
chr17:55547718(+) A-I      intronic
chr17:55547739(+) A-I      intronic
chr17:55547764(+) A-I      intronic
chr17:55547805(+) A-I      intronic
chr17:55547849(+) A-I      intronic
chr17:55552141(+) A-I      intronic
chr17:55552144(+) A-I      intronic
chr17:55552149(+) A-I      intronic
chr17:55552279(+) A-I      intronic
chr17:55557426(+) A-I      intronic
chr17:55557433(+) A-I      intronic
chr17:55557434(+) A-I      intronic
chr17:55557462(+) A-I      intronic
chr17:55557466(+) A-I      intronic
chr17:55574408(+) A-I      intronic
chr17:55574439(+) A-I      intronic
chr17:55574560(+) A-I      intronic
chr17:55578199(+) A-I      intronic
chr17:55578209(+) A-I      intronic
chr17:55578213(+) A-I      intronic
chr17:55581169(+) A-I      intronic
chr17:55581170(+) A-I      intronic
chr17:55582161(+) A-I      intronic
chr17:55582189(+) A-I      intronic
chr17:55602772(+) A-I      intronic
chr17:55603333(+) A-I      intronic
chr17:55603359(+) A-I      intronic
chr17:55603466(+) A-I      intronic
chr17:55603497(+) A-I      intronic
chr17:55603507(+) A-I      intronic
chr17:55606615(+) A-I      intronic
chr17:55652261(+) A-I      intronic
chr17:55652272(+) A-I      intronic
chr17:55652291(+) A-I      intronic
chr17:55652309(+) A-I      intronic
chr17:55652341(+) A-I      intronic
chr17:55662231(+) A-I      intronic
chr17:55662234(+) A-I      intronic
chr17:55662263(+) A-I      intronic
chr17:55662401(+) A-I      intronic
chr17:55662466(+) A-I      intronic
chr17:55664100(+) A-I      intronic
chr17:55674791(+) A-I      intronic
chr17:55674912(+) A-I      intronic
chr17:55695338(+) A-I      intronic
chr17:55696005(+) A-I      intronic
chr17:55696022(+) A-I      intronic
chr17:55696034(+) A-I      intronic
chr17:55696044(+) A-I      intronic
chr17:55696070(+) A-I      intronic
chr17:55696102(+) A-I      intronic
chr17:55724534(+) A-I      intronic
chr17:55725110(+) A-I      intronic
chr17:55725148(+) A-I      intronic
chr17:55725186(+) A-I      intronic
chr17:55725192(+) A-I      intronic
chr17:55725237(+) A-I      intronic
chr17:55725255(+) A-I      intronic
chr17:55725283(+) A-I      intronic
chr17:55489452(+) A-I      intronic
chr17:55355409(+) A-I      intronic
chr17:55552345(+) A-I      intronic
chr17:55355373(+) A-I      intronic
chr17:55355374(+) A-I      intronic
chr17:55374255(+) A-I      intronic
chr17:55374416(+) A-I      intronic
chr17:55374433(+) A-I      intronic
chr17:55375902(+) A-I      intronic
chr17:55381470(+) A-I      intronic
chr17:55381508(+) A-I      intronic
chr17:55381559(+) A-I      intronic
chr17:55381560(+) A-I      intronic
chr17:55390263(+) A-I      intronic
chr17:55390307(+) A-I      intronic
chr17:55390308(+) A-I      intronic
chr17:55393707(+) A-I      intronic
chr17:55393825(+) A-I      intronic
chr17:55393827(+) A-I      intronic
chr17:55393909(+) A-I      intronic
chr17:55393939(+) A-I      intronic
chr17:55395280(+) A-I      intronic
chr17:55395311(+) A-I      intronic
chr17:55395314(+) A-I      intronic
chr17:55401392(+) A-I      intronic
chr17:55401443(+) A-I      intronic
chr17:55401460(+) A-I      intronic
chr17:55406367(+) A-I      intronic
chr17:55406375(+) A-I      intronic
chr17:55406396(+) A-I      intronic
chr17:55409493(+) A-I      intronic
chr17:55409501(+) A-I      intronic
chr17:55409591(+) A-I      intronic
chr17:55410183(+) A-I      intronic
chr17:55410199(+) A-I      intronic
chr17:55410225(+) A-I      intronic
chr17:55410233(+) A-I      intronic
chr17:55410236(+) A-I      intronic
chr17:55410239(+) A-I      intronic
chr17:55410341(+) A-I      intronic
chr17:55410879(+) A-I      intronic
chr17:55410903(+) A-I      intronic
chr17:55411917(+) A-I      intronic
chr17:55411969(+) A-I      intronic
chr17:55411978(+) A-I      intronic
chr17:55415554(+) A-I      intronic
chr17:55415589(+) A-I      intronic
chr17:55415591(+) A-I      intronic
chr17:55433282(+) A-I      intronic
chr17:55438693(+) A-I      intronic
chr17:55438847(+) A-I      intronic
chr17:55438861(+) A-I      intronic
chr17:55438877(+) A-I      intronic
chr17:55443387(+) A-I      intronic
chr17:55443393(+) A-I      intronic
chr17:55445739(+) A-I      intronic
chr17:55445740(+) A-I      intronic
chr17:55445757(+) A-I      intronic
chr17:55445796(+) A-I      intronic
chr17:55445797(+) A-I      intronic
chr17:55445841(+) A-I      intronic
chr17:55445848(+) A-I      intronic
chr17:55455249(+) A-I      intronic
chr17:55455259(+) A-I      intronic
chr17:55455273(+) A-I      intronic
chr17:55455289(+) A-I      intronic
chr17:55455293(+) A-I      intronic
chr17:55455315(+) A-I      intronic
chr17:55455382(+) A-I      intronic
chr17:55455688(+) A-I      intronic
chr17:55455754(+) A-I      intronic
chr17:55455764(+) A-I      intronic
chr17:55455772(+) A-I      intronic
chr17:55455782(+) A-I      intronic
chr17:55455786(+) A-I      intronic
chr17:55455816(+) A-I      intronic
chr17:55467343(+) A-I      intronic
chr17:55487207(+) A-I      intronic
chr17:55487223(+) A-I      intronic
chr17:55487249(+) A-I      intronic
chr17:55487258(+) A-I      intronic
chr17:55487281(+) A-I      intronic
chr17:55487294(+) A-I      intronic
chr17:55487319(+) A-I      intronic
chr17:55488427(+) A-I      intronic
chr17:55488430(+) A-I      intronic
chr17:55488532(+) A-I      intronic
chr17:55488565(+) A-I      intronic
chr17:55489108(+) A-I      intronic
chr17:55489184(+) A-I      intronic
chr17:55489257(+) A-I      intronic
chr17:55489317(+) A-I      intronic
chr17:55489318(+) A-I      intronic
chr17:55489325(+) A-I      intronic
chr17:55489502(+) A-I      intronic
chr17:55498995(+) A-I      intronic
chr17:55499120(+) A-I      intronic
chr17:55499121(+) A-I      intronic
chr17:55504480(+) A-I      intronic
chr17:55504684(+) A-I      intronic
chr17:55505604(+) A-I      intronic
chr17:55505688(+) A-I      intronic
chr17:55505696(+) A-I      intronic
chr17:55511590(+) A-I      intronic
chr17:55511600(+) A-I      intronic
chr17:55511606(+) A-I      intronic
chr17:55511658(+) A-I      intronic
chr17:55511695(+) A-I      intronic
chr17:55511729(+) A-I      intronic
chr17:55511735(+) A-I      intronic
chr17:55511737(+) A-I      intronic
chr17:55511741(+) A-I      intronic
chr17:55516294(+) A-I      intronic
chr17:55524508(+) A-I      intronic
chr17:55524518(+) A-I      intronic
chr17:55524528(+) A-I      intronic
chr17:55524699(+) A-I      intronic
chr17:55524729(+) A-I      intronic
chr17:55527861(+) A-I      intronic
chr17:55527952(+) A-I      intronic
chr17:55527964(+) A-I      intronic
chr17:55527966(+) A-I      intronic
chr17:55527981(+) A-I      intronic
chr17:55527982(+) A-I      intronic
chr17:55530428(+) A-I      intronic
chr17:55530444(+) A-I      intronic
chr17:55530445(+) A-I      intronic
chr17:55531859(+) A-I      intronic
chr17:55531915(+) A-I      intronic
chr17:55531923(+) A-I      intronic
chr17:55531979(+) A-I      intronic
chr17:55531995(+) A-I      intronic
chr17:55533836(+) A-I      intronic
chr17:55533863(+) A-I      intronic
chr17:55533868(+) A-I      intronic
chr17:55533888(+) A-I      intronic
chr17:55535149(+) A-I      intronic
chr17:55535245(+) A-I      intronic
chr17:55535561(+) A-I      intronic
chr17:55535601(+) A-I      intronic
chr17:55535660(+) A-I      intronic
chr17:55535668(+) A-I      intronic
chr17:55535735(+) A-I      intronic
chr17:55537091(+) A-I      intronic
chr17:55537153(+) A-I      intronic
chr17:55537294(+) A-I      intronic
chr17:55537337(+) A-I      intronic
chr17:55537410(+) A-I      intronic
chr17:55537445(+) A-I      intronic
chr17:55537469(+) A-I      intronic
chr17:55537564(+) A-I      intronic
chr17:55537626(+) A-I      intronic
chr17:55381567(+) A-I      intronic
chr17:55724565(+) A-I      intronic
chr17:55489442(+) A-I      intronic
chr17:55408300(+) A-I      intronic
chr17:55582185(+) A-I      intronic
chr17:55582130(+) A-I      intronic
chr17:55711706(+) A-I      intronic
chr17:55355479(+) A-I      intronic
chr17:55539085(+) A-I      intronic
chr17:55455656(+) A-I      intronic
chr17:55695177(+) A-I      intronic
chr17:55355398(+) A-I      intronic
chr17:55535172(+) A-I      intronic
chr17:55487222(+) A-I      intronic
chr17:55455808(+) A-I      intronic
chr17:55724556(+) A-I      intronic
chr17:55524519(+) A-I      intronic
chr17:55381884(+) A-I      intronic
chr17:55674750(+) A-I      intronic
chr17:55504679(+) A-I      intronic
chr17:55455585(+) A-I      intronic
chr17:55357105(+) A-I      intronic
chr17:55487290(+) A-I      intronic
chr17:55409562(+) A-I      intronic
chr17:55530418(+) A-I      intronic
chr17:55695084(+) A-I      intronic
chr17:55355438(+) A-I      intronic
chr17:55489192(+) A-I      intronic
chr17:55487114(+) A-I      intronic
chr17:55489528(+) A-I      intronic
chr17:55537600(+) A-I      intronic
chr17:55489604(+) A-I      intronic
chr17:55504680(+) A-I      intronic
chr17:55489115(+) A-I      intronic
chr17:55487182(+) A-I      intronic
chr17:55537173(+) A-I      intronic
chr17:55711747(+) A-I      intronic
chr17:55488588(+) A-I      intronic
chr17:55527272(+) A-I      intronic
chr17:55489221(+) A-I      intronic
chr17:55411003(+) A-I      intronic
chr17:55687559(+) A-I      intronic
chr17:55537330(+) A-I      intronic
chr17:55489280(+) A-I      intronic
chr17:55410830(+) A-I      intronic
chr17:55423030(+) A-I      intronic
chr17:55489247(+) A-I      intronic
chr17:55602801(+) A-I      intronic
chr17:55725105(+) A-I      intronic
chr17:55602739(+) A-I      intronic
chr17:55695815(+) A-I      intronic
chr17:55424113(+) A-I      intronic
chr17:55357030(+) A-I      intronic
chr17:55582106(+) A-I      intronic
chr17:55527111(+) A-I      intronic
chr17:55409603(+) A-I      intronic
chr17:55488620(+) A-I      intronic
chr17:55381863(+) A-I      intronic
chr17:55505684(+) A-I      intronic
chr17:55395399(+) A-I      intronic
chr17:55404550(+) A-I      intronic
chr17:55381553(+) A-I      intronic
chr17:55489261(+) A-I      intronic
chr17:55412040(+) A-I      intronic
chr17:55499119(+) A-I      intronic
chr17:55695113(+) A-I      intronic
chr17:55695892(+) A-I      intronic
chr17:55524700(+) A-I      intronic
chr17:55725466(+) A-I      intronic
chr17:55695833(+) A-I      intronic
chr17:55578124(+) A-I      intronic
chr17:55524523(+) A-I      intronic
chr17:55410176(+) A-I      intronic
chr17:55357139(+) A-I      intronic
chr17:55487192(+) A-I      intronic
chr17:55695794(+) A-I      intronic
chr17:55724613(+) A-I      intronic
chr17:55489447(+) A-I      intronic
chr17:55381949(+) A-I      intronic
chr17:55455805(+) A-I      intronic
chr17:55725106(+) A-I      intronic
chr17:55505683(+) A-I      intronic
chr17:55695267(+) A-I      intronic
chr17:55687719(+) A-I      intronic
chr17:55489468(+) A-I      intronic
chr17:55456010(+) A-I      intronic
chr17:55736460(+) A-I      intronic
chr17:55381624(+) A-I      intronic
chr17:55674970(+) A-I      intronic
chr17:55489323(+) A-I      intronic
chr17:55496841(+) A-I      intronic
chr17:55545693(+) A-I      intronic
chr17:55488551(+) A-I      intronic
chr17:55410265(+) A-I      intronic
chr17:55452084(+) A-I      intronic
chr17:55489215(+) A-I      intronic
chr17:55603527(+) A-I      intronic
chr17:55467361(+) A-I      intronic
chr17:55602723(+) A-I      intronic
chr17:55424107(+) A-I      intronic
chr17:55488548(+) A-I      intronic
chr17:55537582(+) A-I      intronic
chr17:55603465(+) A-I      intronic
chr17:55381958(+) A-I      intronic
chr17:55488483(+) A-I      intronic
chr17:55488465(+) A-I      intronic
chr17:55547819(+) A-I      intronic
chr17:55699413(+) A-I      intronic
chr17:55541720(+) A-I      intronic
chr17:55489524(+) A-I      intronic
chr17:55695329(+) A-I      intronic
chr17:55545803(+) A-I      intronic
chr17:55530582(+) A-I      intronic
chr17:55537145(+) A-I      intronic
chr17:55602839(+) A-I      intronic
chr17:55410209(+) A-I      intronic
chr17:55674734(+) A-I      intronic
chr17:55602785(+) A-I      intronic
chr17:55602720(+) A-I      intronic
chr17:55505701(+) A-I      intronic
chr17:55725599(+) A-I      intronic
chr17:55527266(+) A-I      intronic
chr17:55395376(+) A-I      intronic
chr17:55626504(+) A-I      intronic
chr17:55410275(+) A-I      intronic
chr17:55381967(+) A-I      intronic
chr17:55488478(+) A-I      intronic
chr17:55537196(+) A-I      intronic
chr17:55455490(+) A-I      intronic
chr17:55695065(+) A-I      intronic
chr17:55547778(+) A-I      intronic
chr17:55488424(+) A-I      intronic
chr17:55679843(+) A-I      intronic
chr17:55527971(+) A-I      intronic
chr17:55602775(+) A-I      intronic
chr17:55409667(+) A-I      intronic
chr17:55668899(+) A-I      intronic
chr17:55582020(+) A-I      intronic
chr17:55410898(+) A-I      intronic
chr17:55524739(+) A-I      intronic
chr17:55696155(+) A-I      intronic
chr17:55489525(+) A-I      intronic
chr17:55542603(+) A-I      intronic
chr17:55535591(+) A-I      intronic
chr17:55456026(+) A-I      intronic
chr17:55355318(+) A-I      intronic
chr17:55581289(+) A-I      intronic
chr17:55537325(+) A-I      intronic
chr17:55455897(+) A-I      intronic
chr17:55603571(+) A-I      intronic
chr17:55724516(+) A-I      intronic
chr17:55527134(+) A-I      intronic
chr17:55537343(+) A-I      intronic
chr17:55724679(+) A-I      intronic
chr17:55487248(+) A-I      intronic
chr17:55491868(+) A-I      intronic
chr17:55725398(+) A-I      intronic
chr17:55695203(+) A-I      intronic
chr17:55724637(+) A-I      intronic
chr17:55443453(+) A-I      intronic
chr17:55487329(+) A-I      intronic
chr17:55724632(+) A-I      intronic
chr17:55499700(+) A-I      intronic
chr17:55537369(+) A-I      intronic
chr17:55547708(+) A-I      intronic
chr17:55487275(+) A-I      intronic
chr17:55395363(+) A-I      intronic
chr17:55537100(+) A-I      intronic
chr17:55498986(+) A-I      intronic
chr17:55537574(+) A-I      intronic
chr17:55524581(+) A-I      intronic
chr17:55489218(+) A-I      intronic
chr17:55542565(+) A-I      intronic
chr17:55491814(+) A-I      intronic
chr17:55394951(+) A-I      intronic
chr17:55455885(+) A-I      intronic
chr17:55524472(+) A-I      intronic
chr17:55725600(+) A-I      intronic
chr17:55696088(+) A-I      intronic
chr17:55530501(+) A-I      intronic
chr17:55423029(+) A-I      intronic
chr17:55489114(+) A-I      intronic
chr17:55557348(+) A-I      intronic
chr17:55488499(+) A-I      intronic
chr17:55455963(+) A-I      intronic
chr17:55412035(+) A-I      intronic
chr17:55724589(+) A-I      intronic
chr17:55547813(+) A-I      intronic
chr17:55724549(+) A-I      intronic
chr17:55527778(+) A-I      intronic
chr17:55724535(+) A-I      intronic
chr17:55357190(+) A-I      intronic
chr17:55488477(+) A-I      intronic
chr17:55381973(+) A-I      intronic
chr17:55410194(+) A-I      intronic
chr17:55393803(+) A-I      intronic
chr17:55511565(+) A-I      intronic
chr17:55401431(+) A-I      intronic
chr17:55489651(+) A-I      intronic
chr17:55524548(+) A-I      intronic
chr17:55716069(+) A-I      intronic
chr17:55489673(+) A-I      intronic
chr17:55394989(+) A-I      intronic
chr17:55404532(+) A-I      intronic
chr17:55395395(+) A-I      intronic
chr17:55454301(+) A-I      intronic
chr17:55570064(+) A-I      intronic
chr17:55488382(+) A-I      intronic
chr17:55527911(+) A-I      intronic
chr17:55487115(+) A-I      intronic
chr17:55687728(+) A-I      intronic
chr17:55545695(+) A-I      intronic
chr17:55539104(+) A-I      intronic
chr17:55381607(+) A-I      intronic
chr17:55395263(+) A-I      intronic
chr17:55547822(+) A-I      intronic
chr17:55725554(+) A-I      intronic
chr17:55433374(+) A-I      intronic
chr17:55674759(+) A-I      intronic
chr17:55355484(+) A-I      intronic
chr17:55412005(+) A-I      intronic
chr17:55652318(+) A-I      intronic
chr17:55393789(+) A-I      intronic
chr17:55538997(+) A-I      intronic
chr17:55527987(+) A-I      intronic
chr17:55724588(+) A-I      intronic
chr17:55724528(+) A-I      intronic
chr17:55598119(+) A-I      intronic
chr17:55695032(+) A-I      intronic
chr17:55695117(+) A-I      intronic
chr17:55406374(+) A-I      intronic
chr17:55410271(+) A-I      intronic
chr17:55602901(+) A-I      intronic
chr17:55722903(+) A-I      intronic
chr17:55527937(+) A-I      intronic
chr17:55355394(+) A-I      intronic
chr17:55489564(+) A-I      intronic
chr17:55570087(+) A-I      intronic
chr17:55541644(+) A-I      intronic
chr17:55433303(+) A-I      intronic
chr17:55467496(+) A-I      intronic
chr17:55725080(+) A-I      intronic
chr17:55505601(+) A-I      intronic
chr17:55706812(+) A-I      intronic
chr17:55741768(+) A-I      intronic
chr17:55455689(+) A-I      intronic
chr17:55537113(+) A-I      intronic
chr17:55578176(+) A-I      intronic
chr17:55537619(+) A-I      intronic
chr17:55357032(+) A-I      intronic
chr17:55545626(+) A-I      intronic
chr17:55692769(+) A-I      intronic
chr17:55488542(+) A-I      intronic
chr17:55533837(+) A-I      intronic
chr17:55395389(+) A-I      intronic
chr17:55535173(+) A-I      intronic
chr17:55534987(+) A-I      intronic
chr17:55381464(+) A-I      intronic
chr17:55443375(+) A-I      intronic
chr17:55527133(+) A-I      intronic
chr17:55695062(+) A-I      intronic
chr17:55547824(+) A-I      intronic
chr17:55409561(+) A-I      intronic
chr17:55537190(+) A-I      intronic
chr17:55725604(+) A-I      intronic
chr17:55381557(+) A-I      intronic
chr17:55534978(+) A-I      intronic
chr17:55488435(+) A-I      intronic
chr17:55725109(+) A-I      intronic
chr17:55491890(+) A-I      intronic
chr17:55387795(+) A-I      intronic
chr17:55530491(+) A-I      intronic
chr17:55489493(+) A-I      intronic
chr17:55381456(+) A-I      intronic
chr17:55505711(+) A-I      intronic
chr17:55741695(+) A-I      intronic
chr17:55410132(+) A-I      intronic
chr17:55511578(+) A-I      intronic
chr17:55394930(+) A-I      intronic
chr17:55695068(+) A-I      intronic
chr17:55395390(+) A-I      intronic
chr17:55355417(+) A-I      intronic
chr17:55598115(+) A-I      intronic
chr17:55355452(+) A-I      intronic
chr17:55725135(+) A-I      intronic
chr17:55724631(+) A-I      intronic
chr17:55539115(+) A-I      intronic
chr17:55505609(+) A-I      intronic
chr17:55542585(+) A-I      intronic
chr17:55582154(+) A-I      intronic
chr17:55722871(+) A-I      intronic
chr17:55410899(+) A-I      intronic
chr17:55504665(+) A-I      intronic
chr17:55401593(+) A-I      intronic
chr17:55401835(+) A-I      intronic
chr17:55460468(+) A-I      intronic
chr17:55665239(+) A-I      intronic
chr17:55658004(+) A-I      intronic
chr17:55525234(+) A-I      intronic
chr17:55401596(+) A-I      intronic
chr17:55690491(+) A-I      intronic
chr17:55716737(+) A-I      intronic
chr17:55400950(+) A-I      intronic
chr17:55687558(+) A-I      intronic
chr17:55534457(+) A-I      intronic
chr17:55721052(+) A-I      intronic
chr17:55724755(+) A-I      intronic
chr17:55695116(+) A-I      intronic
chr17:55401845(+) A-I      intronic
chr17:55695276(+) A-I      intronic
chr17:55534425(+) A-I      intronic
chr17:55720989(+) A-I      intronic
chr17:55718379(+) A-I      intronic
chr17:55496969(+) A-I      intronic
chr17:55534893(+) A-I      intronic
chr17:55722496(+) A-I      intronic
chr17:55534890(+) A-I      intronic
chr17:55695492(+) A-I      intronic
chr17:55722261(+) A-I      intronic
chr17:55407820(+) A-I      intronic
chr17:55487206(+) A-I      intronic
chr17:55395271(+) A-I      intronic
chr17:55662318(+) A-I      intronic
chr17:55387812(+) A-I      intronic
chr17:55505723(+) A-I      intronic
chr17:55537439(+) A-I      intronic
chr17:55354475(+) A-I      intronic
chr17:55411065(+) A-I      intronic
chr17:55355412(+) A-I      intronic
chr17:55410992(+) A-I      intronic
chr17:55724594(+) A-I      intronic
chr17:55581255(+) A-I      intronic
chr17:55381913(+) A-I      intronic
chr17:55489599(+) A-I      intronic
chr17:55695816(+) A-I      intronic
chr17:55527953(+) A-I      intronic
chr17:55725225(+) A-I      intronic
chr17:55581267(+) A-I      intronic
chr17:55489248(+) A-I      intronic
chr17:55499163(+) A-I      intronic
chr17:55695842(+) A-I      intronic
chr17:55539129(+) A-I      intronic
chr17:55724699(+) A-I      intronic
chr17:55538976(+) A-I      intronic
chr17:55582127(+) A-I      intronic
chr17:55581285(+) A-I      intronic
chr17:55505616(+) A-I      intronic
chr17:55404520(+) A-I      intronic
chr17:55407849(+) A-I      intronic
chr17:55411990(+) A-I      intronic
chr17:55410913(+) A-I      intronic
chr17:55410938(+) A-I      intronic
chr17:55725158(+) A-I      intronic
chr17:55412008(+) A-I      intronic
chr17:55695335(+) A-I      intronic
chr17:55724557(+) A-I      intronic
chr17:55489190(+) A-I      intronic
chr17:55541625(+) A-I      intronic
chr17:55725132(+) A-I      intronic
chr17:55541793(+) A-I      intronic
chr17:55504779(+) A-I      intronic
chr17:55410940(+) A-I      intronic
chr17:55466465(+) A-I      intronic
chr17:55411012(+) A-I      intronic
chr17:55530630(+) A-I      intronic
chr17:55725639(+) A-I      intronic
chr17:55376029(+) A-I      intronic
chr17:55539159(+) A-I      intronic
chr17:55535163(+) A-I      intronic
chr17:55725131(+) A-I      intronic
chr17:55725627(+) A-I      intronic
chr17:55537370(+) A-I      intronic
chr17:55395001(+) A-I      intronic
chr17:55410835(+) A-I      intronic
chr17:55687536(+) A-I      intronic
chr17:55410862(+) A-I      intronic
chr17:55535195(+) A-I      intronic
chr17:55538977(+) A-I      intronic
chr17:55724754(+) A-I      intronic
chr17:55535001(+) A-I      intronic
chr17:55725271(+) A-I      intronic
chr17:55489182(+) A-I      intronic
chr17:55381558(+) A-I      intronic
chr17:55410124(+) A-I      intronic
chr17:55381465(+) A-I      intronic
chr17:55504639(+) A-I      intronic
chr17:55537328(+) A-I      intronic
chr17:55539036(+) A-I      intronic
chr17:55424203(+) A-I      intronic
chr17:55455159(+) A-I      intronic
chr17:55355399(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MSI2
chr17:55355318(+) A-I intron -    15342557
chr17:55355479(+) A-I intron -    15342557
chr17:55355484(+) A-I intron -    15342557
chr17:55357030(+) A-I intron -    15342557
chr17:55357105(+) A-I intron -    15342557
chr17:55357139(+) A-I intron -    15342557
chr17:55357190(+) A-I intron -    15342557
chr17:55716737(+) A-I intron -    15342557
chr17:55718379(+) A-I intron -    15342557
chr17:55720989(+) A-I intron -    15342557
chr17:55721052(+) A-I intron -    15342557
chr17:55722261(+) A-I intron -    15342557
chr17:55722496(+) A-I intron -    15342557
chr17:55723246(+) A-I intron -    15342557
chr17:55724516(+) A-I intron -    15342557
chr17:55724528(+) A-I intron -    15342557
chr17:55724535(+) A-I intron -    15342557
chr17:55724549(+) A-I intron -    15342557
chr17:55724556(+) A-I intron -    15342557
chr17:55724557(+) A-I intron -    15342557
chr17:55724565(+) A-I intron -    15342557
chr17:55724580(+) A-I intron -    15342557
chr17:55724588(+) A-I intron -    15342557
chr17:55724589(+) A-I intron -    15342557
chr17:55724594(+) A-I intron -    15342557
chr17:55724613(+) A-I intron -    15342557
chr17:55724631(+) A-I intron -    15342557
chr17:55724632(+) A-I intron -    15342557
chr17:55394930(+) A-I intron -    22327324
chr17:55488478(+) A-I intron -    22327324
chr17:55534978(+) A-I intron -    22327324
chr17:55695065(+) A-I intron -    22327324
chr17:55534425(+) A-I intron -    21960545
chr17:55534426(+) A-I intron -    21960545
chr17:55534890(+) A-G intron -    22484847
chr17:55355484(+) A-G intron -    22484847
chr17:55387795(+) A-G intron -    22484847
chr17:55387812(+) A-G intron -    22484847
chr17:55393803(+) A-G intron -    22484847
chr17:55394930(+) A-G intron -    22484847
chr17:55394989(+) A-G intron -    22484847
chr17:55409667(+) A-G intron -    22484847
chr17:55410271(+) A-G intron -    22484847
chr17:55487192(+) A-G intron -    22484847
chr17:55487222(+) A-G intron -    22484847
chr17:55487275(+) A-G intron -    22484847
chr17:55488478(+) A-G intron -    22484847
chr17:55489114(+) A-G intron -    22484847
chr17:55527911(+) A-G intron -    22484847
chr17:55527987(+) A-G intron -    22484847
chr17:55530501(+) A-G intron -    22484847
chr17:55534978(+) A-G intron -    22484847
chr17:55537145(+) A-G intron -    22484847
chr17:55602901(+) A-G intron -    22484847
chr17:55695065(+) A-G intron -    22484847
chr17:55695113(+) A-G intron -    22484847
chr17:55724679(+) A-G intron -    22484847
chr17:55725106(+) A-G intron -    22484847
chr17:55725135(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MSI2
chr17:55334476-55334477(+) m6A CDS//exon       24209618
chr17:55334489-55334490(+) m6A CDS//exon       24209618
chr17:55334838-55334839(+) m6A CDS//exon       24209618
chr17:55335656-55335657(+) m6A CDS//exon       -
chr17:55531501-55531502(+) Cm intron       -
chr17:55535967-55535968(+) Tm intron       -
chr17:55706215-55706216(+) m6A exon//intron       -
chr17:55706247-55706248(+) m6A exon//intron       -
chr17:55706291-55706292(+) m6A exon//intron       -
chr17:55706313-55706314(+) m6A exon//intron       -
chr17:55709473-55709474(+) m6A 3'UTR//exon//intron       24981863
chr17:55709484-55709485(+) m6A 3'UTR//exon//intron       24981863
chr17:55709521-55709522(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085
chr17:55709549-55709550(+) m6A 3'UTR//exon//intron       24284625//24981863//22575960//22608085
chr17:55709564-55709565(+) m6A 3'UTR//exon//intron       24284625//24981863//22575960//22608085
chr17:55709648-55709649(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085
chr17:55709664-55709665(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085
chr17:55709674-55709675(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085
chr17:55709701-55709702(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085
chr17:55709728-55709729(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085
chr17:55709805-55709806(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085
chr17:55756980-55756981(+) m6A 3'UTR       24284625
chr17:55756986-55756987(+) m6A 3'UTR       24284625
chr17:55757416-55757417(+) Cm 3'UTR       -
chr17:55758864-55758865(+) m6A 3'UTR       24981863
chr17:55758874-55758875(+) m6A 3'UTR       24981863
chr17:55758884-55758885(+) m6A 3'UTR       24981863
chr17:55758910-55758911(+) m6A 3'UTR       24981863
chr17:55758917-55758918(+) m6A 3'UTR       24981863
chr17:55759657-55759658(+) m6A 3'UTR       -
chr17:55760999-55761000(+) m6A 3'UTR       25456834//24981863
chr17:55761095-55761096(+) m6A 3'UTR       25456834//24981863
chr17:55761114-55761115(+) m6A 3'UTR       25456834//24981863
chr17:55761144-55761145(+) m6A 3'UTR       -
chr17:55761183-55761184(+) m6A 3'UTR       -
chr17:55761220-55761221(+) m6A 3'UTR       -
chr17:55761368-55761369(+) m6A 3'UTR       24981863
chr17:55761395-55761396(+) m6A 3'UTR       24981863
chr17:55761433-55761434(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-320d
Exosome Pooled sera     27278097
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Plasma     23663360
Exosome Breast cancer cell lines (MCF-7|MDA-MB-231)     24468161
Exosome Colon cancer cell line (LIM1863)     25330373
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
MSI2
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-320d
Eloxatine 5310940 Drug interaction    RC00007888
5-Fluorouracil 3385 Drug interaction    RC00007885
Doxorubicin 31703 Drug interaction    RC00007886
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007884
Docetaxel 148124 Drug interaction    RC00007887
Marine fungal metabolite 1386A - Drug interaction    RC00007889
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-320d

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-320d
Interactor2: MSI2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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