Detail Information

Basic Information:


  VIRBase ID:  

HHID00071139

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-320d:           ASXL2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-320d ASXL2
miRBase
Accession/Entrez ID
MIMAT0006764 55252
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ASXH2//SHAPNS

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-320d
rs1013069487 chr13:40727828    T/C
rs1212045422 chr13:40727836    ACC/A
rs1287962814 chr13:40727836    A/G
rs755131134 chr13:40727846    T/C
rs757049836 chr13:40727829    C/A
rs757049836 chr13:40727829    C/T
rs772990558 chr13:40727831    T/C
rs1441164440 chrX:140926173    C/G
rs1556096982 chrX:140926178    C/G
rs782742486 chrX:140926174    C/G
rs782742486 chrX:140926174    C/T
rs1371780032 chr13:40727825    TCATCCTCTCAACCCAGC/T
rs535778068 chr13:40727842    C/G
rs569951817 chr13:40727839    C/T
rs1330731340 chrX:140926183    C/G
rs1384057774 chrX:140926185    G/A
rs1422735584 chrX:140926184    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ASXL2
chr2:25981909(-) A-I      intronic
chr2:25980340(-) A-I      intronic
chr2:26004734(-) A-I      intronic
chr2:26004728(-) A-I      intronic
chr2:25981921(-) A-I      intronic
chr2:25995929(-) A-I      intronic
chr2:25995995(-) A-I      intronic
chr2:25996038(-) A-I      intronic
chr2:26000081(-) A-I      intronic
chr2:26000107(-) A-I      intronic
chr2:26000140(-) A-I      intronic
chr2:26000163(-) A-I      intronic
chr2:26000343(-) A-I      intronic
chr2:26002144(-) A-I      intronic
chr2:26002162(-) A-I      intronic
chr2:26002239(-) A-I      intronic
chr2:26002810(-) A-I      intronic
chr2:26002822(-) A-I      intronic
chr2:26002833(-) A-I      intronic
chr2:26002861(-) A-I      intronic
chr2:26002865(-) A-I      intronic
chr2:26002874(-) A-I      intronic
chr2:26002992(-) A-I      intronic
chr2:26003798(-) A-I      intronic
chr2:26003805(-) A-I      intronic
chr2:26003831(-) A-I      intronic
chr2:26004602(-) A-I      intronic
chr2:26004604(-) A-I      intronic
chr2:26004634(-) A-I      intronic
chr2:26004875(-) A-I      intronic
chr2:26004956(-) A-I      intronic
chr2:26005332(-) A-I      intronic
chr2:26005352(-) A-I      intronic
chr2:26005793(-) A-I      intronic
chr2:26005879(-) A-I      intronic
chr2:26006731(-) A-I      intronic
chr2:26006760(-) A-I      intronic
chr2:26006860(-) A-I      intronic
chr2:26008610(-) A-I      intronic
chr2:26008689(-) A-I      intronic
chr2:26009207(-) A-I      intronic
chr2:26009274(-) A-I      intronic
chr2:26009280(-) A-I      intronic
chr2:26009304(-) A-I      intronic
chr2:26009375(-) A-I      intronic
chr2:26009667(-) A-I      intronic
chr2:26009718(-) A-I      intronic
chr2:26014190(-) A-I      intronic
chr2:26014201(-) A-I      intronic
chr2:26014273(-) A-I      intronic
chr2:26014994(-) A-I      intronic
chr2:26015146(-) A-I      intronic
chr2:26015612(-) A-I      intronic
chr2:26015748(-) A-I      intronic
chr2:26015980(-) A-I      intronic
chr2:26016002(-) A-I      intronic
chr2:26016093(-) A-I      intronic
chr2:26022831(-) A-I      intronic
chr2:26022847(-) A-I      intronic
chr2:26023874(-) A-I      intronic
chr2:26028655(-) A-I      intronic
chr2:26028661(-) A-I      intronic
chr2:26028666(-) A-I      intronic
chr2:26028683(-) A-I      intronic
chr2:26033876(-) A-I      intronic
chr2:26034785(-) A-I      intronic
chr2:26034791(-) A-I      intronic
chr2:26034797(-) A-I      intronic
chr2:26034798(-) A-I      intronic
chr2:26034800(-) A-I      intronic
chr2:26034812(-) A-I      intronic
chr2:26034838(-) A-I      intronic
chr2:26034903(-) A-I      intronic
chr2:26035247(-) A-I      intronic
chr2:26035260(-) A-I      intronic
chr2:26044131(-) A-I      intronic
chr2:26054086(-) A-I      intronic
chr2:26057100(-) A-I      intronic
chr2:26057122(-) A-I      intronic
chr2:26057830(-) A-I      intronic
chr2:26057870(-) A-I      intronic
chr2:26057886(-) A-I      intronic
chr2:26057973(-) A-I      intronic
chr2:26060464(-) A-I      intronic
chr2:26060516(-) A-I      intronic
chr2:26060531(-) A-I      intronic
chr2:26062567(-) A-I      intronic
chr2:26062584(-) A-I      intronic
chr2:26063950(-) A-I      intronic
chr2:26067206(-) A-I      intronic
chr2:26067581(-) A-I      intronic
chr2:26067739(-) A-I      intronic
chr2:26067773(-) A-I      intronic
chr2:26072482(-) A-I      intronic
chr2:26072604(-) A-I      intronic
chr2:26072636(-) A-I      intronic
chr2:26078192(-) A-I      intronic
chr2:26078333(-) A-I      intronic
chr2:26078335(-) A-I      intronic
chr2:26078341(-) A-I      intronic
chr2:26078452(-) A-I      intronic
chr2:26081375(-) A-I      intronic
chr2:26081435(-) A-I      intronic
chr2:26081510(-) A-I      intronic
chr2:26081535(-) A-I      intronic
chr2:26081861(-) A-I      intronic
chr2:26081865(-) A-I      intronic
chr2:26081935(-) A-I      intronic
chr2:26086031(-) A-I      intronic
chr2:26087858(-) A-I      intronic
chr2:26087859(-) A-I      intronic
chr2:26087862(-) A-I      intronic
chr2:26087888(-) A-I      intronic
chr2:26088082(-) A-I      intronic
chr2:26088097(-) A-I      intronic
chr2:26088189(-) A-I      intronic
chr2:26088214(-) A-I      intronic
chr2:26088215(-) A-I      intronic
chr2:26088218(-) A-I      intronic
chr2:26088257(-) A-I      intronic
chr2:26089068(-) A-I      intronic
chr2:26089286(-) A-I      intronic
chr2:26089713(-) A-I      intronic
chr2:26090042(-) A-I      intronic
chr2:26090050(-) A-I      intronic
chr2:26091951(-) A-I      intronic
chr2:26091952(-) A-I      intronic
chr2:26091995(-) A-I      intronic
chr2:26094585(-) A-I      intronic
chr2:26094607(-) A-I      intronic
chr2:26095199(-) A-I      intronic
chr2:26096197(-) A-I      intronic
chr2:26096198(-) A-I      intronic
chr2:26096217(-) A-I      intronic
chr2:26096242(-) A-I      intronic
chr2:26096247(-) A-I      intronic
chr2:26097922(-) A-I      intronic
chr2:25971275(-) A-I      intronic
chr2:25971292(-) A-I      intronic
chr2:25971293(-) A-I      intronic
chr2:25974713(-) A-I      intronic
chr2:25974746(-) A-I      intronic
chr2:25974853(-) A-I      intronic
chr2:25976112(-) A-I      intronic
chr2:25976114(-) A-I      intronic
chr2:25993283(-) A-I      intronic
chr2:25993538(-) A-I      intronic
chr2:25994093(-) A-I      intronic
chr2:25994095(-) A-I      intronic
chr2:25995429(-) A-I      intronic
chr2:25995435(-) A-I      intronic
chr2:26096233(-) A-I      intronic
chr2:26093455(-) A-I      intronic
chr2:25980461(-) A-I      intronic
chr2:26081911(-) A-I      intronic
chr2:26023960(-) A-I      intronic
chr2:26088137(-) A-I      intronic
chr2:26095247(-) A-I      intronic
chr2:26023126(-) A-I      intronic
chr2:26004158(-) A-I      intronic
chr2:26035290(-) A-I      intronic
chr2:26003844(-) A-I      intronic
chr2:26004676(-) A-I      intronic
chr2:25993108(-) A-I      intronic
chr2:25993502(-) A-I      intronic
chr2:26000159(-) A-I      intronic
chr2:26000108(-) A-I      intronic
chr2:26081943(-) A-I      intronic
chr2:26009358(-) A-I      intronic
chr2:26087728(-) A-I      intronic
chr2:26013939(-) A-I      intronic
chr2:26063922(-) A-I      intronic
chr2:26005293(-) A-I      intronic
chr2:26004649(-) A-I      intronic
chr2:26015590(-) A-I      intronic
chr2:26000387(-) A-I      intronic
chr2:26008649(-) A-I      intronic
chr2:26067197(-) A-I      intronic
chr2:26086009(-) A-I      intronic
chr2:26002772(-) A-I      intronic
chr2:26014193(-) A-I      intronic
chr2:26009248(-) A-I      intronic
chr2:26092077(-) A-I      intronic
chr2:26092679(-) A-I      intronic
chr2:26035272(-) A-I      intronic
chr2:26003792(-) A-I      intronic
chr2:25993282(-) A-I      intronic
chr2:26092603(-) A-I      intronic
chr2:26004694(-) A-I      intronic
chr2:26043720(-) A-I      intronic
chr2:26003845(-) A-I      intronic
chr2:26082009(-) A-I      intronic
chr2:26004646(-) A-I      intronic
chr2:26003775(-) A-I      intronic
chr2:26016057(-) A-I      intronic
chr2:26088447(-) A-I      intronic
chr2:26000382(-) A-I      intronic
chr2:26003767(-) A-I      intronic
chr2:25982119(-) A-I      intronic
chr2:25993299(-) A-I      intronic
chr2:26004227(-) A-I      intronic
chr2:26015070(-) A-I      intronic
chr2:26042847(-) A-I      intronic
chr2:26004702(-) A-I      intronic
chr2:26081540(-) A-I      intronic
chr2:26002957(-) A-I      intronic
chr2:26004773(-) A-I      intronic
chr2:26015919(-) A-I      intronic
chr2:26081426(-) A-I      intronic
chr2:25991208(-) A-I      intronic
chr2:26013885(-) A-I      intronic
chr2:26078155(-) A-I      intronic
chr2:26088295(-) A-I      intronic
chr2:26003896(-) A-I      intronic
chr2:26015694(-) A-I      intronic
chr2:26013735(-) A-I      intronic
chr2:26016092(-) A-I      intronic
chr2:26002912(-) A-I      intronic
chr2:26085607(-) A-I      intronic
chr2:26006553(-) A-I      intronic
chr2:26034745(-) A-I      intronic
chr2:26086372(-) A-I      intronic
chr2:26067228(-) A-I      intronic
chr2:26004752(-) A-I      intronic
chr2:26022779(-) A-I      intronic
chr2:26004873(-) A-I      intronic
chr2:26015693(-) A-I      intronic
chr2:26095139(-) A-I      intronic
chr2:26078260(-) A-I      intronic
chr2:26006837(-) A-I      intronic
chr2:26067199(-) A-I      intronic
chr2:26093458(-) A-I      intronic
chr2:26005817(-) A-I      intronic
chr2:26087904(-) A-I      intronic
chr2:26002962(-) A-I      intronic
chr2:26009367(-) A-I      intronic
chr2:26056483(-) A-I      intronic
chr2:26000138(-) A-I      intronic
chr2:26067705(-) A-I      intronic
chr2:26008619(-) A-I      intronic
chr2:26078901(-) A-I      intronic
chr2:26088219(-) A-I      intronic
chr2:26093472(-) A-I      intronic
chr2:26024099(-) A-I      intronic
chr2:26009177(-) A-I      intronic
chr2:26092862(-) A-I      intronic
chr2:26009488(-) A-I      intronic
chr2:26014944(-) A-I      intronic
chr2:26002044(-) A-I      intronic
chr2:26078151(-) A-I      intronic
chr2:26008252(-) A-I      intronic
chr2:26086051(-) A-I      intronic
chr2:26009540(-) A-I      intronic
chr2:26008620(-) A-I      intronic
chr2:26089204(-) A-I      intronic
chr2:26004581(-) A-I      intronic
chr2:26004184(-) A-I      intronic
chr2:26057820(-) A-I      intronic
chr2:25968290(-) A-I      intronic
chr2:26009178(-) A-I      intronic
chr2:26090220(-) A-I      intronic
chr2:26057900(-) A-I      intronic
chr2:26004686(-) A-I      intronic
chr2:25975576(-) A-I      intronic
chr2:26009601(-) A-I      intronic
chr2:25993183(-) A-I      intronic
chr2:26092682(-) A-I      intronic
chr2:26004572(-) A-I      intronic
chr2:26071380(-) A-I      intronic
chr2:26087773(-) A-I      intronic
chr2:26007044(-) A-I      intronic
chr2:25993260(-) A-I      intronic
chr2:26009283(-) A-I      intronic
chr2:25993381(-) A-I      intronic
chr2:25976001(-) A-I      intronic
chr2:26035106(-) A-I      intronic
chr2:26006550(-) A-I      intronic
chr2:26004508(-) A-I      intronic
chr2:26087839(-) A-I      intronic
chr2:26002140(-) A-I      intronic
chr2:26022763(-) A-I      intronic
chr2:26057965(-) A-I      intronic
chr2:25975952(-) A-I      intronic
chr2:26004635(-) A-I      intronic
chr2:26004218(-) A-I      intronic
chr2:26004160(-) A-I      intronic
chr2:25993406(-) A-I      intronic
chr2:26049788(-) A-I      intronic
chr2:26078243(-) A-I      intronic
chr2:26009583(-) A-I      intronic
chr2:26088299(-) A-I      intronic
chr2:26009212(-) A-I      intronic
chr2:26016095(-) A-I      intronic
chr2:26043689(-) A-I      intronic
chr2:26072484(-) A-I      intronic
chr2:26057056(-) A-I      intronic
chr2:25976109(-) A-I      intronic
chr2:26034022(-) A-I      intronic
chr2:26006668(-) A-I      intronic
chr2:26085606(-) A-I      intronic
chr2:26071832(-) A-I      intronic
chr2:26006757(-) A-I      intronic
chr2:26016020(-) A-I      intronic
chr2:26087924(-) A-I      intronic
chr2:26000110(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ASXL2
chr2:26029209(-) C-A intron -    21725310
chr2:25975454(-) A-G intron -    22484847
chr2:25975576(-) A-G intron -    22484847
chr2:25976109(-) A-G intron -    22484847
chr2:25980318(-) A-G intron -    22484847
chr2:25993108(-) A-G intron -    22484847
chr2:25993261(-) A-G intron -    22484847
chr2:25998190(-) A-G intron -    22484847
chr2:26000159(-) A-G intron -    22484847
chr2:26002186(-) A-G intron -    22484847
chr2:26002937(-) A-G intron -    22484847
chr2:26003767(-) A-G intron -    22484847
chr2:26003792(-) A-G intron -    22484847
chr2:26003841(-) A-G intron -    22484847
chr2:26003844(-) A-G intron -    22484847
chr2:26003845(-) A-G intron -    22484847
chr2:26003896(-) A-G intron -    22484847
chr2:26004184(-) A-G intron -    22484847
chr2:26004227(-) A-G intron -    22484847
chr2:26005384(-) A-G intron -    22484847
chr2:26005817(-) A-G intron -    22484847
chr2:26006757(-) A-G intron -    22484847
chr2:26006837(-) A-G intron -    22484847
chr2:26006840(-) A-G intron -    22484847
chr2:26006871(-) A-G intron -    22484847
chr2:26009178(-) A-G intron -    22484847
chr2:26009248(-) A-G intron -    22484847
chr2:26009277(-) A-G intron -    22484847
chr2:26009278(-) A-G intron -    22484847
chr2:26009279(-) A-G intron -    22484847
chr2:26009367(-) A-G intron -    22484847
chr2:26013885(-) A-G intron -    22484847
chr2:26014173(-) A-G intron -    22484847
chr2:26014193(-) A-G intron -    22484847
chr2:26015693(-) A-G intron -    22484847
chr2:26015694(-) A-G intron -    22484847
chr2:26015702(-) A-G intron -    22484847
chr2:26015730(-) A-G intron -    22484847
chr2:26016020(-) A-G intron -    22484847
chr2:26016038(-) A-G intron -    22484847
chr2:26016057(-) A-G intron -    22484847
chr2:26016079(-) A-G intron -    22484847
chr2:26022795(-) A-G intron -    22484847
chr2:26023123(-) A-G intron -    22484847
chr2:26023126(-) A-G intron -    22484847
chr2:26034745(-) A-G intron -    22484847
chr2:26035272(-) A-G intron -    22484847
chr2:26035290(-) A-G intron -    22484847
chr2:26043720(-) A-G intron -    22484847
chr2:26057820(-) A-G intron -    22484847
chr2:26057900(-) A-G intron -    22484847
chr2:26067705(-) A-G intron -    22484847
chr2:26072681(-) A-G intron -    22484847
chr2:26072694(-) A-G intron -    22484847
chr2:26078243(-) A-G intron -    22484847
chr2:26078260(-) A-G intron -    22484847
chr2:26081426(-) A-G intron -    22484847
chr2:26081540(-) A-G intron -    22484847
chr2:26081911(-) A-G intron -    22484847
chr2:26081943(-) A-G intron -    22484847
chr2:26083073(-) G-T intron -    22484847
chr2:26085606(-) A-G intron -    22484847
chr2:26085607(-) A-G intron -    22484847
chr2:26086009(-) A-G intron -    22484847
chr2:26086077(-) A-G intron -    22484847
chr2:26087865(-) A-G intron -    22484847
chr2:26087904(-) A-G intron -    22484847
chr2:26088043(-) A-G intron -    22484847
chr2:26088137(-) A-G intron -    22484847
chr2:26088219(-) A-G intron -    22484847
chr2:26088295(-) A-G intron -    22484847
chr2:26088447(-) A-G intron -    22484847
chr2:26089203(-) A-G intron -    22484847
chr2:26089204(-) A-G intron -    22484847
chr2:26092603(-) A-G intron -    22484847
chr2:26092679(-) A-G intron -    22484847
chr2:26092682(-) A-G intron -    22484847
chr2:26092862(-) A-G intron -    22484847
chr2:26093270(-) A-G intron -    22484847
chr2:26095139(-) A-G intron -    22484847
chr2:26095143(-) A-G intron -    22484847
chr2:26095175(-) A-G intron -    22484847
chr2:26095247(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ASXL2
chr2:25956678-25956679(-) m6A 3'UTR       27773535
chr2:25956718-25956719(-) m6A 3'UTR       27773535
chr2:25956790-25956791(-) m6A 3'UTR       27773535
chr2:25960369-25960370(-) m6A 3'UTR       27773535
chr2:25960417-25960418(-) m6A 3'UTR       27773535
chr2:25960550-25960551(-) m6A 3'UTR       27773535
chr2:25963085-25963086(-) m6A 3'UTR       24981863//27773535
chr2:25963238-25963239(-) m6A 3'UTR       27773535
chr2:25963247-25963248(-) m6A 3'UTR       27773535
chr2:25964892-25964893(-) m6A 3'UTR       24284625//24981863
chr2:25964927-25964928(-) m6A CDS       24284625//24981863
chr2:25965033-25965034(-) m6A CDS       24284625//24981863//27773535//22608085
chr2:25965064-25965065(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr2:25965186-25965187(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr2:25965268-25965269(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr2:25965309-25965310(-) m6A CDS       24284625//24209618//27773535//22608085
chr2:25965427-25965428(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr2:25965442-25965443(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr2:25965484-25965485(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr2:25965550-25965551(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:25965566-25965567(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:25965711-25965712(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr2:25965771-25965772(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr2:25965784-25965785(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr2:25965854-25965855(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr2:25965862-25965863(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr2:25965909-25965910(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr2:25966000-25966001(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:25966034-25966035(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:25966068-25966069(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:25966138-25966139(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:25966175-25966176(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:25966295-25966296(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:25966382-25966383(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:25966394-25966395(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:25966404-25966405(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:25966414-25966415(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:25966423-25966424(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:25966585-25966586(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:25966721-25966722(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr2:25966785-25966786(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr2:25966790-25966791(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085
chr2:25966879-25966880(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr2:25966933-25966934(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25966939-25966940(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25966957-25966958(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25967005-25967006(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25967015-25967016(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25967038-25967039(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25967052-25967053(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25967080-25967081(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr2:25967111-25967112(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:25967129-25967130(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:25967140-25967141(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:25967229-25967230(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:25967239-25967240(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr2:25967251-25967252(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr2:25972598-25972599(-) m6A CDS       24284625//24209618//24981863//27773535
chr2:25972765-25972766(-) m6A CDS       24284625//27773535
chr2:25972779-25972780(-) m6A CDS       24284625
chr2:25972819-25972820(-) m6A CDS       24284625
chr2:25972843-25972844(-) m6A CDS       24284625//27773535
chr2:25972913-25972914(-) m6A CDS       24284625//27773535
chr2:25972930-25972931(-) m6A CDS       27773535
chr2:25973203-25973204(-) m6A CDS       24981863
chr2:25973214-25973215(-) m6A CDS       24981863
chr2:25976431-25976432(-) m6A CDS       24981863
chr2:25982472-25982473(-) m6A CDS       27773535
chr2:25982499-25982500(-) m6A CDS       27773535
chr2:25990461-25990462(-) m6A 5'UTR//CDS       27773535
chr2:25990540-25990541(-) m6A 5'UTR//CDS       27773535
chr2:25990546-25990547(-) m6A 5'UTR//CDS       27773535
chr2:25990566-25990567(-) m6A 5'UTR//CDS       27773535
chr2:25991614-25991615(-) m6A 5'UTR//CDS       24981863//27773535
chr2:25991649-25991650(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535
chr2:26022318-26022319(-) m6A CDS//exon       24209618//24981863//27773535
chr2:26032869-26032870(-) m6A intron       27773535
chr2:26032892-26032893(-) m6A intron       27773535
chr2:26033188-26033189(-) m6A intron       22608085
chr2:26079453-26079454(-) m6A intron       -
chr2:26079463-26079464(-) m6A intron       -
chr2:26079503-26079504(-) m6A intron       -
chr2:26079510-26079511(-) m6A intron       -
chr2:26079562-26079563(-) m6A intron       -
chr2:26101057-26101058(-) m6A 5'UTR//CDS       24284625//24981863//27773535//27371828//27773536
chr2:26101066-26101067(-) m1A 5'UTR//CDS       26863196
chr2:26101097-26101098(-) m6A 5'UTR       24284625//24981863//27773535//27371828//27773536
chr2:26101124-26101125(-) m6A 5'UTR       24284625//24981863//27773535//27371828//27773536
chr2:26101262-26101263(-) m6A 5'UTR       24284625//24981863//27371828//27773536
chr2:26101278-26101279(-) m6A 5'UTR       24284625//24981863//27371828//27773536
chr2:26101323-26101324(-) m6A 5'UTR       24981863//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-320d
Exosome Pooled sera     27278097
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Plasma     23663360
Exosome Breast cancer cell lines (MCF-7|MDA-MB-231)     24468161
Exosome Colon cancer cell line (LIM1863)     25330373
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
ASXL2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-320d
Eloxatine 5310940 Drug interaction    RC00007888
5-Fluorouracil 3385 Drug interaction    RC00007885
Doxorubicin 31703 Drug interaction    RC00007886
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007884
Docetaxel 148124 Drug interaction    RC00007887
Marine fungal metabolite 1386A - Drug interaction    RC00007889
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-320d

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-320d
Interactor2: ASXL2

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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