Detail Information

Basic Information:


  VIRBase ID:  

HHID00070774

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-1276:           TNPO3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-1276 TNPO3
miRBase
Accession/Entrez ID
MIMAT0005930 23534
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - IPO12//LGMD1F//LGMDD2//MTR10A//TRN-SR//TRN-SR2//TRNSR

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-1276
rs372186220 chr15:85770551    C/T
rs759704230 chr15:85770557    A/G
rs949716743 chr15:85770550    T/C
rs1469123493 chr15:85770565    T/C
rs34381260 chr15:85770563    CT/C
rs34381260 chr15:85770563    CT/CTT
rs750237476 chr15:85770564    T/C
rs764239400 chr15:85770562    T/C
rs769744052 chr15:85770560    G/A
rs775843960 chr15:85770561    C/A
rs775843960 chr15:85770561    C/T

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TNPO3
chr7:128676113(-) A-I      intronic
chr7:128676110(-) A-I      intronic
chr7:128676070(-) A-I      intronic
chr7:128676068(-) A-I      intronic
chr7:128675216(-) A-I      intronic
chr7:128675200(-) A-I      intronic
chr7:128675155(-) A-I      intronic
chr7:128675072(-) A-I      intronic
chr7:128675070(-) A-I      intronic
chr7:128674902(-) A-I      intronic
chr7:128674887(-) A-I      intronic
chr7:128674862(-) A-I      intronic
chr7:128674849(-) A-I      intronic
chr7:128674837(-) A-I      intronic
chr7:128674830(-) A-I      intronic
chr7:128674827(-) A-I      intronic
chr7:128674709(-) A-I      intronic
chr7:128674396(-) A-I      intronic
chr7:128673933(-) A-I      intronic
chr7:128673859(-) A-I      intronic
chr7:128673855(-) A-I      intronic
chr7:128673848(-) A-I      intronic
chr7:128671968(-) A-I      intronic
chr7:128671340(-) A-I      intronic
chr7:128671296(-) A-I      intronic
chr7:128671245(-) A-I      intronic
chr7:128671147(-) A-I      intronic
chr7:128667532(-) A-I      intronic
chr7:128667011(-) A-I      intronic
chr7:128666993(-) A-I      intronic
chr7:128666722(-) A-I      intronic
chr7:128666708(-) A-I      intronic
chr7:128666689(-) A-I      intronic
chr7:128666636(-) A-I      intronic
chr7:128666630(-) A-I      intronic
chr7:128666595(-) A-I      intronic
chr7:128693134(-) A-I      intronic
chr7:128691880(-) A-I      intronic
chr7:128691794(-) A-I      intronic
chr7:128679399(-) A-I      intronic
chr7:128675555(-) A-I      intronic
chr7:128599935(-) A-I      intronic
chr7:128666594(-) A-I      intronic
chr7:128666581(-) A-I      intronic
chr7:128666166(-) A-I      intronic
chr7:128666058(-) A-I      intronic
chr7:128666017(-) A-I      intronic
chr7:128665988(-) A-I      intronic
chr7:128665936(-) A-I      intronic
chr7:128665713(-) A-I      intronic
chr7:128662317(-) A-I      intronic
chr7:128662295(-) A-I      intronic
chr7:128662273(-) A-I      intronic
chr7:128661309(-) A-I      intronic
chr7:128661281(-) A-I      intronic
chr7:128660741(-) A-I      intronic
chr7:128660683(-) A-I      intronic
chr7:128660658(-) A-I      intronic
chr7:128660645(-) A-I      intronic
chr7:128660642(-) A-I      intronic
chr7:128660625(-) A-I      intronic
chr7:128659759(-) A-I      intronic
chr7:128659045(-) A-I      intronic
chr7:128658976(-) A-I      intronic
chr7:128658937(-) A-I      intronic
chr7:128658900(-) A-I      intronic
chr7:128658862(-) A-I      intronic
chr7:128650893(-) A-I      intronic
chr7:128650517(-) A-I      intronic
chr7:128650421(-) A-I      intronic
chr7:128650378(-) A-I      intronic
chr7:128648167(-) A-I      intronic
chr7:128648117(-) A-I      intronic
chr7:128648084(-) A-I      intronic
chr7:128647970(-) A-I      intronic
chr7:128647960(-) A-I      intronic
chr7:128638364(-) A-I      intronic
chr7:128636740(-) A-I      intronic
chr7:128636697(-) A-I      intronic
chr7:128636673(-) A-I      intronic
chr7:128636572(-) A-I      intronic
chr7:128635901(-) A-I      intronic
chr7:128635890(-) A-I      intronic
chr7:128635877(-) A-I      intronic
chr7:128635783(-) A-I      intronic
chr7:128634350(-) A-I      intronic
chr7:128634285(-) A-I      intronic
chr7:128629079(-) A-I      intronic
chr7:128629074(-) A-I      intronic
chr7:128629023(-) A-I      intronic
chr7:128629009(-) A-I      intronic
chr7:128628898(-) A-I      intronic
chr7:128638692(-) A-I      intronic
chr7:128598923(-) A-I      intronic
chr7:128598926(-) A-I      intronic
chr7:128598934(-) A-I      intronic
chr7:128598949(-) A-I      intronic
chr7:128598989(-) A-I      intronic
chr7:128598996(-) A-I      intronic
chr7:128599014(-) A-I      intronic
chr7:128599032(-) A-I      intronic
chr7:128660606(-) A-I      intronic
chr7:128660622(-) A-I      intronic
chr7:128660626(-) A-I      intronic
chr7:128660640(-) A-I      intronic
chr7:128628309(-) A-I      intronic
chr7:128628256(-) A-I      intronic
chr7:128628226(-) A-I      intronic
chr7:128627826(-) A-I      intronic
chr7:128627767(-) A-I      intronic
chr7:128623504(-) A-I      intronic
chr7:128623421(-) A-I      intronic
chr7:128622064(-) A-I      intronic
chr7:128621959(-) A-I      intronic
chr7:128621950(-) A-I      intronic
chr7:128620738(-) A-I      intronic
chr7:128620661(-) A-I      intronic
chr7:128620553(-) A-I      intronic
chr7:128620499(-) A-I      intronic
chr7:128620477(-) A-I      intronic
chr7:128616684(-) A-I      intronic
chr7:128602424(-) A-I      intronic
chr7:128602422(-) A-I      intronic
chr7:128602373(-) A-I      intronic
chr7:128602372(-) A-I      intronic
chr7:128602307(-) A-I      intronic
chr7:128602297(-) A-I      intronic
chr7:128602291(-) A-I      intronic
chr7:128602230(-) A-I      intronic
chr7:128601019(-) A-I      intronic
chr7:128601018(-) A-I      intronic
chr7:128600951(-) A-I      intronic
chr7:128600938(-) A-I      intronic
chr7:128600910(-) A-I      intronic
chr7:128600071(-) A-I      intronic
chr7:128600043(-) A-I      intronic
chr7:128599822(-) A-I      intronic
chr7:128599817(-) A-I      intronic
chr7:128599052(-) A-I      intronic
chr7:128599011(-) A-I      intronic
chr7:128599008(-) A-I      intronic
chr7:128598990(-) A-I      intronic
chr7:128598426(-) A-I      intronic
chr7:128598400(-) A-I      intronic
chr7:128598393(-) A-I      intronic
chr7:128598342(-) A-I      intronic
chr7:128598309(-) A-I      intronic
chr7:128598295(-) A-I      intronic
chr7:128598227(-) A-I      intronic
chr7:128674428(-) A-I      intronic
chr7:128693303(-) A-I      intronic
chr7:128693267(-) A-I      intronic
chr7:128693257(-) A-I      intronic
chr7:128693249(-) A-I      intronic
chr7:128691902(-) A-I      intronic
chr7:128691866(-) A-I      intronic
chr7:128691826(-) A-I      intronic
chr7:128691822(-) A-I      intronic
chr7:128691685(-) A-I      intronic
chr7:128691610(-) A-I      intronic
chr7:128691609(-) A-I      intronic
chr7:128691592(-) A-I      intronic
chr7:128691571(-) A-I      intronic
chr7:128690061(-) A-I      intronic
chr7:128690043(-) A-I      intronic
chr7:128690025(-) A-I      intronic
chr7:128690019(-) A-I      intronic
chr7:128688152(-) A-I      intronic
chr7:128688136(-) A-I      intronic
chr7:128688024(-) A-I      intronic
chr7:128676274(-) A-I      intronic
chr7:128676257(-) A-I      intronic
chr7:128646040(-) A-I      intronic
chr7:128627759(-) A-I      intronic
chr7:128665746(-) A-I      intronic
chr7:128598469(-) A-I      intronic
chr7:128671987(-) A-I      intronic
chr7:128599541(-) A-I      intronic
chr7:128599044(-) A-I      intronic
chr7:128648201(-) A-I      intronic
chr7:128598898(-) A-I      intronic
chr7:128636675(-) A-I      intronic
chr7:128665158(-) A-I      intronic
chr7:128623464(-) A-I      intronic
chr7:128598226(-) A-I      intronic
chr7:128691573(-) A-I      intronic
chr7:128629125(-) A-I      intronic
chr7:128651514(-) A-I      intronic
chr7:128673858(-) A-I      intronic
chr7:128634415(-) A-I      intronic
chr7:128638290(-) A-I      intronic
chr7:128659740(-) A-I      intronic
chr7:128650425(-) A-I      intronic
chr7:128627732(-) A-I      intronic
chr7:128669887(-) A-I      intronic
chr7:128674340(-) A-I      intronic
chr7:128686141(-) A-I      intronic
chr7:128667105(-) A-I      intronic
chr7:128691563(-) A-I      intronic
chr7:128637299(-) A-I      intronic
chr7:128666639(-) A-I      intronic
chr7:128599831(-) A-I      intronic
chr7:128674357(-) A-I      intronic
chr7:128691570(-) A-I      intronic
chr7:128638588(-) A-I      intronic
chr7:128599497(-) A-I      intronic
chr7:128635786(-) A-I      intronic
chr7:128693296(-) A-I      intronic
chr7:128660790(-) A-I      intronic
chr7:128676086(-) A-I      intronic
chr7:128676156(-) A-I      intronic
chr7:128660034(-) A-I      intronic
chr7:128662236(-) A-I      intronic
chr7:128659752(-) A-I      intronic
chr7:128691893(-) A-I      intronic
chr7:128666621(-) A-I      intronic
chr7:128691500(-) A-I      intronic
chr7:128599539(-) A-I      intronic
chr7:128648091(-) A-I      intronic
chr7:128620458(-) A-I      intronic
chr7:128634416(-) A-I      intronic
chr7:128638362(-) A-I      intronic
chr7:128598914(-) A-I      intronic
chr7:128636685(-) A-I      intronic
chr7:128627731(-) A-I      intronic
chr7:128673845(-) A-I      intronic
chr7:128665698(-) A-I      intronic
chr7:128691836(-) A-I      intronic
chr7:128667427(-) A-I      intronic
chr7:128693255(-) A-I      intronic
chr7:128634850(-) A-I      intronic
chr7:128646030(-) A-I      intronic
chr7:128667418(-) A-I      intronic
chr7:128666730(-) A-I      intronic
chr7:128634349(-) A-I      intronic
chr7:128620436(-) A-I      intronic
chr7:128660570(-) A-I      intronic
chr7:128635956(-) A-I      intronic
chr7:128600952(-) A-I      intronic
chr7:128629055(-) A-I      intronic
chr7:128691528(-) A-I      intronic
chr7:128691701(-) A-I      intronic
chr7:128673884(-) A-I      intronic
chr7:128666944(-) A-I      intronic
chr7:128629048(-) A-I      intronic
chr7:128598946(-) A-I      intronic
chr7:128599992(-) A-I      intronic
chr7:128676368(-) A-I      intronic
chr7:128638477(-) A-I      intronic
chr7:128598976(-) A-I      intronic
chr7:128628912(-) A-I      intronic
chr7:128628302(-) A-I      intronic
chr7:128675406(-) A-I      intronic
chr7:128666117(-) A-I      intronic
chr7:128674435(-) A-I      intronic
chr7:128601110(-) A-I      intronic
chr7:128612005(-) A-I      intronic
chr7:128660110(-) A-I      intronic
chr7:128620405(-) A-I      intronic
chr7:128681402(-) A-I      intronic
chr7:128638558(-) A-I      intronic
chr7:128681266(-) A-I      intronic
chr7:128688109(-) A-I      intronic
chr7:128612055(-) A-I      intronic
chr7:128598294(-) A-I      intronic
chr7:128622030(-) A-I      intronic
chr7:128650360(-) A-I      intronic
chr7:128672036(-) A-I      intronic
chr7:128634264(-) A-I      intronic
chr7:128665256(-) A-I      intronic
chr7:128598936(-) A-I      intronic
chr7:128638559(-) A-I      intronic
chr7:128652198(-) A-I      intronic
chr7:128676409(-) A-I      intronic
chr7:128667078(-) A-I      intronic
chr7:128599012(-) A-I      intronic
chr7:128622062(-) A-I      intronic
chr7:128637272(-) A-I      intronic
chr7:128598981(-) A-I      intronic
chr7:128675139(-) A-I      intronic
chr7:128650345(-) A-I      intronic
chr7:128598326(-) A-I      intronic
chr7:128691970(-) A-I      intronic
chr7:128691590(-) A-I      intronic
chr7:128660592(-) A-I      intronic
chr7:128620705(-) A-I      intronic
chr7:128598470(-) A-I      intronic
chr7:128622033(-) A-I      intronic
chr7:128627751(-) A-I      intronic
chr7:128672013(-) A-I      intronic
chr7:128660524(-) A-I      intronic
chr7:128648336(-) A-I      intronic
chr7:128627870(-) A-I      intronic
chr7:128660781(-) A-I      intronic
chr7:128691842(-) A-I      intronic
chr7:128654525(-) A-I      intronic
chr7:128665740(-) A-I      intronic
chr7:128637325(-) A-I      intronic
chr7:128688072(-) A-I      intronic
chr7:128690031(-) A-I      intronic
chr7:128598903(-) A-I      intronic
chr7:128665146(-) A-I      intronic
chr7:128666080(-) A-I      intronic
chr7:128675422(-) A-I      intronic
chr7:128598918(-) A-I      intronic
chr7:128676146(-) A-I      intronic
chr7:128599963(-) A-I      intronic
chr7:128648120(-) A-I      intronic
chr7:128674365(-) A-I      intronic
chr7:128638466(-) A-I      intronic
chr7:128599531(-) A-I      intronic
chr7:128671974(-) A-I      intronic
chr7:128688038(-) A-I      intronic
chr7:128669895(-) A-I      intronic
chr7:128598287(-) A-I      intronic
chr7:128674358(-) A-I      intronic
chr7:128599523(-) A-I      intronic
chr7:128690021(-) A-I      intronic
chr7:128638410(-) A-I      intronic
chr7:128637303(-) A-I      intronic
chr7:128669820(-) A-I      intronic
chr7:128652229(-) A-I      intronic
chr7:128629031(-) A-I      intronic
chr7:128600023(-) A-I      intronic
chr7:128676186(-) A-I      intronic
chr7:128665935(-) A-I      intronic
chr7:128676040(-) A-I      intronic
chr7:128600986(-) A-I      intronic
chr7:128676227(-) A-I      intronic
chr7:128621845(-) A-I      intronic
chr7:128676140(-) A-I      intronic
chr7:128629049(-) A-I      intronic
chr7:128601088(-) A-I      intronic
chr7:128634408(-) A-I      intronic
chr7:128691538(-) A-I      intronic
chr7:128636608(-) A-I      intronic
chr7:128667430(-) A-I      intronic
chr7:128648081(-) A-I      intronic
chr7:128667515(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TNPO3
chr7:128671974(-) A-I intron -    22327324
chr7:128675542(-) A-I intron -    22327324
chr7:128672040(-) A-I intron -    21960545
chr7:128672040(-) A-G intron -    22484847
chr7:128598294(-) A-G intron -    22484847
chr7:128598903(-) A-G intron -    22484847
chr7:128598914(-) A-G intron -    22484847
chr7:128598918(-) A-G intron -    22484847
chr7:128598936(-) A-G intron -    22484847
chr7:128598946(-) A-G intron -    22484847
chr7:128598976(-) A-G intron -    22484847
chr7:128598981(-) A-G intron -    22484847
chr7:128599012(-) A-G intron -    22484847
chr7:128599020(-) A-G intron -    22484847
chr7:128599044(-) A-G intron -    22484847
chr7:128599523(-) A-G intron -    22484847
chr7:128599539(-) A-G intron -    22484847
chr7:128599541(-) A-G intron -    22484847
chr7:128600899(-) A-G intron -    22484847
chr7:128600952(-) A-G intron -    22484847
chr7:128600986(-) A-G intron -    22484847
chr7:128601087(-) A-G intron -    22484847
chr7:128601088(-) A-G intron -    22484847
chr7:128602163(-) A-G intron -    22484847
chr7:128612005(-) A-G intron -    22484847
chr7:128612055(-) A-G intron -    22484847
chr7:128612062(-) A-G intron -    22484847
chr7:128618811(-) C-T intron -    22484847
chr7:128620405(-) A-G intron -    22484847
chr7:128620436(-) A-G intron -    22484847
chr7:128620705(-) A-G intron -    22484847
chr7:128620708(-) A-G intron -    22484847
chr7:128621979(-) A-G intron -    22484847
chr7:128622033(-) A-G intron -    22484847
chr7:128622062(-) A-G intron -    22484847
chr7:128623354(-) T-C intron -    22484847
chr7:128627731(-) A-G intron -    22484847
chr7:128627732(-) A-G intron -    22484847
chr7:128627751(-) A-G intron -    22484847
chr7:128627752(-) T-C intron -    22484847
chr7:128627759(-) A-G intron -    22484847
chr7:128627763(-) A-G intron -    22484847
chr7:128628231(-) A-G intron -    22484847
chr7:128628912(-) A-G intron -    22484847
chr7:128629031(-) A-G intron -    22484847
chr7:128629048(-) A-G intron -    22484847
chr7:128629049(-) A-G intron -    22484847
chr7:128629055(-) A-G intron -    22484847
chr7:128629062(-) A-G intron -    22484847
chr7:128629125(-) A-G intron -    22484847
chr7:128634349(-) A-G intron -    22484847
chr7:128634408(-) A-G intron -    22484847
chr7:128634415(-) A-G intron -    22484847
chr7:128634416(-) A-G intron -    22484847
chr7:128635786(-) A-G intron -    22484847
chr7:128636608(-) A-G intron -    22484847
chr7:128636649(-) A-G intron -    22484847
chr7:128636675(-) A-G intron -    22484847
chr7:128636685(-) A-G intron -    22484847
chr7:128638362(-) A-G intron -    22484847
chr7:128638380(-) A-G intron -    22484847
chr7:128638466(-) A-G intron -    22484847
chr7:128638529(-) A-G intron -    22484847
chr7:128638558(-) A-G intron -    22484847
chr7:128639045(-) A-G intron -    22484847
chr7:128648079(-) A-G intron -    22484847
chr7:128648081(-) A-G intron -    22484847
chr7:128648091(-) A-G intron -    22484847
chr7:128648120(-) A-G intron -    22484847
chr7:128648127(-) A-G intron -    22484847
chr7:128648140(-) A-G intron -    22484847
chr7:128648141(-) A-G intron -    22484847
chr7:128648151(-) A-G intron -    22484847
chr7:128648197(-) A-G intron -    22484847
chr7:128648201(-) A-G intron -    22484847
chr7:128648202(-) T-G intron -    22484847
chr7:128648336(-) A-G intron -    22484847
chr7:128650345(-) A-G intron -    22484847
chr7:128650360(-) A-G intron -    22484847
chr7:128651514(-) A-G intron -    22484847
chr7:128651562(-) A-G intron -    22484847
chr7:128654378(-) C-T intron -    22484847
chr7:128654455(-) A-G intron -    22484847
chr7:128654525(-) A-G intron -    22484847
chr7:128659934(-) A-G intron -    22484847
chr7:128660034(-) A-G intron -    22484847
chr7:128660139(-) A-G intron -    22484847
chr7:128660632(-) A-G intron -    22484847
chr7:128660677(-) A-G intron -    22484847
chr7:128660781(-) A-G intron -    22484847
chr7:128660790(-) A-G intron -    22484847
chr7:128661175(-) A-G intron -    22484847
chr7:128662218(-) A-G intron -    22484847
chr7:128662236(-) A-G intron -    22484847
chr7:128662323(-) A-G intron -    22484847
chr7:128665712(-) A-G intron -    22484847
chr7:128665746(-) A-G intron -    22484847
chr7:128665935(-) A-G intron -    22484847
chr7:128665954(-) A-G intron -    22484847
chr7:128666080(-) A-G intron -    22484847
chr7:128666621(-) A-G intron -    22484847
chr7:128666639(-) A-G intron -    22484847
chr7:128666730(-) A-G intron -    22484847
chr7:128666944(-) A-G intron -    22484847
chr7:128667397(-) A-G intron -    22484847
chr7:128667418(-) A-G intron -    22484847
chr7:128667427(-) A-G intron -    22484847
chr7:128667430(-) A-G intron -    22484847
chr7:128667452(-) A-G intron -    22484847
chr7:128667515(-) A-G intron -    22484847
chr7:128671973(-) A-G intron -    22484847
chr7:128671974(-) A-G intron -    22484847
chr7:128672013(-) A-G intron -    22484847
chr7:128672036(-) A-G intron -    22484847
chr7:128673884(-) A-G intron -    22484847
chr7:128674340(-) A-G intron -    22484847
chr7:128674354(-) A-G intron -    22484847
chr7:128674357(-) A-G intron -    22484847
chr7:128674365(-) A-G intron -    22484847
chr7:128675079(-) T-C intron -    22484847
chr7:128675139(-) A-G intron -    22484847
chr7:128675406(-) A-G intron -    22484847
chr7:128675422(-) A-G intron -    22484847
chr7:128675446(-) A-G intron -    22484847
chr7:128675542(-) A-G intron -    22484847
chr7:128676040(-) A-G intron -    22484847
chr7:128676086(-) A-G intron -    22484847
chr7:128676140(-) A-G intron -    22484847
chr7:128676146(-) A-G intron -    22484847
chr7:128676156(-) A-G intron -    22484847
chr7:128676279(-) A-G intron -    22484847
chr7:128676280(-) A-G intron -    22484847
chr7:128676282(-) A-G intron -    22484847
chr7:128676363(-) A-G intron -    22484847
chr7:128676395(-) A-G intron -    22484847
chr7:128676409(-) A-G intron -    22484847
chr7:128679395(-) G-A intron -    22484847
chr7:128681402(-) A-G intron -    22484847
chr7:128690273(-) A-G intron -    22484847
chr7:128691530(-) A-G intron -    22484847
chr7:128691538(-) A-G intron -    22484847
chr7:128691590(-) A-G intron -    22484847
chr7:128691836(-) A-G intron -    22484847
chr7:128691842(-) A-G intron -    22484847
chr7:128691893(-) A-G intron -    22484847
chr7:128691901(-) A-G intron -    22484847
chr7:128693255(-) A-G intron -    22484847
chr7:128693296(-) A-G intron -    22484847
chr7:128693384(-) C-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TNPO3
chr7:128595007-128595008(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595023-128595024(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595031-128595032(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595112-128595113(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595118-128595119(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595124-128595125(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595130-128595131(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595135-128595136(-) m6A 3'UTR       24284625//24981863//28052920//27773535//27371828//22608085
chr7:128595188-128595189(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr7:128595314-128595315(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085
chr7:128595324-128595325(-) m6A 3'UTR       25456834//24981863//27773535//27371828//22608085
chr7:128595374-128595375(-) m6A 3'UTR       25456834//27371828
chr7:128658035-128658036(-) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr7:128658044-128658045(-) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr7:128658068-128658069(-) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr7:128658089-128658090(-) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr7:128658114-128658115(-) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr7:128658135-128658136(-) m6A 5'UTR//CDS       24284625//24981863//22575960//22608085
chr7:128658188-128658189(-) m6A 5'UTR//CDS       24284625//27773535
chr7:128694909-128694910(-) m6A 5'UTR       24284625//25456834//24981863//26404942//27773535//27371828//27773536
chr7:128695025-128695026(-) m6A 5'UTR       24284625//24981863//27773535//27371828//22608085
chr7:128695044-128695045(-) m6A 5'UTR       24284625//24981863//27773535//27371828//22608085
chr7:128695072-128695073(-) m6A 5'UTR       24284625//24981863//27773535//27371828//22608085
chr7:128695158-128695159(-) m6A 5'UTR       24284625//24981863//27773535//27371828//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-1276
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
TNPO3
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-1276
Interactor2: TNPO3

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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