Detail Information

Basic Information:


  VIRBase ID:  

HHID00070336

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-548n:           UBE4A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-548n UBE4A
miRBase
Accession/Entrez ID
MIMAT0005916 9354
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - E4//UBOX2//UFD2

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-548n
rs1167799411 chr7:34940804    A/G
rs1349024540 chr7:34940825    G/C
rs1440338026 chr7:34940814    C/G
rs1440338026 chr7:34940814    C/T
rs1014154255 chr7:34940819    A/G
rs1170899735 chr7:34940820    C/T
rs541369935 chr7:34940820    CT/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UBE4A
chr11:118286230(+) A-I      intronic
chr11:118286245(+) A-I      intronic
chr11:118286247(+) A-I      intronic
chr11:118284518(+) A-I      intronic
chr11:118284553(+) A-I      intronic
chr11:118722264(+) A-I      intronic
chr11:118244669(+) A-I      intronic
chr11:118286248(+) A-I      intronic
chr11:118286259(+) A-I      intronic
chr11:118722257(+) A-I      intronic
chr11:118722255(+) A-I      intronic
chr11:118244708(+) A-I      intronic
chr11:118284483(+) A-I      intronic
chr11:118423326(+) A-I      intronic
chr11:118423322(+) A-I      intronic
chr11:118423321(+) A-I      intronic
chr11:118423306(+) A-I      intronic
chr11:118423288(+) A-I      intronic
chr11:118422239(+) A-I      intronic
chr11:118422235(+) A-I      intronic
chr11:118422211(+) A-I      intronic
chr11:118658810(+) A-I      intronic
chr11:118658805(+) A-I      intronic
chr11:118658786(+) A-I      intronic
chr11:118658771(+) A-I      intronic
chr11:118422207(+) A-I      intronic
chr11:118422205(+) A-I      intronic
chr11:118422179(+) A-I      intronic
chr11:118421958(+) A-I      intronic
chr11:118421950(+) A-I      intronic
chr11:118658765(+) A-I      intronic
chr11:118658764(+) A-I      intronic
chr11:118658751(+) A-I      intronic
chr11:118286267(+) A-I      intronic
chr11:118286272(+) A-I      intronic
chr11:118421939(+) A-I      intronic
chr11:118421934(+) A-I      intronic
chr11:118430899(+) A-I      intronic
chr11:118421933(+) A-I      intronic
chr11:118421932(+) A-I      intronic
chr11:118421927(+) A-I      intronic
chr11:118421910(+) A-I      intronic
chr11:118421909(+) A-I      intronic
chr11:118287595(+) A-I      intronic
chr11:118287603(+) A-I      intronic
chr11:118287604(+) A-I      intronic
chr11:118287605(+) A-I      intronic
chr11:118287624(+) A-I      intronic
chr11:118287630(+) A-I      intronic
chr11:118287631(+) A-I      intronic
chr11:118287632(+) A-I      intronic
chr11:118287633(+) A-I      intronic
chr11:118287643(+) A-I      intronic
chr11:118421819(+) A-I      intronic
chr11:118431363(+) A-I      intronic
chr11:118431375(+) A-I      intronic
chr11:118431383(+) A-I      intronic
chr11:118431402(+) A-I      intronic
chr11:118431404(+) A-I      intronic
chr11:118431414(+) A-I      intronic
chr11:118431417(+) A-I      intronic
chr11:118421886(+) A-I      intronic
chr11:118537981(+) A-I      intronic
chr11:118537957(+) A-I      intronic
chr11:118537952(+) A-I      intronic
chr11:118431426(+) A-I      intronic
chr11:118537951(+) A-I      intronic
chr11:118431429(+) A-I      intronic
chr11:118431430(+) A-I      intronic
chr11:118537939(+) A-I      intronic
chr11:118231944(+) A-I      intronic
chr11:118432613(+) A-I      intronic
chr11:118432612(+) A-I      intronic
chr11:118421881(+) A-I      intronic
chr11:118421872(+) A-I      intronic
chr11:118430879(+) A-I      intronic
chr11:118430872(+) A-I      intronic
chr11:118430870(+) A-I      intronic
chr11:118429488(+) A-I      intronic
chr11:118429480(+) A-I      intronic
chr11:118429473(+) A-I      intronic
chr11:118429472(+) A-I      intronic
chr11:118429469(+) A-I      intronic
chr11:118429455(+) A-I      intronic
chr11:118429452(+) A-I      intronic
chr11:118429445(+) A-I      intronic
chr11:118429444(+) A-I      intronic
chr11:118427308(+) A-I      intronic
chr11:118427307(+) A-I      intronic
chr11:118427306(+) A-I      intronic
chr11:118427298(+) A-I      intronic
chr11:118427293(+) A-I      intronic
chr11:118427284(+) A-I      intronic
chr11:118427281(+) A-I      intronic
chr11:118424982(+) A-I      intronic
chr11:118424977(+) A-I      intronic
chr11:118424969(+) A-I      intronic
chr11:118424952(+) A-I      intronic
chr11:118424161(+) A-I      intronic
chr11:118424160(+) A-I      intronic
chr11:118421854(+) A-I      intronic
chr11:118421853(+) A-I      intronic
chr11:118419897(+) A-I      intronic
chr11:118419888(+) A-I      intronic
chr11:118424147(+) A-I      intronic
chr11:118424146(+) A-I      intronic
chr11:118431434(+) A-I      intronic
chr11:118424145(+) A-I      intronic
chr11:118424135(+) A-I      intronic
chr11:118423545(+) A-I      intronic
chr11:118423524(+) A-I      intronic
chr11:118423511(+) A-I      intronic
chr11:118423494(+) A-I      intronic
chr11:118423488(+) A-I      intronic
chr11:118423483(+) A-I      intronic
chr11:118423449(+) A-I      intronic
chr11:118423433(+) A-I      intronic
chr11:118423423(+) A-I      intronic
chr11:118419876(+) A-I      intronic
chr11:118264380(+) A-I      intronic
chr11:118264513(+) A-I      intronic
chr11:118423348(+) A-I      intronic
chr11:118423347(+) A-I      intronic
chr11:118423346(+) A-I      intronic
chr11:118420750(+) A-I      intronic
chr11:118431447(+) A-I      intronic
chr11:118603429(+) A-I      intronic
chr11:118419875(+) A-I      intronic
chr11:118419861(+) A-I      intronic
chr11:118419836(+) A-I      intronic
chr11:118418317(+) A-I      intronic
chr11:118418316(+) A-I      intronic
chr11:118418299(+) A-I      intronic
chr11:118418289(+) A-I      intronic
chr11:118418251(+) A-I      intronic
chr11:118418234(+) A-I      intronic
chr11:118418233(+) A-I      intronic
chr11:118722300(+) A-I      intronic
chr11:118722296(+) A-I      intronic
chr11:118722291(+) A-I      intronic
chr11:118722290(+) A-I      intronic
chr11:118722280(+) A-I      intronic
chr11:118722272(+) A-I      intronic
chr11:118422397(+) A-I      intronic
chr11:118422399(+) A-I      intronic
chr11:118671352(+) A-I      intronic
chr11:118537648(+) A-I      intronic
chr11:118537653(+) A-I      intronic
chr11:118423539(+) A-I      intronic
chr11:118423596(+) A-I      intronic
chr11:118294561(+) A-I      intronic
chr11:118294492(+) A-I      intronic
chr11:118432592(+) A-I      intronic
chr11:118248167(+) A-I      intronic
chr11:118666945(+) A-I      intronic
chr11:118539253(+) A-I      intronic
chr11:118539214(+) A-I      intronic
chr11:118539087(+) A-I      intronic
chr11:118664948(+) A-I      intronic
chr11:118538782(+) A-I      intronic
chr11:118234037(+) A-I      intronic
chr11:118234047(+) A-I      intronic
chr11:118423603(+) A-I      intronic
chr11:118234073(+) A-I      intronic
chr11:118671356(+) A-I      intronic
chr11:118538762(+) A-I      intronic
chr11:118538758(+) A-I      intronic
chr11:118234431(+) A-I      intronic
chr11:118234562(+) A-I      intronic
chr11:118678426(+) A-I      intronic
chr11:118423605(+) A-I      intronic
chr11:118699138(+) A-I      intronic
chr11:118709609(+) A-I      intronic
chr11:118423664(+) A-I      intronic
chr11:118423673(+) A-I      intronic
chr11:118231955(+) A-I      intronic
chr11:118549939(+) A-I      intronic
chr11:118538753(+) A-I      intronic
chr11:118234567(+) A-I      intronic
chr11:118581005(+) A-I      intronic
chr11:118237732(+) A-I      intronic
chr11:118423749(+) A-I      intronic
chr11:118246118(+) A-I      intronic
chr11:118581846(+) A-I      intronic
chr11:118681191(+) A-I      intronic
chr11:118539394(+) A-I      intronic
chr11:118244636(+) A-I      intronic
chr11:118682564(+) A-I      intronic
chr11:118300879(+) A-I      intronic
chr11:118248185(+) A-I      intronic
chr11:118423754(+) A-I      intronic
chr11:118285705(+) A-I      intronic
chr11:118248432(+) A-I      intronic
chr11:118537600(+) A-I      intronic
chr11:118423776(+) A-I      intronic
chr11:118700717(+) A-I      intronic
chr11:118293446(+) A-I      intronic
chr11:118432582(+) A-I      intronic
chr11:118536932(+) A-I      intronic
chr11:118424105(+) A-I      intronic
chr11:118301488(+) A-I      intronic
chr11:118263876(+) A-I      intronic
chr11:118238356(+) A-I      intronic
chr11:118424106(+) A-I      intronic
chr11:118539393(+) A-I      intronic
chr11:118263903(+) A-I      intronic
chr11:118422391(+) A-I      intronic
chr11:118583029(+) A-I      intronic
chr11:118284945(+) A-I      intronic
chr11:118263912(+) A-I      intronic
chr11:118294718(+) A-I      intronic
chr11:118424111(+) A-I      intronic
chr11:118426375(+) A-I      intronic
chr11:118426381(+) A-I      intronic
chr11:118426382(+) A-I      intronic
chr11:118426387(+) A-I      intronic
chr11:118234542(+) A-I      intronic
chr11:118730476(+) A-I      intronic
chr11:118420379(+) A-I      intronic
chr11:118426398(+) A-I      intronic
chr11:118420340(+) A-I      intronic
chr11:118265230(+) A-I      intronic
chr11:118429857(+) A-I      intronic
chr11:118420339(+) A-I      intronic
chr11:118244588(+) A-I      intronic
chr11:118426523(+) A-I      intronic
chr11:118420333(+) A-I      intronic
chr11:118672424(+) A-I      intronic
chr11:118244731(+) A-I      intronic
chr11:118420320(+) A-I      intronic
chr11:118420381(+) A-I      intronic
chr11:118420423(+) A-I      intronic
chr11:118420304(+) A-I      intronic
chr11:118420437(+) A-I      intronic
chr11:118426527(+) A-I      intronic
chr11:118420018(+) A-I      intronic
chr11:118420008(+) A-I      intronic
chr11:118426621(+) A-I      intronic
chr11:118248548(+) A-I      intronic
chr11:118708783(+) A-I      intronic
chr11:118420500(+) A-I      intronic
chr11:118420003(+) A-I      intronic
chr11:118419940(+) A-I      intronic
chr11:118536883(+) A-I      intronic
chr11:118419558(+) A-I      intronic
chr11:118263967(+) A-I      intronic
chr11:118420675(+) A-I      intronic
chr11:118420703(+) A-I      intronic
chr11:118420775(+) A-I      intronic
chr11:118419556(+) A-I      intronic
chr11:118420779(+) A-I      intronic
chr11:118285660(+) A-I      intronic
chr11:118421225(+) A-I      intronic
chr11:118419545(+) A-I      intronic
chr11:118421227(+) A-I      intronic
chr11:118421891(+) A-I      intronic
chr11:118419398(+) A-I      intronic
chr11:118296458(+) A-I      intronic
chr11:118264064(+) A-I      intronic
chr11:118264074(+) A-I      intronic
chr11:118538145(+) A-I      intronic
chr11:118426622(+) A-I      intronic
chr11:118264546(+) A-I      intronic
chr11:118419384(+) A-I      intronic
chr11:118537992(+) A-I      intronic
chr11:118426761(+) A-I      intronic
chr11:118264558(+) A-I      intronic
chr11:118581859(+) A-I      intronic
chr11:118421911(+) A-I      intronic
chr11:118426769(+) A-I      intronic
chr11:118426788(+) A-I      intronic
chr11:118426807(+) A-I      intronic
chr11:118426837(+) A-I      intronic
chr11:118264895(+) A-I      intronic
chr11:118536844(+) A-I      intronic
chr11:118426838(+) A-I      intronic
chr11:118421926(+) A-I      intronic
chr11:118265254(+) A-I      intronic
chr11:118419309(+) A-I      intronic
chr11:118265287(+) A-I      intronic
chr11:118421968(+) A-I      intronic
chr11:118426855(+) A-I      intronic
chr11:118247942(+) A-I      intronic
chr11:118426883(+) A-I      intronic
chr11:118421969(+) A-I      intronic
chr11:118248831(+) A-I      intronic
chr11:118426935(+) A-I      intronic
chr11:118265860(+) A-I      intronic
chr11:118426957(+) A-I      intronic
chr11:118427149(+) A-I      intronic
chr11:118266532(+) A-I      intronic
chr11:118427163(+) A-I      intronic
chr11:118290778(+) A-I      intronic
chr11:118582394(+) A-I      intronic
chr11:118427274(+) A-I      intronic
chr11:118427314(+) A-I      intronic
chr11:118266533(+) A-I      intronic
chr11:118237830(+) A-I      intronic
chr11:118290081(+) A-I      intronic
chr11:118265368(+) A-I      intronic
chr11:118421978(+) A-I      intronic
chr11:118290080(+) A-I      intronic
chr11:118427320(+) A-I      intronic
chr11:118537661(+) A-I      intronic
chr11:118266556(+) A-I      intronic
chr11:118429757(+) A-I      intronic
chr11:118429766(+) A-I      intronic
chr11:118264203(+) A-I      intronic
chr11:118422016(+) A-I      intronic
chr11:118302504(+) A-I      intronic
chr11:118265097(+) A-I      intronic
chr11:118422033(+) A-I      intronic
chr11:118422040(+) A-I      intronic
chr11:118422043(+) A-I      intronic
chr11:118422070(+) A-I      intronic
chr11:118422203(+) A-I      intronic
chr11:118422206(+) A-I      intronic
chr11:118422210(+) A-I      intronic
chr11:118422227(+) A-I      intronic
chr11:118422230(+) A-I      intronic
chr11:118422237(+) A-I      intronic
chr11:118422238(+) A-I      intronic
chr11:118535642(+) A-I      intronic
chr11:118419280(+) A-I      intronic
chr11:118419160(+) A-I      intronic
chr11:118281716(+) A-I      intronic
chr11:118422374(+) A-I      intronic
chr11:118582340(+) A-I      intronic
chr11:118422304(+) A-I      intronic
chr11:118582540(+) A-I      intronic
chr11:118582541(+) A-I      intronic
chr11:118422309(+) A-I      intronic
chr11:118583028(+) A-I      intronic
chr11:118583907(+) A-I      intronic
chr11:118434927(+) A-I      intronic
chr11:118433769(+) A-I      intronic
chr11:118248865(+) A-I      intronic
chr11:118433730(+) A-I      intronic
chr11:118584652(+) A-I      intronic
chr11:118433676(+) A-I      intronic
chr11:118433673(+) A-I      intronic
chr11:118429803(+) A-I      intronic
chr11:118611456(+) A-I      intronic
chr11:118433669(+) A-I      intronic
chr11:118281945(+) A-I      intronic
chr11:118429845(+) A-I      intronic
chr11:118433666(+) A-I      intronic
chr11:118433564(+) A-I      intronic
chr11:118419133(+) A-I      intronic
chr11:118574903(+) A-I      intronic
chr11:118433561(+) A-I      intronic
chr11:118433525(+) A-I      intronic
chr11:118668510(+) A-I      intronic
chr11:118282600(+) A-I      intronic
chr11:118536735(+) A-I      intronic
chr11:118284531(+) A-I      intronic
chr11:118433101(+) A-I      intronic
chr11:118433100(+) A-I      intronic
chr11:118418872(+) A-I      intronic
chr11:118418859(+) A-I      intronic
chr11:118433080(+) A-I      intronic
chr11:118433075(+) A-I      intronic
chr11:118290621(+) A-I      intronic
chr11:118418850(+) A-I      intronic
chr11:118433058(+) A-I      intronic
chr11:118432670(+) A-I      intronic
chr11:118292413(+) A-I      intronic
chr11:118432644(+) A-I      intronic
chr11:118292421(+) A-I      intronic
chr11:118432625(+) A-I      intronic
chr11:118265065(+) A-I      intronic
chr11:118432599(+) A-I      intronic
chr11:118432598(+) A-I      intronic
chr11:118265631(+) A-I      intronic
chr11:118293849(+) A-I      intronic
chr11:118422321(+) A-I      intronic
chr11:118295305(+) A-I      intronic
chr11:118666084(+) A-I      intronic
chr11:118418807(+) A-I      intronic
chr11:118538677(+) A-I      intronic
chr11:118536807(+) A-I      intronic
chr11:118538674(+) A-I      intronic
chr11:118422330(+) A-I      intronic
chr11:118300525(+) A-I      intronic
chr11:118418275(+) A-I      intronic
chr11:118721329(+) A-I      intronic
chr11:118422334(+) A-I      intronic
chr11:118418273(+) A-I      intronic
chr11:118422344(+) A-I      intronic
chr11:118418238(+) A-I      intronic
chr11:118422368(+) A-I      intronic
chr11:118538673(+) A-I      intronic
chr11:118266511(+) A-I      intronic
chr11:118422373(+) A-I      intronic
chr11:118418237(+) A-I      intronic
chr11:118300545(+) A-I      intronic
chr11:118668284(+) A-I      intronic
chr11:118293555(+) A-I      intronic
chr11:118264053(+) A-I      intronic
chr11:118302816(+) A-I      intronic
chr11:118265842(+) A-I      intronic
chr11:118246335(+) A-I      intronic
chr11:118429822(+) A-I      intronic
chr11:118543341(+) A-I      intronic
chr11:118580922(+) A-I      intronic
chr11:118264188(+) A-I      intronic
chr11:118543364(+) A-I      intronic
chr11:118691105(+) A-I      intronic
chr11:118672426(+) A-I      intronic
chr11:118664865(+) A-I      intronic
chr11:118664910(+) A-I      intronic
chr11:118665028(+) A-I      intronic
chr11:118244553(+) A-I      intronic
chr11:118300776(+) A-I      intronic
chr11:118665037(+) A-I      intronic
chr11:118300521(+) A-I      intronic
chr11:118580894(+) A-I      intronic
chr11:118300428(+) A-I      intronic
chr11:118284606(+) A-I      intronic
chr11:118665119(+) A-I      intronic
chr11:118665166(+) A-I      intronic
chr11:118295282(+) A-I      intronic
chr11:118666762(+) A-I      intronic
chr11:118666818(+) A-I      intronic
chr11:118666834(+) A-I      intronic
chr11:118666844(+) A-I      intronic
chr11:118666969(+) A-I      intronic
chr11:118668378(+) A-I      intronic
chr11:118668566(+) A-I      intronic
chr11:118244566(+) A-I      intronic
chr11:118671257(+) A-I      intronic
chr11:118295393(+) A-I      intronic
chr11:118283098(+) A-I      intronic
chr11:118422390(+) A-I      intronic
chr11:118422394(+) A-I      intronic
chr11:118422395(+) A-I      intronic
chr11:118293630(+) A-I      intronic
chr11:118570910(+) A-I      intronic
chr11:118244627(+) A-I      intronic
chr11:118299611(+) A-I      intronic
chr11:118290759(+) A-I      intronic
chr11:118285717(+) A-I      intronic
chr11:118234593(+) A-I      intronic
chr11:118680100(+) A-I      intronic
chr11:118283336(+) A-I      intronic
chr11:118248868(+) A-I      intronic
chr11:118299251(+) A-I      intronic
chr11:118299299(+) A-I      intronic
chr11:118293001(+) A-I      intronic
chr11:118264563(+) A-I      intronic
chr11:118265151(+) A-I      intronic
chr11:118290848(+) A-I      intronic
chr11:118293894(+) A-I      intronic
chr11:118284669(+) A-I      intronic
chr11:118299558(+) A-I      intronic
chr11:118237821(+) A-I      intronic
chr11:118293895(+) A-I      intronic
chr11:118246348(+) A-I      intronic
chr11:118285723(+) A-I      intronic
chr11:118264971(+) A-I      intronic
chr11:118421858(+) A-I      intronic
chr11:118237827(+) A-I      intronic
chr11:118264940(+) A-I      intronic
chr11:118264926(+) A-I      intronic
chr11:118265438(+) A-I      intronic
chr11:118581286(+) A-I      intronic
chr11:118248770(+) A-I      intronic
chr11:118720135(+) A-I      intronic
chr11:118282599(+) A-I      intronic
chr11:118439435(+) A-I      intronic
chr11:118668278(+) A-I      intronic
chr11:118244673(+) A-I      intronic
chr11:118232011(+) A-I      intronic
chr11:118266669(+) A-I      intronic
chr11:118299517(+) A-I      intronic
chr11:118237817(+) A-I      intronic
chr11:118300556(+) A-I      intronic
chr11:118265002(+) A-I      intronic
chr11:118290074(+) A-I      intronic
chr11:118282863(+) A-I      intronic
chr11:118282997(+) A-I      intronic
chr11:118296395(+) A-I      intronic
chr11:118290691(+) A-I      intronic
chr11:118281939(+) A-I      intronic
chr11:118299377(+) A-I      intronic
chr11:118299587(+) A-I      intronic
chr11:118719751(+) A-I      intronic
chr11:118668558(+) A-I      intronic
chr11:118264932(+) A-I      intronic
chr11:118302731(+) A-I      intronic
chr11:118265091(+) A-I      intronic
chr11:118284672(+) A-I      intronic
chr11:118695364(+) A-I      intronic
chr11:118244773(+) A-I      intronic
chr11:118285585(+) A-I      intronic
chr11:118426531(+) A-I      intronic
chr11:118285786(+) A-I      intronic
chr11:118739541(+) A-I      intronic
chr11:118264501(+) A-I      intronic
chr11:118283002(+) A-I      intronic
chr11:118264428(+) A-I      intronic
chr11:118295411(+) A-I      intronic
chr11:118244744(+) A-I      intronic
chr11:118264021(+) A-I      intronic
chr11:118244670(+) A-I      intronic
chr11:118293668(+) A-I      intronic
chr11:118263985(+) A-I      intronic
chr11:118248882(+) A-I      intronic
chr11:118259217(+) A-I      intronic
chr11:118261624(+) A-I      intronic
chr11:118283099(+) A-I      intronic
chr11:118290544(+) A-I      intronic
chr11:118669079(+) A-I      intronic
chr11:118248062(+) A-I      intronic
chr11:118237910(+) A-I      intronic
chr11:118285794(+) A-I      intronic
chr11:118691093(+) A-I      intronic
chr11:118300869(+) A-I      intronic
chr11:118301149(+) A-I      intronic
chr11:118264126(+) A-I      intronic
chr11:118246094(+) A-I      intronic
chr11:118248507(+) A-I      intronic
chr11:118294731(+) A-I      intronic
chr11:118264438(+) A-I      intronic
chr11:118284598(+) A-I      intronic
chr11:118284465(+) A-I      intronic
chr11:118265124(+) A-I      intronic
chr11:118718022(+) A-I      intronic
chr11:118302783(+) A-I      intronic
chr11:118234516(+) A-I      intronic
chr11:118281554(+) A-I      intronic
chr11:118244770(+) A-I      intronic
chr11:118293300(+) A-I      intronic
chr11:118299563(+) A-I      intronic
chr11:118569969(+) A-I      intronic
chr11:118300929(+) A-I      intronic
chr11:118234388(+) A-I      intronic
chr11:118284535(+) A-I      intronic
chr11:118291538(+) A-I      intronic
chr11:118246179(+) A-I      intronic
chr11:118248133(+) A-I      intronic
chr11:118265579(+) A-I      intronic
chr11:118299168(+) A-I      intronic
chr11:118248612(+) A-I      intronic
chr11:118739543(+) A-I      intronic
chr11:118672059(+) A-I      intronic
chr11:118552150(+) A-I      intronic
chr11:118234585(+) A-I      intronic
chr11:118264323(+) A-I      intronic
chr11:118282619(+) A-I      intronic
chr11:118668084(+) A-I      intronic
chr11:118293350(+) A-I      intronic
chr11:118247496(+) A-I      intronic
chr11:118290765(+) A-I      intronic
chr11:118244666(+) A-I      intronic
chr11:118685528(+) A-I      intronic
chr11:118290783(+) A-I      intronic
chr11:118265369(+) A-I      intronic
chr11:118293869(+) A-I      intronic
chr11:118285688(+) A-I      intronic
chr11:118264038(+) A-I      intronic
chr11:118299467(+) A-I      intronic
chr11:118694935(+) A-I      intronic
chr11:118683099(+) A-I      intronic
chr11:118721363(+) A-I      intronic
chr11:118668414(+) A-I      intronic
chr11:118265923(+) A-I      intronic
chr11:118285028(+) A-I      intronic
chr11:118284581(+) A-I      intronic
chr11:118281779(+) A-I      intronic
chr11:118678228(+) A-I      intronic
chr11:118300449(+) A-I      intronic
chr11:118301535(+) A-I      intronic
chr11:118247976(+) A-I      intronic
chr11:118266504(+) A-I      intronic
chr11:118265565(+) A-I      intronic
chr11:118294509(+) A-I      intronic
chr11:118695363(+) A-I      intronic
chr11:118300411(+) A-I      intronic
chr11:118671574(+) A-I      intronic
chr11:118685582(+) A-I      intronic
chr11:118242973(+) A-I      intronic
chr11:118666711(+) A-I      intronic
chr11:118301534(+) A-I      intronic
chr11:118668415(+) A-I      intronic
chr11:118284473(+) A-I      intronic
chr11:118299245(+) A-I      intronic
chr11:118292412(+) A-I      intronic
chr11:118584057(+) A-I      intronic
chr11:118299198(+) A-I      intronic
chr11:118581530(+) A-I      intronic
chr11:118703240(+) A-I      intronic
chr11:118734754(+) A-I      intronic
chr11:118685575(+) A-I      intronic
chr11:118668536(+) A-I      intronic
chr11:118295349(+) A-I      intronic
chr11:118552181(+) A-I      intronic
chr11:118263877(+) A-I      intronic
chr11:118265231(+) A-I      intronic
chr11:118303750(+) A-I      intronic
chr11:118247585(+) A-I      intronic
chr11:118293964(+) A-I      intronic
chr11:118263982(+) A-I      intronic
chr11:118285056(+) A-I      intronic
chr11:118290087(+) A-I      intronic
chr11:118730488(+) A-I      intronic
chr11:118299561(+) A-I      intronic
chr11:118671410(+) A-I      intronic
chr11:118300887(+) A-I      intronic
chr11:118283509(+) A-I      intronic
chr11:118284545(+) A-I      intronic
chr11:118266670(+) A-I      intronic
chr11:118259618(+) A-I      intronic
chr11:118265082(+) A-I      intronic
chr11:118671407(+) A-I      intronic
chr11:118681057(+) A-I      intronic
chr11:118300927(+) A-I      intronic
chr11:118668526(+) A-I      intronic
chr11:118666981(+) A-I      intronic
chr11:118300781(+) A-I      intronic
chr11:118238321(+) A-I      intronic
chr11:118247532(+) A-I      intronic
chr11:118264494(+) A-I      intronic
chr11:118300519(+) A-I      intronic
chr11:118290790(+) A-I      intronic
chr11:118719429(+) A-I      intronic
chr11:118284965(+) A-I      intronic
chr11:118285753(+) A-I      intronic
chr11:118233999(+) A-I      intronic
chr11:118238320(+) A-I      intronic
chr11:118263953(+) A-I      intronic
chr11:118290757(+) A-I      intronic
chr11:118284533(+) A-I      intronic
chr11:118684063(+) A-I      intronic
chr11:118286307(+) A-I      intronic
chr11:118284657(+) A-I      intronic
chr11:118266738(+) A-I      intronic
chr11:118570928(+) A-I      intronic
chr11:118293943(+) A-I      intronic
chr11:118299261(+) A-I      intronic
chr11:118248002(+) A-I      intronic
chr11:118668459(+) A-I      intronic
chr11:118265933(+) A-I      intronic
chr11:118610128(+) A-I      intronic
chr11:118681044(+) A-I      intronic
chr11:118615559(+) A-I      intronic
chr11:118666091(+) A-I      intronic
chr11:118259339(+) A-I      intronic
chr11:118238420(+) A-I      intronic
chr11:118681043(+) A-I      intronic
chr11:118247984(+) A-I      intronic
chr11:118299486(+) A-I      intronic
chr11:118707930(+) A-I      intronic
chr11:118233116(+) A-I      intronic
chr11:118301485(+) A-I      intronic
chr11:118285593(+) A-I      intronic
chr11:118293600(+) A-I      intronic
chr11:118717991(+) A-I      intronic
chr11:118252459(+) A-I      intronic
chr11:118697085(+) A-I      intronic
chr11:118677871(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED UBE4A
chr11:118265438(+) A-I intron -    22327324
chr11:118234585(+) A-I intron -    21960545
chr11:118244553(+) A-G intron -    22484847
chr11:118244666(+) A-G intron -    22484847
chr11:118244670(+) A-G intron -    22484847
chr11:118244731(+) A-G intron -    22484847
chr11:118244744(+) A-G intron -    22484847
chr11:118244770(+) A-G intron -    22484847
chr11:118246094(+) A-G intron -    22484847
chr11:118246335(+) A-G intron -    22484847
chr11:118262483(+) T-G intron -    22484847
chr11:118264563(+) A-G intron -    22484847
chr11:118265438(+) A-G intron -    22484847
chr11:118266669(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBE4A
chr11:118253330-118253331(+) m6A CDS       -
chr11:118253373-118253374(+) m6A CDS       -
chr11:118253476-118253477(+) m6A CDS       -
chr11:118255352-118255353(+) m6A CDS       -
chr11:118255368-118255369(+) m6A CDS       -
chr11:118263598-118263599(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118267035-118267036(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118267069-118267070(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118267084-118267085(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118267091-118267092(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118267130-118267131(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118267164-118267165(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr11:118267173-118267174(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr11:118267179-118267180(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr11:118267201-118267202(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr11:118267293-118267294(+) m6A 3'UTR       24981863
chr11:118269774-118269775(+) m6A 3'UTR       27773535
chr11:118269782-118269783(+) m6A 3'UTR       27773535
chr11:118269812-118269813(+) m6A 3'UTR       27773535
chr11:118269839-118269840(+) m6A 3'UTR       27773535
chr11:118269867-118269868(+) m6A 3'UTR       27773535
chr11:118269892-118269893(+) m6A 3'UTR       27773535
chr11:118269911-118269912(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-548n
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
UBE4A
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-548n
Interactor2: UBE4A

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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