Detail Information

Basic Information:


  VIRBase ID:  

HHID00068799

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-320b:           FNIP1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-320b FNIP1
miRBase
Accession/Entrez ID
MIMAT0005792 96459
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - -

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-320b
rs1156276707 chr1:116671796    G/T
rs1311857670 chr1:116671805    GCAAA/G
rs1373244526 chr1:116671806    C/T
rs1434535374 chr1:116671803    G/C
rs755613466 chr1:116671797    T/C
rs779451916 chr1:116671801    G/C
rs1303311077 chr1:224257059    A/T
rs1313950455 chr1:224257062    C/A
rs1333032274 chr1:224257051    G/T
rs1445839645 chr1:224257055    T/C
rs1465806287 chr1:224257050    TGCCC/T
rs745315768 chr1:224257052    C/T
rs769446888 chr1:224257054    C/T
rs1189118293 chr1:116671788    A/G
rs1199375375 chr1:116671794    G/A
rs1411861918 chr1:116671791    G/T
rs1469116635 chr1:116671792    C/CTGGGTTGAGAGGGCAAACAAATTAACTAAT
rs1030808536 chr1:224257064    A/T
rs774951709 chr1:224257069    T/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FNIP1
chr5:131022531(-) A-I      intronic
chr5:131022882(-) A-I      intronic
chr5:131022927(-) A-I      intronic
chr5:131130381(-) A-I      intronic
chr5:131129910(-) A-I      intronic
chr5:130994333(-) A-I      intronic
chr5:130994344(-) A-I      intronic
chr5:130994364(-) A-I      intronic
chr5:130994396(-) A-I      intronic
chr5:130994397(-) A-I      intronic
chr5:130994399(-) A-I      intronic
chr5:130994924(-) A-I      intronic
chr5:130994925(-) A-I      intronic
chr5:130994928(-) A-I      intronic
chr5:130994952(-) A-I      intronic
chr5:130994959(-) A-I      intronic
chr5:130994964(-) A-I      intronic
chr5:130994979(-) A-I      intronic
chr5:130994983(-) A-I      intronic
chr5:130994985(-) A-I      intronic
chr5:130994991(-) A-I      intronic
chr5:130994993(-) A-I      intronic
chr5:130995001(-) A-I      intronic
chr5:130995009(-) A-I      intronic
chr5:131129894(-) A-I      intronic
chr5:131129892(-) A-I      intronic
chr5:130994309(-) A-I      intronic
chr5:130994356(-) A-I      intronic
chr5:131129875(-) A-I      intronic
chr5:131129000(-) A-I      intronic
chr5:131128992(-) A-I      intronic
chr5:131128876(-) A-I      intronic
chr5:131126115(-) A-I      intronic
chr5:131126110(-) A-I      intronic
chr5:131118637(-) A-I      intronic
chr5:131118629(-) A-I      intronic
chr5:131118628(-) A-I      intronic
chr5:131118167(-) A-I      intronic
chr5:131118150(-) A-I      intronic
chr5:131118145(-) A-I      intronic
chr5:131113885(-) A-I      intronic
chr5:131113883(-) A-I      intronic
chr5:131113860(-) A-I      intronic
chr5:131113841(-) A-I      intronic
chr5:131112762(-) A-I      intronic
chr5:131112695(-) A-I      intronic
chr5:131129842(-) A-I      intronic
chr5:131124350(-) A-I      intronic
chr5:131124348(-) A-I      intronic
chr5:131124331(-) A-I      intronic
chr5:131124308(-) A-I      intronic
chr5:131124301(-) A-I      intronic
chr5:131086502(-) A-I      intronic
chr5:131086494(-) A-I      intronic
chr5:131086488(-) A-I      intronic
chr5:131086483(-) A-I      intronic
chr5:131086482(-) A-I      intronic
chr5:131022110(-) A-I      intronic
chr5:131018372(-) A-I      intronic
chr5:131018363(-) A-I      intronic
chr5:131018353(-) A-I      intronic
chr5:131000284(-) A-I      intronic
chr5:131000280(-) A-I      intronic
chr5:131000242(-) A-I      intronic
chr5:130987018(-) A-I      intronic
chr5:130987017(-) A-I      intronic
chr5:130987004(-) A-I      intronic
chr5:131111424(-) A-I      intronic
chr5:131103046(-) A-I      intronic
chr5:131101981(-) A-I      intronic
chr5:131101951(-) A-I      intronic
chr5:131100858(-) A-I      intronic
chr5:131100791(-) A-I      intronic
chr5:131100035(-) A-I      intronic
chr5:131088683(-) A-I      intronic
chr5:131088682(-) A-I      intronic
chr5:131088665(-) A-I      intronic
chr5:131088657(-) A-I      intronic
chr5:131088653(-) A-I      intronic
chr5:131022884(-) A-I      intronic
chr5:131087982(-) A-I      intronic
chr5:131087941(-) A-I      intronic
chr5:131099898(-) A-I      intronic
chr5:131099325(-) A-I      intronic
chr5:131087875(-) A-I      intronic
chr5:131087869(-) A-I      intronic
chr5:131087865(-) A-I      intronic
chr5:131085376(-) A-I      intronic
chr5:131085357(-) A-I      intronic
chr5:131085261(-) A-I      intronic
chr5:131085260(-) A-I      intronic
chr5:131085249(-) A-I      intronic
chr5:131085162(-) A-I      intronic
chr5:131084307(-) A-I      intronic
chr5:131084213(-) A-I      intronic
chr5:131075454(-) A-I      intronic
chr5:131075339(-) A-I      intronic
chr5:131037962(-) A-I      intronic
chr5:131074713(-) A-I      intronic
chr5:130989573(-) A-I      intronic
chr5:130989572(-) A-I      intronic
chr5:130989188(-) A-I      intronic
chr5:130988643(-) A-I      intronic
chr5:130988535(-) A-I      intronic
chr5:130988437(-) A-I      intronic
chr5:130988186(-) A-I      intronic
chr5:130988163(-) A-I      intronic
chr5:130988159(-) A-I      intronic
chr5:130988108(-) A-I      intronic
chr5:130986974(-) A-I      intronic
chr5:130983750(-) A-I      intronic
chr5:131074712(-) A-I      intronic
chr5:131074679(-) A-I      intronic
chr5:131074678(-) A-I      intronic
chr5:131074602(-) A-I      intronic
chr5:131074585(-) A-I      intronic
chr5:131074495(-) A-I      intronic
chr5:131074479(-) A-I      intronic
chr5:131065707(-) A-I      intronic
chr5:131065563(-) A-I      intronic
chr5:131065550(-) A-I      intronic
chr5:131058628(-) A-I      intronic
chr5:131058623(-) A-I      intronic
chr5:131057408(-) A-I      intronic
chr5:131051016(-) A-I      intronic
chr5:131050957(-) A-I      intronic
chr5:131050944(-) A-I      intronic
chr5:131047440(-) A-I      intronic
chr5:131047372(-) A-I      intronic
chr5:131035833(-) A-I      intronic
chr5:131035745(-) A-I      intronic
chr5:131035598(-) A-I      intronic
chr5:130989599(-) A-I      intronic
chr5:130989628(-) A-I      intronic
chr5:130989636(-) A-I      intronic
chr5:130991492(-) A-I      intronic
chr5:130991499(-) A-I      intronic
chr5:130991682(-) A-I      intronic
chr5:130992921(-) A-I      intronic
chr5:130993529(-) A-I      intronic
chr5:130993544(-) A-I      intronic
chr5:130998530(-) A-I      intronic
chr5:131035565(-) A-I      intronic
chr5:131035541(-) A-I      intronic
chr5:131035460(-) A-I      intronic
chr5:131035269(-) A-I      intronic
chr5:131035258(-) A-I      intronic
chr5:131035192(-) A-I      intronic
chr5:131035129(-) A-I      intronic
chr5:131033113(-) A-I      intronic
chr5:131033082(-) A-I      intronic
chr5:131033069(-) A-I      intronic
chr5:131030632(-) A-I      intronic
chr5:130998632(-) A-I      intronic
chr5:130998668(-) A-I      intronic
chr5:131000220(-) A-I      intronic
chr5:131001455(-) A-I      intronic
chr5:131001477(-) A-I      intronic
chr5:131001483(-) A-I      intronic
chr5:131003311(-) A-I      intronic
chr5:131008901(-) A-I      intronic
chr5:131011663(-) A-I      intronic
chr5:131012098(-) A-I      intronic
chr5:131012208(-) A-I      intronic
chr5:131012234(-) A-I      intronic
chr5:131012269(-) A-I      intronic
chr5:131030606(-) A-I      intronic
chr5:131025894(-) A-I      intronic
chr5:131025832(-) A-I      intronic
chr5:131025788(-) A-I      intronic
chr5:131025724(-) A-I      intronic
chr5:131012344(-) A-I      intronic
chr5:131012370(-) A-I      intronic
chr5:131018195(-) A-I      intronic
chr5:131018220(-) A-I      intronic
chr5:131018334(-) A-I      intronic
chr5:131018402(-) A-I      intronic
chr5:131020851(-) A-I      intronic
chr5:131021278(-) A-I      intronic
chr5:131021419(-) A-I      intronic
chr5:131021420(-) A-I      intronic
chr5:131025663(-) A-I      intronic
chr5:131023066(-) A-I      intronic
chr5:131023050(-) A-I      intronic
chr5:131023000(-) A-I      intronic
chr5:131081177(-) A-I      intronic
chr5:130978424(-) A-I      3'UTR
chr5:130978429(-) A-I      3'UTR
chr5:130978402(-) A-I      3'UTR
chr5:130978420(-) A-I      3'UTR
chr5:130983305(-) A-I      intronic
chr5:131129778(-) A-I      intronic
chr5:131109884(-) A-I      intronic
chr5:131084130(-) A-I      intronic
chr5:131022552(-) A-I      intronic
chr5:131035437(-) A-I      intronic
chr5:131012035(-) A-I      intronic
chr5:131023094(-) A-I      intronic
chr5:131084104(-) A-I      intronic
chr5:131033045(-) A-I      intronic
chr5:131004144(-) A-I      intronic
chr5:131085152(-) A-I      intronic
chr5:131001379(-) A-I      intronic
chr5:131030736(-) A-I      intronic
chr5:131010354(-) A-I      intronic
chr5:131008912(-) A-I      intronic
chr5:131012207(-) A-I      intronic
chr5:131008957(-) A-I      intronic
chr5:131086470(-) A-I      intronic
chr5:131084142(-) A-I      intronic
chr5:131084305(-) A-I      intronic
chr5:131012192(-) A-I      intronic
chr5:131022130(-) A-I      intronic
chr5:131084219(-) A-I      intronic
chr5:130989705(-) A-I      intronic
chr5:131009044(-) A-I      intronic
chr5:131088535(-) A-I      intronic
chr5:131051039(-) A-I      intronic
chr5:130988958(-) A-I      intronic
chr5:131101858(-) A-I      intronic
chr5:131022106(-) A-I      intronic
chr5:131022877(-) A-I      intronic
chr5:131009643(-) A-I      intronic
chr5:131022937(-) A-I      intronic
chr5:131023071(-) A-I      intronic
chr5:130991022(-) A-I      intronic
chr5:131018178(-) A-I      intronic
chr5:131018358(-) A-I      intronic
chr5:131126109(-) A-I      intronic
chr5:131074318(-) A-I      intronic
chr5:131084157(-) A-I      intronic
chr5:131003463(-) A-I      intronic
chr5:130989700(-) A-I      intronic
chr5:131084290(-) A-I      intronic
chr5:131084260(-) A-I      intronic
chr5:131047385(-) A-I      intronic
chr5:131047455(-) A-I      intronic
chr5:130983362(-) A-I      intronic
chr5:130988501(-) A-I      intronic
chr5:131088008(-) A-I      intronic
chr5:131089603(-) A-I      intronic
chr5:130998529(-) A-I      intronic
chr5:131057327(-) A-I      intronic
chr5:131129793(-) A-I      intronic
chr5:131100908(-) A-I      intronic
chr5:131111493(-) A-I      intronic
chr5:131088516(-) A-I      intronic
chr5:131035579(-) A-I      intronic
chr5:131084278(-) A-I      intronic
chr5:131030707(-) A-I      intronic
chr5:131074647(-) A-I      intronic
chr5:131084333(-) A-I      intronic
chr5:131084152(-) A-I      intronic
chr5:131084327(-) A-I      intronic
chr5:131084143(-) A-I      intronic
chr5:131084205(-) A-I      intronic
chr5:131018282(-) A-I      intronic
chr5:131021374(-) A-I      intronic
chr5:131033091(-) A-I      intronic
chr5:130988420(-) A-I      intronic
chr5:131022992(-) A-I      intronic
chr5:131084112(-) A-I      intronic
chr5:130988613(-) A-I      intronic
chr5:130983916(-) A-I      intronic
chr5:131022895(-) A-I      intronic
chr5:131018310(-) A-I      intronic
chr5:131019052(-) A-I      intronic
chr5:131030643(-) A-I      intronic
chr5:131035865(-) A-I      intronic
chr5:131000172(-) A-I      intronic
chr5:131010342(-) A-I      intronic
chr5:131084344(-) A-I      intronic
chr5:131074402(-) A-I      intronic
chr5:131035461(-) A-I      intronic
chr5:131010151(-) A-I      intronic
chr5:131009537(-) A-I      intronic
chr5:131001532(-) A-I      intronic
chr5:131084222(-) A-I      intronic
chr5:131047478(-) A-I      intronic
chr5:131000106(-) A-I      intronic
chr5:130983346(-) A-I      intronic
chr5:131100289(-) A-I      intronic
chr5:131086582(-) A-I      intronic
chr5:131019037(-) A-I      intronic
chr5:131084343(-) A-I      intronic
chr5:131030541(-) A-I      intronic
chr5:131022184(-) A-I      intronic
chr5:131018298(-) A-I      intronic
chr5:131018244(-) A-I      intronic
chr5:130983291(-) A-I      intronic
chr5:131018301(-) A-I      intronic
chr5:131088009(-) A-I      intronic
chr5:131088678(-) A-I      intronic
chr5:131035607(-) A-I      intronic
chr5:131047435(-) A-I      intronic
chr5:131012233(-) A-I      intronic
chr5:131067085(-) A-I      intronic
chr5:131084308(-) A-I      intronic
chr5:131009605(-) A-I      intronic
chr5:131011648(-) A-I      intronic
chr5:131101934(-) A-I      intronic
chr5:131129001(-) A-I      intronic
chr5:131012304(-) A-I      intronic
chr5:131115676(-) A-I      intronic
chr5:131129874(-) A-I      intronic
chr5:130983825(-) A-I      intronic
chr5:130983766(-) A-I      intronic
chr5:130978439(-) A-I      3'UTR
chr5:130983760(-) A-I      intronic
chr5:131109836(-) A-I      intronic
chr5:131130454(-) A-I      intronic
chr5:131086573(-) A-I      intronic
chr5:131085151(-) A-I      intronic
chr5:131000181(-) A-I      intronic
chr5:131100058(-) A-I      intronic
chr5:131021340(-) A-I      intronic
chr5:131051096(-) A-I      intronic
chr5:130991434(-) A-I      intronic
chr5:131047289(-) A-I      intronic
chr5:131022963(-) A-I      intronic
chr5:130992713(-) A-I      intronic
chr5:131023088(-) A-I      intronic
chr5:131129839(-) A-I      intronic
chr5:131058507(-) A-I      intronic
chr5:131035848(-) A-I      intronic
chr5:131100142(-) A-I      intronic
chr5:131048850(-) A-I      intronic
chr5:130989612(-) A-I      intronic
chr5:131012115(-) A-I      intronic
chr5:131021351(-) A-I      intronic
chr5:130993634(-) A-I      intronic
chr5:131035183(-) A-I      intronic
chr5:131012439(-) A-I      intronic
chr5:131030595(-) A-I      intronic
chr5:131008812(-) A-I      intronic
chr5:131010287(-) A-I      intronic
chr5:131008838(-) A-I      intronic
chr5:131016441(-) A-I      intronic
chr5:131019183(-) A-I      intronic
chr5:131009629(-) A-I      intronic
chr5:130983263(-) A-I      intronic
chr5:131100874(-) A-I      intronic
chr5:131023085(-) A-I      intronic
chr5:131126023(-) A-I      intronic
chr5:130992793(-) A-I      intronic
chr5:131020838(-) A-I      intronic
chr5:131022178(-) A-I      intronic
chr5:131118007(-) A-I      intronic
chr5:131101888(-) A-I      intronic
chr5:131058561(-) A-I      intronic
chr5:131085222(-) A-I      intronic
chr5:131021330(-) A-I      intronic
chr5:131035783(-) A-I      intronic
chr5:131128810(-) A-I      intronic
chr5:131047386(-) A-I      intronic
chr5:131012079(-) A-I      intronic
chr5:130988215(-) A-I      intronic
chr5:131033476(-) A-I      intronic
chr5:131020850(-) A-I      intronic
chr5:131088763(-) A-I      intronic
chr5:131035487(-) A-I      intronic
chr5:131020889(-) A-I      intronic
chr5:130983923(-) A-I      intronic
chr5:131075446(-) A-I      intronic
chr5:130983855(-) A-I      intronic
chr5:131035526(-) A-I      intronic
chr5:130983918(-) A-I      intronic
chr5:131010267(-) A-I      intronic
chr5:131126089(-) A-I      intronic
chr5:131033562(-) A-I      intronic
chr5:130986971(-) A-I      intronic
chr5:130992954(-) A-I      intronic
chr5:131010289(-) A-I      intronic
chr5:131012340(-) A-I      intronic
chr5:131100162(-) A-I      intronic
chr5:131035792(-) A-I      intronic
chr5:131112753(-) A-I      intronic
chr5:131104246(-) A-I      intronic
chr5:131051060(-) A-I      intronic
chr5:131012343(-) A-I      intronic
chr5:130983924(-) A-I      intronic
chr5:131071757(-) A-I      intronic
chr5:131087938(-) A-I      intronic
chr5:131117660(-) A-I      intronic
chr5:131112707(-) A-I      intronic
chr5:131057257(-) A-I      intronic
chr5:131047448(-) A-I      intronic
chr5:131021436(-) A-I      intronic
chr5:131057431(-) A-I      intronic
chr5:131088752(-) A-I      intronic
chr5:130989046(-) A-I      intronic
chr5:130998516(-) A-I      intronic
chr5:131067129(-) A-I      intronic
chr5:130998673(-) A-I      intronic
chr5:131091626(-) A-I      intronic
chr5:131010190(-) A-I      intronic
chr5:130983393(-) A-I      intronic
chr5:131035469(-) A-I      intronic
chr5:131089778(-) A-I      intronic
chr5:130988306(-) A-I      intronic
chr5:131111415(-) A-I      intronic
chr5:130983806(-) A-I      intronic
chr5:131075262(-) A-I      intronic
chr5:131051013(-) A-I      intronic
chr5:131011676(-) A-I      intronic
chr5:131035184(-) A-I      intronic
chr5:130988482(-) A-I      intronic
chr5:131033017(-) A-I      intronic
chr5:131101891(-) A-I      intronic
chr5:131051051(-) A-I      intronic
chr5:131130464(-) A-I      intronic
chr5:131008809(-) A-I      intronic
chr5:131035454(-) A-I      intronic
chr5:131012312(-) A-I      intronic
chr5:131101802(-) A-I      intronic
chr5:131021274(-) A-I      intronic
chr5:131109899(-) A-I      intronic
chr5:131089786(-) A-I      intronic
chr5:131000110(-) A-I      intronic
chr5:131035509(-) A-I      intronic
chr5:131128863(-) A-I      intronic
chr5:130991437(-) A-I      intronic
chr5:131020977(-) A-I      intronic
chr5:130983264(-) A-I      intronic
chr5:131004342(-) A-I      intronic
chr5:131033467(-) A-I      intronic
chr5:130986865(-) A-I      intronic
chr5:131012191(-) A-I      intronic
chr5:131075342(-) A-I      intronic
chr5:131104337(-) A-I      intronic
chr5:131086444(-) A-I      intronic
chr5:131100093(-) A-I      intronic
chr5:131023018(-) A-I      intronic
chr5:131035841(-) A-I      intronic
chr5:131012114(-) A-I      intronic
chr5:131009030(-) A-I      intronic
chr5:131100126(-) A-I      intronic
chr5:131022959(-) A-I      intronic
chr5:131023002(-) A-I      intronic
chr5:130983330(-) A-I      intronic
chr5:131117594(-) A-I      intronic
chr5:131109929(-) A-I      intronic
chr5:131084268(-) A-I      intronic
chr5:131047352(-) A-I      intronic
chr5:130983981(-) A-I      intronic
chr5:131085214(-) A-I      intronic
chr5:131012248(-) A-I      intronic
chr5:131011700(-) A-I      intronic
chr5:131128036(-) A-I      intronic
chr5:131012420(-) A-I      intronic
chr5:131035773(-) A-I      intronic
chr5:131100098(-) A-I      intronic
chr5:131075333(-) A-I      intronic
chr5:131001745(-) A-I      intronic
chr5:131035446(-) A-I      intronic
chr5:131009524(-) A-I      intronic
chr5:131020906(-) A-I      intronic
chr5:130988216(-) A-I      intronic
chr5:131050987(-) A-I      intronic
chr5:130986964(-) A-I      intronic
chr5:131126153(-) A-I      intronic
chr5:131128018(-) A-I      intronic
chr5:131010216(-) A-I      intronic
chr5:131011615(-) A-I      intronic
chr5:131035557(-) A-I      intronic
chr5:131021209(-) A-I      intronic
chr5:131000234(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FNIP1
chr5:131022178(-) A-I intron -    22327324
chr5:131047448(-) A-I intron -    22327324
chr5:131084104(-) A-I intron -    22028664
chr5:131084112(-) A-I intron -    22028664
chr5:131084130(-) A-I intron -    22028664
chr5:131084142(-) A-I intron -    22028664
chr5:131084143(-) A-I intron -    22028664
chr5:131084152(-) A-I intron -    22028664
chr5:131084157(-) A-I intron -    22028664
chr5:131084197(-) A-I intron -    22028664
chr5:131084205(-) A-I intron -    22028664
chr5:131084219(-) A-I intron -    22028664
chr5:131084222(-) A-I intron -    22028664
chr5:131084260(-) A-I intron -    22028664
chr5:131084268(-) A-I intron -    22028664
chr5:131084278(-) A-I intron -    22028664
chr5:131084290(-) A-I intron -    22028664
chr5:131084305(-) A-I intron -    22028664
chr5:131084308(-) A-I intron -    22028664
chr5:131084327(-) A-I intron -    22028664
chr5:131084333(-) A-I intron -    22028664
chr5:131084343(-) A-I intron -    22028664
chr5:131084344(-) A-I intron -    22028664
chr5:130983918(-) A-I intron -    21960545
chr5:130983924(-) A-I intron -    21960545
chr5:130983980(-) A-I intron -    21960545
chr5:130983981(-) A-I intron -    21960545
chr5:131018288(-) A-I intron -    21960545
chr5:131018301(-) A-I intron -    21960545
chr5:131020850(-) A-I intron -    21960545
chr5:131033090(-) A-I intron -    21960545
chr5:131033091(-) A-I intron -    21960545
chr5:131118651(-) A-I intron -    21960545
chr5:131130381(-) A-I intron -    21960545
chr5:131130382(-) A-I intron -    21960545
chr5:131084665(-) C-T intron -    22484847
chr5:131099164(-) A-G intron -    22484847
chr5:131099890(-) A-G intron -    22484847
chr5:131099927(-) A-G intron -    22484847
chr5:130978439(-) A-G exon 3'UTR    22484847
chr5:130978560(-) G-T exon 3'UTR    22484847
chr5:130981018(-) G-T intron -    22484847
chr5:130983291(-) A-G intron -    22484847
chr5:130983305(-) A-G intron -    22484847
chr5:130983401(-) A-G intron -    22484847
chr5:130983760(-) A-G intron -    22484847
chr5:130983766(-) A-G intron -    22484847
chr5:130983806(-) A-G intron -    22484847
chr5:130983851(-) A-G intron -    22484847
chr5:130983865(-) A-T intron -    22484847
chr5:130983866(-) A-T intron -    22484847
chr5:130983916(-) A-G intron -    22484847
chr5:130983918(-) A-G intron -    22484847
chr5:130983923(-) A-G intron -    22484847
chr5:130983924(-) A-G intron -    22484847
chr5:130983981(-) A-G intron -    22484847
chr5:130986964(-) A-G intron -    22484847
chr5:130988215(-) A-G intron -    22484847
chr5:130988216(-) A-G intron -    22484847
chr5:130988300(-) A-G intron -    22484847
chr5:130988306(-) A-G intron -    22484847
chr5:130988307(-) A-G intron -    22484847
chr5:130988482(-) A-G intron -    22484847
chr5:130988958(-) A-G intron -    22484847
chr5:130989046(-) A-G intron -    22484847
chr5:130989612(-) A-G intron -    22484847
chr5:130989617(-) A-G intron -    22484847
chr5:130989700(-) A-G intron -    22484847
chr5:130989705(-) A-G intron -    22484847
chr5:130992954(-) A-G intron -    22484847
chr5:130998500(-) A-G intron -    22484847
chr5:130998516(-) A-G intron -    22484847
chr5:130998673(-) A-G intron -    22484847
chr5:131000180(-) A-G intron -    22484847
chr5:131000297(-) A-G intron -    22484847
chr5:131009629(-) A-G intron -    22484847
chr5:131009643(-) A-G intron -    22484847
chr5:131009646(-) A-G intron -    22484847
chr5:131010216(-) A-G intron -    22484847
chr5:131010287(-) A-G intron -    22484847
chr5:131010354(-) A-G intron -    22484847
chr5:131011615(-) A-G intron -    22484847
chr5:131011978(-) A-G intron -    22484847
chr5:131012059(-) A-G intron -    22484847
chr5:131012114(-) A-G intron -    22484847
chr5:131012115(-) A-G intron -    22484847
chr5:131012191(-) A-G intron -    22484847
chr5:131012192(-) A-G intron -    22484847
chr5:131012194(-) A-G intron -    22484847
chr5:131012207(-) A-G intron -    22484847
chr5:131012233(-) A-G intron -    22484847
chr5:131012248(-) A-G intron -    22484847
chr5:131012340(-) A-G intron -    22484847
chr5:131012343(-) A-G intron -    22484847
chr5:131012352(-) A-G intron -    22484847
chr5:131012357(-) A-G intron -    22484847
chr5:131012439(-) A-G intron -    22484847
chr5:131018167(-) A-G intron -    22484847
chr5:131018282(-) A-G intron -    22484847
chr5:131018288(-) A-G intron -    22484847
chr5:131018298(-) A-G intron -    22484847
chr5:131018301(-) A-G intron -    22484847
chr5:131018310(-) A-G intron -    22484847
chr5:131018327(-) A-G intron -    22484847
chr5:131018358(-) A-G intron -    22484847
chr5:131018376(-) A-G intron -    22484847
chr5:131019037(-) A-G intron -    22484847
chr5:131019052(-) A-G intron -    22484847
chr5:131019183(-) A-G intron -    22484847
chr5:131020838(-) A-G intron -    22484847
chr5:131020850(-) A-G intron -    22484847
chr5:131022178(-) A-G intron -    22484847
chr5:131022910(-) A-G intron -    22484847
chr5:131022936(-) A-G intron -    22484847
chr5:131022937(-) A-G intron -    22484847
chr5:131022959(-) A-G intron -    22484847
chr5:131022963(-) A-G intron -    22484847
chr5:131022992(-) A-G intron -    22484847
chr5:131023017(-) A-G intron -    22484847
chr5:131023018(-) A-G intron -    22484847
chr5:131023045(-) A-G intron -    22484847
chr5:131023071(-) A-G intron -    22484847
chr5:131023085(-) A-G intron -    22484847
chr5:131023088(-) A-G intron -    22484847
chr5:131023090(-) A-G intron -    22484847
chr5:131028712(-) A-T intron -    22484847
chr5:131028715(-) T-A intron -    22484847
chr5:131033090(-) A-G intron -    22484847
chr5:131033091(-) A-G intron -    22484847
chr5:131033467(-) A-G intron -    22484847
chr5:131033562(-) A-G intron -    22484847
chr5:131033660(-) A-T intron -    22484847
chr5:131033661(-) G-T intron -    22484847
chr5:131035183(-) A-G intron -    22484847
chr5:131035184(-) A-G intron -    22484847
chr5:131035437(-) A-G intron -    22484847
chr5:131035446(-) A-G intron -    22484847
chr5:131035461(-) A-G intron -    22484847
chr5:131035487(-) A-G intron -    22484847
chr5:131035509(-) A-G intron -    22484847
chr5:131035526(-) A-G intron -    22484847
chr5:131035527(-) A-G intron -    22484847
chr5:131035557(-) A-G intron -    22484847
chr5:131035607(-) A-G intron -    22484847
chr5:131035773(-) A-G intron -    22484847
chr5:131035792(-) A-G intron -    22484847
chr5:131035841(-) A-G intron -    22484847
chr5:131035848(-) A-G intron -    22484847
chr5:131035865(-) A-G intron -    22484847
chr5:131047279(-) A-G intron -    22484847
chr5:131047294(-) A-G intron -    22484847
chr5:131047386(-) A-G intron -    22484847
chr5:131047412(-) A-G intron -    22484847
chr5:131047448(-) A-G intron -    22484847
chr5:131047478(-) A-G intron -    22484847
chr5:131048845(-) A-G intron -    22484847
chr5:131051039(-) A-G intron -    22484847
chr5:131051051(-) A-G intron -    22484847
chr5:131057324(-) A-G intron -    22484847
chr5:131057327(-) A-G intron -    22484847
chr5:131057431(-) A-G intron -    22484847
chr5:131067346(-) G-T intron -    22484847
chr5:131075317(-) A-G intron -    22484847
chr5:131075333(-) A-G intron -    22484847
chr5:131075446(-) A-G intron -    22484847
chr5:131084197(-) A-G intron -    22484847
chr5:131084268(-) A-G intron -    22484847
chr5:131084308(-) A-G intron -    22484847
chr5:131085181(-) A-G intron -    22484847
chr5:131085214(-) A-G intron -    22484847
chr5:131085222(-) A-G intron -    22484847
chr5:131085231(-) A-G intron -    22484847
chr5:131086470(-) A-G intron -    22484847
chr5:131086573(-) A-G intron -    22484847
chr5:131086582(-) A-G intron -    22484847
chr5:131087938(-) A-G intron -    22484847
chr5:131088008(-) A-G intron -    22484847
chr5:131088009(-) A-G intron -    22484847
chr5:131088574(-) A-G intron -    22484847
chr5:131088643(-) A-G intron -    22484847
chr5:131088678(-) A-G intron -    22484847
chr5:131088718(-) A-G intron -    22484847
chr5:131088719(-) A-G intron -    22484847
chr5:131088752(-) A-G intron -    22484847
chr5:131088763(-) A-G intron -    22484847
chr5:131089603(-) A-G intron -    22484847
chr5:131091626(-) A-G intron -    22484847
chr5:131100098(-) A-G intron -    22484847
chr5:131100142(-) A-G intron -    22484847
chr5:131100289(-) A-G intron -    22484847
chr5:131100908(-) A-G intron -    22484847
chr5:131104487(-) C-T intron -    22484847
chr5:131111415(-) A-G intron -    22484847
chr5:131111422(-) A-G intron -    22484847
chr5:131111458(-) A-G intron -    22484847
chr5:131111494(-) A-G intron -    22484847
chr5:131112707(-) A-G intron -    22484847
chr5:131112708(-) A-G intron -    22484847
chr5:131112753(-) A-G intron -    22484847
chr5:131118007(-) A-G intron -    22484847
chr5:131124337(-) A-G intron -    22484847
chr5:131127991(-) A-G intron -    22484847
chr5:131128869(-) A-G intron -    22484847
chr5:131128906(-) A-T intron -    22484847
chr5:131129007(-) A-G intron -    22484847
chr5:131130408(-) A-G intron -    22484847
chr5:131130454(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FNIP1
chr5:130978829-130978830(-) m6A 3'UTR       27773535
chr5:130978863-130978864(-) m6A 3'UTR       27773535
chr5:130978875-130978876(-) m6A 3'UTR       27773535
chr5:130979423-130979424(-) m6A 3'UTR       27773535
chr5:130979490-130979491(-) m6A 3'UTR       27773535
chr5:130980167-130980168(-) m6A 3'UTR       24981863
chr5:130980193-130980194(-) m6A 3'UTR       24981863
chr5:130980281-130980282(-) m6A 3'UTR       24981863
chr5:130980320-130980321(-) m6A 3'UTR       27773535
chr5:130980333-130980334(-) m6A 3'UTR       27773535
chr5:131007265-131007266(-) m6A CDS       24284625//24981863//27773535//22608085
chr5:131007317-131007318(-) m6A CDS       24284625//24981863//28052920//27773535//27371828//22608085
chr5:131007341-131007342(-) m6A CDS       24284625//24981863//28052920//27773535//27371828//22608085
chr5:131007351-131007352(-) m6A CDS       24284625//24981863//28052920//27773535//22608085
chr5:131007425-131007426(-) m6A CDS       24284625//24981863//27773535//22608085
chr5:131007444-131007445(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr5:131007468-131007469(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr5:131007494-131007495(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr5:131007551-131007552(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr5:131007570-131007571(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr5:131007594-131007595(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:131007600-131007601(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:131007653-131007654(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:131007676-131007677(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:131007701-131007702(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:131007728-131007729(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:131007742-131007743(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr5:131007747-131007748(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr5:131007790-131007791(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr5:131007802-131007803(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr5:131007891-131007892(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr5:131007940-131007941(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085
chr5:131007992-131007993(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr5:131008023-131008024(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr5:131008067-131008068(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr5:131008098-131008099(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr5:131008122-131008123(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr5:131008144-131008145(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr5:131008232-131008233(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr5:131008265-131008266(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr5:131008323-131008324(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//27371828//22608085
chr5:131008364-131008365(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr5:131008495-131008496(-) m6A CDS       24284625//24981863//27773535//22608085
chr5:131008547-131008548(-) m6A CDS       24284625//24981863//22608085
chr5:131008572-131008573(-) m6A CDS       24284625//24981863//22608085
chr5:131008613-131008614(-) m6A CDS       24981863
chr5:131066707-131066708(-) Y CDS//intron       26075521
chr5:131131913-131131914(-) m6A exon//intron       -
chr5:131131951-131131952(-) m6A exon//intron       -
chr5:131132164-131132165(-) m6A exon//intron       -
chr5:131132221-131132222(-) m6A exon//intron       -
chr5:131132241-131132242(-) m6A exon//intron       -
chr5:131132540-131132541(-) m6A 5'UTR//CDS//exon       27371828
chr5:131132574-131132575(-) m6A 5'UTR//CDS//exon       24981863//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-320b
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome Pooled sera     27278097
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Ovarian follicular fluid     22116803
Exosome Plasma     23663360
Exosome Colon cancer cell line (LIM1863)     25330373
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Hepatoma cells     23771658
Microvesicle Serum     24797360
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Skeletal muscle myoblasts     21637849
Mitochondrion Cell line (HEK-293|HeLa)     22984580
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Nucleus Nasopharyngeal carcinoma cells     20498841
FNIP1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-320b
Eloxatine 5310940 Drug interaction    RC00007663
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007662
Benzene 241 Drug interaction    RC00007661
Marine fungal metabolite 1386A - Drug interaction    RC00007664
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-320b
Topotecan       60700

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-320b
Interactor2: FNIP1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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