Detail Information

Basic Information:


  VIRBase ID:  

HHID00068787

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-320b:           BTBD7:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-320b BTBD7
miRBase
Accession/Entrez ID
MIMAT0005792 55727
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - FUP1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-320b
rs1156276707 chr1:116671796    G/T
rs1311857670 chr1:116671805    GCAAA/G
rs1373244526 chr1:116671806    C/T
rs1434535374 chr1:116671803    G/C
rs755613466 chr1:116671797    T/C
rs779451916 chr1:116671801    G/C
rs1303311077 chr1:224257059    A/T
rs1313950455 chr1:224257062    C/A
rs1333032274 chr1:224257051    G/T
rs1445839645 chr1:224257055    T/C
rs1465806287 chr1:224257050    TGCCC/T
rs745315768 chr1:224257052    C/T
rs769446888 chr1:224257054    C/T
rs1189118293 chr1:116671788    A/G
rs1199375375 chr1:116671794    G/A
rs1411861918 chr1:116671791    G/T
rs1469116635 chr1:116671792    C/CTGGGTTGAGAGGGCAAACAAATTAACTAAT
rs1030808536 chr1:224257064    A/T
rs774951709 chr1:224257069    T/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BTBD7
chr14:93748977(-) A-I      intronic
chr14:93748906(-) A-I      intronic
chr14:93748898(-) A-I      intronic
chr14:93738276(-) A-I      intronic
chr14:93788683(-) A-I      intronic
chr14:93788647(-) A-I      intronic
chr14:93738230(-) A-I      intronic
chr14:93748897(-) A-I      intronic
chr14:93748867(-) A-I      intronic
chr14:93748847(-) A-I      intronic
chr14:93750005(-) A-I      intronic
chr14:93738252(-) A-I      intronic
chr14:93738212(-) A-I      intronic
chr14:93747691(-) A-I      intronic
chr14:93748950(-) A-I      intronic
chr14:93753463(-) A-I      intronic
chr14:93736580(-) A-I      intronic
chr14:93736617(-) A-I      intronic
chr14:93748949(-) A-I      intronic
chr14:93711387(-) A-I      intronic
chr14:93711370(-) A-I      intronic
chr14:93736645(-) A-I      intronic
chr14:93736646(-) A-I      intronic
chr14:93738182(-) A-I      intronic
chr14:93738186(-) A-I      intronic
chr14:93748944(-) A-I      intronic
chr14:93748928(-) A-I      intronic
chr14:93736915(-) A-I      intronic
chr14:93789412(-) A-I      intronic
chr14:93789243(-) A-I      intronic
chr14:93788721(-) A-I      intronic
chr14:93748923(-) A-I      intronic
chr14:93744642(-) A-I      intronic
chr14:93788716(-) A-I      intronic
chr14:93731242(-) A-I      intronic
chr14:93748790(-) A-I      intronic
chr14:93746009(-) A-I      intronic
chr14:93748803(-) A-I      intronic
chr14:93748817(-) A-I      intronic
chr14:93788643(-) A-I      intronic
chr14:93787776(-) A-I      intronic
chr14:93767954(-) A-I      intronic
chr14:93789313(-) A-I      intronic
chr14:93748839(-) A-I      intronic
chr14:93748843(-) A-I      intronic
chr14:93748848(-) A-I      intronic
chr14:93756932(-) A-I      intronic
chr14:93788627(-) A-I      intronic
chr14:93753427(-) A-I      intronic
chr14:93749703(-) A-I      intronic
chr14:93788731(-) A-I      intronic
chr14:93788556(-) A-I      intronic
chr14:93748855(-) A-I      intronic
chr14:93788620(-) A-I      intronic
chr14:93748882(-) A-I      intronic
chr14:93788608(-) A-I      intronic
chr14:93735103(-) A-I      intronic
chr14:93743333(-) A-I      intronic
chr14:93736984(-) A-I      intronic
chr14:93736917(-) A-I      intronic
chr14:93787839(-) A-I      intronic
chr14:93743499(-) A-I      intronic
chr14:93736913(-) A-I      intronic
chr14:93788660(-) A-I      intronic
chr14:93736817(-) A-I      intronic
chr14:93774451(-) A-I      intronic
chr14:93787830(-) A-I      intronic
chr14:93736638(-) A-I      intronic
chr14:93748919(-) A-I      intronic
chr14:93736611(-) A-I      intronic
chr14:93736539(-) A-I      intronic
chr14:93735104(-) A-I      intronic
chr14:93787817(-) A-I      intronic
chr14:93743512(-) A-I      intronic
chr14:93748943(-) A-I      intronic
chr14:93726985(-) A-I      intronic
chr14:93718430(-) A-I      intronic
chr14:93718421(-) A-I      intronic
chr14:93749516(-) A-I      intronic
chr14:93773775(-) A-I      intronic
chr14:93711431(-) A-I      intronic
chr14:93710995(-) A-I      intronic
chr14:93750035(-) A-I      intronic
chr14:93787773(-) A-I      intronic
chr14:93710909(-) A-I      intronic
chr14:93710883(-) A-I      intronic
chr14:93748715(-) A-I      intronic
chr14:93748761(-) A-I      intronic
chr14:93750036(-) A-I      intronic
chr14:93748764(-) A-I      intronic
chr14:93748776(-) A-I      intronic
chr14:93710863(-) A-I      intronic
chr14:93769109(-) A-I      intronic
chr14:93785559(-) A-I      intronic
chr14:93750062(-) A-I      intronic
chr14:93750068(-) A-I      intronic
chr14:93750080(-) A-I      intronic
chr14:93750097(-) A-I      intronic
chr14:93750105(-) A-I      intronic
chr14:93753357(-) A-I      intronic
chr14:93742368(-) A-I      intronic
chr14:93753369(-) A-I      intronic
chr14:93753544(-) A-I      intronic
chr14:93756276(-) A-I      intronic
chr14:93787721(-) A-I      intronic
chr14:93777008(-) A-I      intronic
chr14:93776925(-) A-I      intronic
chr14:93756288(-) A-I      intronic
chr14:93770891(-) A-I      intronic
chr14:93757194(-) A-I      intronic
chr14:93770795(-) A-I      intronic
chr14:93770765(-) A-I      intronic
chr14:93770763(-) A-I      intronic
chr14:93787815(-) A-I      intronic
chr14:93769321(-) A-I      intronic
chr14:93736994(-) A-I      intronic
chr14:93769025(-) A-I      intronic
chr14:93769008(-) A-I      intronic
chr14:93768999(-) A-I      intronic
chr14:93768986(-) A-I      intronic
chr14:93768949(-) A-I      intronic
chr14:93768031(-) A-I      intronic
chr14:93768021(-) A-I      intronic
chr14:93736995(-) A-I      intronic
chr14:93791746(-) A-I      intronic
chr14:93753567(-) A-I      intronic
chr14:93787771(-) A-I      intronic
chr14:93738283(-) A-I      intronic
chr14:93719313(-) A-I      intronic
chr14:93738318(-) A-I      intronic
chr14:93788666(-) A-I      intronic
chr14:93742303(-) A-I      intronic
chr14:93787811(-) A-I      intronic
chr14:93793039(-) A-I      intronic
chr14:93711416(-) A-I      intronic
chr14:93767983(-) A-I      intronic
chr14:93767973(-) A-I      intronic
chr14:93742315(-) A-I      intronic
chr14:93756430(-) A-I      intronic
chr14:93788688(-) A-I      intronic
chr14:93767928(-) A-I      intronic
chr14:93788551(-) A-I      intronic
chr14:93767927(-) A-I      intronic
chr14:93767809(-) A-I      intronic
chr14:93756295(-) A-I      intronic
chr14:93783640(-) A-I      intronic
chr14:93767783(-) A-I      intronic
chr14:93738315(-) A-I      intronic
chr14:93767519(-) A-I      intronic
chr14:93773774(-) A-I      intronic
chr14:93731388(-) A-I      intronic
chr14:93788737(-) A-I      intronic
chr14:93756340(-) A-I      intronic
chr14:93767518(-) A-I      intronic
chr14:93756331(-) A-I      intronic
chr14:93763872(-) A-I      intronic
chr14:93763829(-) A-I      intronic
chr14:93759141(-) A-I      intronic
chr14:93789386(-) A-I      intronic
chr14:93742454(-) A-I      intronic
chr14:93759110(-) A-I      intronic
chr14:93759049(-) A-I      intronic
chr14:93787735(-) A-I      intronic
chr14:93710829(-) A-I      intronic
chr14:93742559(-) A-I      intronic
chr14:93789215(-) A-I      intronic
chr14:93758487(-) A-I      intronic
chr14:93743368(-) A-I      intronic
chr14:93758350(-) A-I      intronic
chr14:93758330(-) A-I      intronic
chr14:93758329(-) A-I      intronic
chr14:93757451(-) A-I      intronic
chr14:93757437(-) A-I      intronic
chr14:93757425(-) A-I      intronic
chr14:93769108(-) A-I      intronic
chr14:93757190(-) A-I      intronic
chr14:93757134(-) A-I      intronic
chr14:93757097(-) A-I      intronic
chr14:93788604(-) A-I      intronic
chr14:93767787(-) A-I      intronic
chr14:93788746(-) A-I      intronic
chr14:93791489(-) A-I      intronic
chr14:93742317(-) A-I      intronic
chr14:93789562(-) A-I      intronic
chr14:93791454(-) A-I      intronic
chr14:93726092(-) A-I      intronic
chr14:93756830(-) A-I      intronic
chr14:93780134(-) A-I      intronic
chr14:93788521(-) A-I      intronic
chr14:93789320(-) A-I      intronic
chr14:93787857(-) A-I      intronic
chr14:93718816(-) A-I      intronic
chr14:93792991(-) A-I      intronic
chr14:93791598(-) A-I      intronic
chr14:93791600(-) A-I      intronic
chr14:93773549(-) A-I      intronic
chr14:93788582(-) A-I      intronic
chr14:93791659(-) A-I      intronic
chr14:93785526(-) A-I      intronic
chr14:93743498(-) A-I      intronic
chr14:93773644(-) A-I      intronic
chr14:93736958(-) A-I      intronic
chr14:93782678(-) A-I      intronic
chr14:93747620(-) A-I      intronic
chr14:93789384(-) A-I      intronic
chr14:93776936(-) A-I      intronic
chr14:93789393(-) A-I      intronic
chr14:93718528(-) A-I      intronic
chr14:93747629(-) A-I      intronic
chr14:93788624(-) A-I      intronic
chr14:93777059(-) A-I      intronic
chr14:93792633(-) A-I      intronic
chr14:93790528(-) A-I      intronic
chr14:93788628(-) A-I      intronic
chr14:93780334(-) A-I      intronic
chr14:93736959(-) A-I      intronic
chr14:93789353(-) A-I      intronic
chr14:93783427(-) A-I      intronic
chr14:93789216(-) A-I      intronic
chr14:93742563(-) A-I      intronic
chr14:93785425(-) A-I      intronic
chr14:93749976(-) A-I      intronic
chr14:93736504(-) A-I      intronic
chr14:93726967(-) A-I      intronic
chr14:93736470(-) A-I      intronic
chr14:93769307(-) A-I      intronic
chr14:93718570(-) A-I      intronic
chr14:93789203(-) A-I      intronic
chr14:93787682(-) A-I      intronic
chr14:93765407(-) A-I      intronic
chr14:93728404(-) A-I      intronic
chr14:93791753(-) A-I      intronic
chr14:93769353(-) A-I      intronic
chr14:93736818(-) A-I      intronic
chr14:93718593(-) A-I      intronic
chr14:93727072(-) A-I      intronic
chr14:93767670(-) A-I      intronic
chr14:93756300(-) A-I      intronic
chr14:93746097(-) A-I      intronic
chr14:93787705(-) A-I      intronic
chr14:93718493(-) A-I      intronic
chr14:93767213(-) A-I      intronic
chr14:93745991(-) A-I      intronic
chr14:93735170(-) A-I      intronic
chr14:93709550(-) A-I      intronic
chr14:93742558(-) A-I      intronic
chr14:93758370(-) A-I      intronic
chr14:93768004(-) A-I      intronic
chr14:93753371(-) A-I      intronic
chr14:93748775(-) A-I      intronic
chr14:93789240(-) A-I      intronic
chr14:93742485(-) A-I      intronic
chr14:93773576(-) A-I      intronic
chr14:93736579(-) A-I      intronic
chr14:93787696(-) A-I      intronic
chr14:93782861(-) A-I      intronic
chr14:93788697(-) A-I      intronic
chr14:93789454(-) A-I      intronic
chr14:93787856(-) A-I      intronic
chr14:93788616(-) A-I      intronic
chr14:93767788(-) A-I      intronic
chr14:93736615(-) A-I      intronic
chr14:93788724(-) A-I      intronic
chr14:93769276(-) A-I      intronic
chr14:93749637(-) A-I      intronic
chr14:93738179(-) A-I      intronic
chr14:93748784(-) A-I      intronic
chr14:93789458(-) A-I      intronic
chr14:93737005(-) A-I      intronic
chr14:93777014(-) A-I      intronic
chr14:93738180(-) A-I      intronic
chr14:93793024(-) A-I      intronic
chr14:93767702(-) A-I      intronic
chr14:93777080(-) A-I      intronic
chr14:93747501(-) A-I      intronic
chr14:93789463(-) A-I      intronic
chr14:93769091(-) A-I      intronic
chr14:93766728(-) A-I      intronic
chr14:93790617(-) A-I      intronic
chr14:93790705(-) A-I      intronic
chr14:93788631(-) A-I      intronic
chr14:93788474(-) A-I      intronic
chr14:93787900(-) A-I      intronic
chr14:93749562(-) A-I      intronic
chr14:93736891(-) A-I      intronic
chr14:93738243(-) A-I      intronic
chr14:93770877(-) A-I      intronic
chr14:93750067(-) A-I      intronic
chr14:93761560(-) A-I      intronic
chr14:93789194(-) A-I      intronic
chr14:93790580(-) A-I      intronic
chr14:93788664(-) A-I      intronic
chr14:93711474(-) A-I      intronic
chr14:93757320(-) A-I      intronic
chr14:93749643(-) A-I      intronic
chr14:93757474(-) A-I      intronic
chr14:93769275(-) A-I      intronic
chr14:93742486(-) A-I      intronic
chr14:93780122(-) A-I      intronic
chr14:93788587(-) A-I      intronic
chr14:93788548(-) A-I      intronic
chr14:93747440(-) A-I      intronic
chr14:93749994(-) A-I      intronic
chr14:93770880(-) A-I      intronic
chr14:93738290(-) A-I      intronic
chr14:93789469(-) A-I      intronic
chr14:93769315(-) A-I      intronic
chr14:93788531(-) A-I      intronic
chr14:93769155(-) A-I      intronic
chr14:93742407(-) A-I      intronic
chr14:93711467(-) A-I      intronic
chr14:93769357(-) A-I      intronic
chr14:93753528(-) A-I      intronic
chr14:93767808(-) A-I      intronic
chr14:93757406(-) A-I      intronic
chr14:93757258(-) A-I      intronic
chr14:93756301(-) A-I      intronic
chr14:93789314(-) A-I      intronic
chr14:93735201(-) A-I      intronic
chr14:93748771(-) A-I      intronic
chr14:93788629(-) A-I      intronic
chr14:93787759(-) A-I      intronic
chr14:93788668(-) A-I      intronic
chr14:93742462(-) A-I      intronic
chr14:93790721(-) A-I      intronic
chr14:93789201(-) A-I      intronic
chr14:93777038(-) A-I      intronic
chr14:93718490(-) A-I      intronic
chr14:93727365(-) A-I      intronic
chr14:93789217(-) A-I      intronic
chr14:93756953(-) A-I      intronic
chr14:93720381(-) A-I      intronic
chr14:93757250(-) A-I      intronic
chr14:93766742(-) A-I      intronic
chr14:93768028(-) A-I      intronic
chr14:93767666(-) A-I      intronic
chr14:93736873(-) A-I      intronic
chr14:93747303(-) A-I      intronic
chr14:93758411(-) A-I      intronic
chr14:93726168(-) A-I      intronic
chr14:93742325(-) A-I      intronic
chr14:93736606(-) A-I      intronic
chr14:93789269(-) A-I      intronic
chr14:93789321(-) A-I      intronic
chr14:93736911(-) A-I      intronic
chr14:93710751(-) A-I      intronic
chr14:93797979(-) A-I      intronic
chr14:93770835(-) A-I      intronic
chr14:93789312(-) A-I      intronic
chr14:93767953(-) A-I      intronic
chr14:93736610(-) A-I      intronic
chr14:93788591(-) A-I      intronic
chr14:93743385(-) A-I      intronic
chr14:93776928(-) A-I      intronic
chr14:93743520(-) A-I      intronic
chr14:93766741(-) A-I      intronic
chr14:93758361(-) A-I      intronic
chr14:93738167(-) A-I      intronic
chr14:93790550(-) A-I      intronic
chr14:93793395(-) A-I      intronic
chr14:93719272(-) A-I      intronic
chr14:93788702(-) A-I      intronic
chr14:93718596(-) A-I      intronic
chr14:93787747(-) A-I      intronic
chr14:93788567(-) A-I      intronic
chr14:93793111(-) A-I      intronic
chr14:93761658(-) A-I      intronic
chr14:93727037(-) A-I      intronic
chr14:93793421(-) A-I      intronic
chr14:93743441(-) A-I      intronic
chr14:93719267(-) A-I      intronic
chr14:93738312(-) A-I      intronic
chr14:93718464(-) A-I      intronic
chr14:93788644(-) A-I      intronic
chr14:93787694(-) A-I      intronic
chr14:93783626(-) A-I      intronic
chr14:93711357(-) A-I      intronic
chr14:93769337(-) A-I      intronic
chr14:93785490(-) A-I      intronic
chr14:93738295(-) A-I      intronic
chr14:93785717(-) A-I      intronic
chr14:93782735(-) A-I      intronic
chr14:93787756(-) A-I      intronic
chr14:93768027(-) A-I      intronic
chr14:93756341(-) A-I      intronic
chr14:93788490(-) A-I      intronic
chr14:93718777(-) A-I      intronic
chr14:93711407(-) A-I      intronic
chr14:93753426(-) A-I      intronic
chr14:93742440(-) A-I      intronic
chr14:93793461(-) A-I      intronic
chr14:93791675(-) A-I      intronic
chr14:93767653(-) A-I      intronic
chr14:93711344(-) A-I      intronic
chr14:93788738(-) A-I      intronic
chr14:93721508(-) A-I      intronic
chr14:93735197(-) A-I      intronic
chr14:93719198(-) A-I      intronic
chr14:93742414(-) A-I      intronic
chr14:93788598(-) A-I      intronic
chr14:93766710(-) A-I      intronic
chr14:93736876(-) A-I      intronic
chr14:93738349(-) A-I      intronic
chr14:93789257(-) A-I      intronic
chr14:93767217(-) A-I      intronic
chr14:93767949(-) A-I      intronic
chr14:93753453(-) A-I      intronic
chr14:93767920(-) A-I      intronic
chr14:93767950(-) A-I      intronic
chr14:93767484(-) A-I      intronic
chr14:93783489(-) A-I      intronic
chr14:93777033(-) A-I      intronic
chr14:93791762(-) A-I      intronic
chr14:93788537(-) A-I      intronic
chr14:93788684(-) A-I      intronic
chr14:93716969(-) A-I      intronic
chr14:93777007(-) A-I      intronic
chr14:93736951(-) A-I      intronic
chr14:93738289(-) A-I      intronic
chr14:93776969(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED BTBD7
chr14:93788724(-) A-I intron -    22327324
chr14:93788567(-) A-I intron -    21960545
chr14:93738243(-) A-G intron -    22484847
chr14:93780334(-) A-G intron -    22484847
chr14:93788628(-) A-G intron -    22484847
chr14:93788631(-) A-G intron -    22484847
chr14:93788688(-) A-G intron -    22484847
chr14:93788724(-) A-G intron -    22484847
chr14:93788737(-) A-G intron -    22484847
chr14:93789240(-) A-G intron -    22484847
chr14:93789269(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BTBD7
chr14:93706163-93706164(-) m6A 3'UTR       24981863
chr14:93706209-93706210(-) m6A 3'UTR       24981863//27773535
chr14:93706247-93706248(-) m6A 3'UTR       24981863//27773535
chr14:93706270-93706271(-) m6A 3'UTR       24981863//27773535
chr14:93706279-93706280(-) m6A 3'UTR       24981863//27773535
chr14:93706988-93706989(-) m6A 3'UTR       27773535
chr14:93706996-93706997(-) m6A 3'UTR       27773535
chr14:93707361-93707362(-) m6A 3'UTR       24981863//22608085
chr14:93707408-93707409(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr14:93707518-93707519(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr14:93707570-93707571(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr14:93707691-93707692(-) m6A 3'UTR       25456834//24981863//27773535//22608085
chr14:93707714-93707715(-) m6A 3'UTR       24981863//27773535//22608085
chr14:93707794-93707795(-) m6A 3'UTR       24981863
chr14:93707830-93707831(-) m6A 3'UTR       24981863
chr14:93708274-93708275(-) m6A 3'UTR       24981863
chr14:93708374-93708375(-) m6A 3'UTR       27773535
chr14:93708402-93708403(-) m6A 3'UTR       27773535
chr14:93708467-93708468(-) m6A 3'UTR       27773535
chr14:93708545-93708546(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr14:93708581-93708582(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93708646-93708647(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93708739-93708740(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:93708747-93708748(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:93708801-93708802(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:93708833-93708834(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:93708845-93708846(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:93708904-93708905(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93708960-93708961(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709014-93709015(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709155-93709156(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709220-93709221(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709239-93709240(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709263-93709264(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709302-93709303(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709336-93709337(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709363-93709364(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr14:93709399-93709400(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr14:93709430-93709431(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//27773536//22608085
chr14:93712248-93712249(-) m6A 3'UTR//CDS       24284625//27773535//22608085
chr14:93712257-93712258(-) m6A 3'UTR//CDS       24284625//27773535//22608085
chr14:93712337-93712338(-) m6A 3'UTR//CDS       24284625//24981863//27773535
chr14:93712404-93712405(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr14:93712507-93712508(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:93712526-93712527(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:93712546-93712547(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr14:93712569-93712570(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr14:93723634-93723635(-) m6A 3'UTR//CDS//exon       24981863
chr14:93723640-93723641(-) m6A 3'UTR//CDS//exon       24981863
chr14:93723664-93723665(-) m6A 3'UTR//CDS//exon       24981863
chr14:93723694-93723695(-) m6A 3'UTR//CDS//exon       24981863
chr14:93728014-93728015(-) m6A 3'UTR//CDS//exon//intron       27773535
chr14:93730167-93730168(-) m6A CDS//exon//intron       27773535
chr14:93730178-93730179(-) m6A CDS//exon//intron       27773535
chr14:93753998-93753999(-) m6A 3'UTR//intron       27773535
chr14:93754065-93754066(-) m6A 3'UTR//intron       24981863//27773535
chr14:93754174-93754175(-) m6A 3'UTR//intron       27773535
chr14:93754181-93754182(-) m6A 3'UTR//intron       27773535
chr14:93754260-93754261(-) m6A 3'UTR//intron       27773535
chr14:93754488-93754489(-) m6A 3'UTR//intron       27773535
chr14:93754505-93754506(-) m6A 3'UTR//intron       27773535
chr14:93754543-93754544(-) m6A 3'UTR//intron       27773535
chr14:93754580-93754581(-) m6A 3'UTR//intron       27773535
chr14:93754658-93754659(-) m6A 3'UTR//intron       24981863//27773535
chr14:93754667-93754668(-) m6A 3'UTR//intron       24981863//27773535
chr14:93754778-93754779(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr14:93754806-93754807(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754827-93754828(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754862-93754863(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754884-93754885(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754905-93754906(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754926-93754927(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754953-93754954(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93754973-93754974(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr14:93755007-93755008(-) m6A CDS//intron       24981863//27773535//22608085
chr14:93755047-93755048(-) m6A CDS//intron       27773535
chr14:93760249-93760250(-) m6A CDS//exon//intron       24981863//27773535//22608085
chr14:93760277-93760278(-) m6A CDS//exon//intron       24981863//27773535//22608085
chr14:93760352-93760353(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760440-93760441(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr14:93760449-93760450(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr14:93760454-93760455(-) m6A CDS//exon//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr14:93760473-93760474(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760562-93760563(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760591-93760592(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760598-93760599(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760648-93760649(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760680-93760681(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760733-93760734(-) m6A CDS//exon//intron       24284625//24981863//27773535//22575960//22608085
chr14:93760814-93760815(-) m6A CDS//exon//intron       24981863//22608085
chr14:93760860-93760861(-) m6A CDS//exon//intron       24284625//24981863//22608085
chr14:93760914-93760915(-) m6A CDS//exon//intron       24209618//24981863//22608085
chr14:93760931-93760932(-) m6A CDS//exon//intron       24209618//24981863//22608085
chr14:93760986-93760987(-) m6A CDS//intron       24981863//22608085
chr14:93760999-93761000(-) m6A CDS//intron       24981863//22608085
chr14:93761043-93761044(-) m6A CDS//intron       24981863//22608085
chr14:93761101-93761102(-) m6A CDS//intron       24981863//22608085
chr14:93762430-93762431(-) m6A 5'UTR//intron       24209618
chr14:93798681-93798682(-) m6A 5'UTR//intron       24209618
chr14:93799345-93799346(-) m6A 5'UTR       25456834//24981863//27371828//27773536
chr14:93799393-93799394(-) m6A 5'UTR       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-320b
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Exosome Pooled sera     27278097
Exosome Breast cancer cell line (MCF-7)     20976003
Exosome Ovarian follicular fluid     22116803
Exosome Plasma     23663360
Exosome Colon cancer cell line (LIM1863)     25330373
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Plasma     23077538
Microvesicle Seminal plasma     23539611
Microvesicle Hepatoma cells     23771658
Microvesicle Serum     24797360
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells|Urine     -
Mitochondrion Skeletal muscle myoblasts     21637849
Mitochondrion Cell line (HEK-293|HeLa)     22984580
Nucleus Breast adenocarcinoma cells (MCF-7)|Cervical adenocarcinoma cells (HeLa)     24918059
Nucleus Nasopharyngeal carcinoma cells     20498841
BTBD7
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleoplasm K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-320b
Eloxatine 5310940 Drug interaction    RC00007663
cis-Diaminedichloroplatinum 2767 Drug interaction    RC00007662
Benzene 241 Drug interaction    RC00007661
Marine fungal metabolite 1386A - Drug interaction    RC00007664
Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-320b
Topotecan       60700

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-320b
Interactor2: BTBD7

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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