Detail Information

Basic Information:


  VIRBase ID:  

HHID00068152

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-374b-3p:           ASXL1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-374b-3p ASXL1
miRBase
Accession/Entrez ID
MIMAT0004956 171023
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - BOPS//MDS

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ASXL1
chr20:30986860(+) A-I      intronic
chr20:30948735(+) A-I      intronic
chr20:30949269(+) A-I      intronic
chr20:30976082(+) A-I      intronic
chr20:30949265(+) A-I      intronic
chr20:30986854(+) A-I      intronic
chr20:30974989(+) A-I      intronic
chr20:30974988(+) A-I      intronic
chr20:30974907(+) A-I      intronic
chr20:30960841(+) A-I      intronic
chr20:30959478(+) A-I      intronic
chr20:30952194(+) A-I      intronic
chr20:30949262(+) A-I      intronic
chr20:30952164(+) A-I      intronic
chr20:30949285(+) A-I      intronic
chr20:30949276(+) A-I      intronic
chr20:31006085(+) A-I      intronic
chr20:31006064(+) A-I      intronic
chr20:31006060(+) A-I      intronic
chr20:30952180(+) A-I      intronic
chr20:31006054(+) A-I      intronic
chr20:30998755(+) A-I      intronic
chr20:30998747(+) A-I      intronic
chr20:30998682(+) A-I      intronic
chr20:30986943(+) A-I      intronic
chr20:30986935(+) A-I      intronic
chr20:30986920(+) A-I      intronic
chr20:30986903(+) A-I      intronic
chr20:30986870(+) A-I      intronic
chr20:30998795(+) A-I      intronic
chr20:30998776(+) A-I      intronic
chr20:30998671(+) A-I      intronic
chr20:30998577(+) A-I      intronic
chr20:30998205(+) A-I      intronic
chr20:30997509(+) A-I      intronic
chr20:30997467(+) A-I      intronic
chr20:30997462(+) A-I      intronic
chr20:30997421(+) A-I      intronic
chr20:30995340(+) A-I      intronic
chr20:30995327(+) A-I      intronic
chr20:30995314(+) A-I      intronic
chr20:30995092(+) A-I      intronic
chr20:30995059(+) A-I      intronic
chr20:30994916(+) A-I      intronic
chr20:30990086(+) A-I      intronic
chr20:30989621(+) A-I      intronic
chr20:30989452(+) A-I      intronic
chr20:30989407(+) A-I      intronic
chr20:30989398(+) A-I      intronic
chr20:30986969(+) A-I      intronic
chr20:30986874(+) A-I      intronic
chr20:30986861(+) A-I      intronic
chr20:30986851(+) A-I      intronic
chr20:30986763(+) A-I      intronic
chr20:30986688(+) A-I      intronic
chr20:30986686(+) A-I      intronic
chr20:30986493(+) A-I      intronic
chr20:30979459(+) A-I      intronic
chr20:30979458(+) A-I      intronic
chr20:30979386(+) A-I      intronic
chr20:30979367(+) A-I      intronic
chr20:30978876(+) A-I      intronic
chr20:30978803(+) A-I      intronic
chr20:30978794(+) A-I      intronic
chr20:30978791(+) A-I      intronic
chr20:30978760(+) A-I      intronic
chr20:30977560(+) A-I      intronic
chr20:30977469(+) A-I      intronic
chr20:30974957(+) A-I      intronic
chr20:30974956(+) A-I      intronic
chr20:30974951(+) A-I      intronic
chr20:30974940(+) A-I      intronic
chr20:30974904(+) A-I      intronic
chr20:30974864(+) A-I      intronic
chr20:30974442(+) A-I      intronic
chr20:30974307(+) A-I      intronic
chr20:30974244(+) A-I      intronic
chr20:30970554(+) A-I      intronic
chr20:30970530(+) A-I      intronic
chr20:30970300(+) A-I      intronic
chr20:30969268(+) A-I      intronic
chr20:30969226(+) A-I      intronic
chr20:30959139(+) A-I      intronic
chr20:30969072(+) A-I      intronic
chr20:30968567(+) A-I      intronic
chr20:30968460(+) A-I      intronic
chr20:30968356(+) A-I      intronic
chr20:30968349(+) A-I      intronic
chr20:30967991(+) A-I      intronic
chr20:30967920(+) A-I      intronic
chr20:30967903(+) A-I      intronic
chr20:30967884(+) A-I      intronic
chr20:30967852(+) A-I      intronic
chr20:30967649(+) A-I      intronic
chr20:30967549(+) A-I      intronic
chr20:30967535(+) A-I      intronic
chr20:30967453(+) A-I      intronic
chr20:30967443(+) A-I      intronic
chr20:30967117(+) A-I      intronic
chr20:30967091(+) A-I      intronic
chr20:30967011(+) A-I      intronic
chr20:30966091(+) A-I      intronic
chr20:30966076(+) A-I      intronic
chr20:30966003(+) A-I      intronic
chr20:30964371(+) A-I      intronic
chr20:30964318(+) A-I      intronic
chr20:30964214(+) A-I      intronic
chr20:30964207(+) A-I      intronic
chr20:30963265(+) A-I      intronic
chr20:30963177(+) A-I      intronic
chr20:30963074(+) A-I      intronic
chr20:30963073(+) A-I      intronic
chr20:30963019(+) A-I      intronic
chr20:30962918(+) A-I      intronic
chr20:30962905(+) A-I      intronic
chr20:30961519(+) A-I      intronic
chr20:30961512(+) A-I      intronic
chr20:30961474(+) A-I      intronic
chr20:30961399(+) A-I      intronic
chr20:30961145(+) A-I      intronic
chr20:30961101(+) A-I      intronic
chr20:30961100(+) A-I      intronic
chr20:30961074(+) A-I      intronic
chr20:30961073(+) A-I      intronic
chr20:30961069(+) A-I      intronic
chr20:30961059(+) A-I      intronic
chr20:30960802(+) A-I      intronic
chr20:30960578(+) A-I      intronic
chr20:30960563(+) A-I      intronic
chr20:30960537(+) A-I      intronic
chr20:30960531(+) A-I      intronic
chr20:30960478(+) A-I      intronic
chr20:30959567(+) A-I      intronic
chr20:30959483(+) A-I      intronic
chr20:30959439(+) A-I      intronic
chr20:30959358(+) A-I      intronic
chr20:30959218(+) A-I      intronic
chr20:30959193(+) A-I      intronic
chr20:30958874(+) A-I      intronic
chr20:30955108(+) A-I      intronic
chr20:30955104(+) A-I      intronic
chr20:30955103(+) A-I      intronic
chr20:30955095(+) A-I      intronic
chr20:30955065(+) A-I      intronic
chr20:30955033(+) A-I      intronic
chr20:30952221(+) A-I      intronic
chr20:30952210(+) A-I      intronic
chr20:30950450(+) A-I      intronic
chr20:30950276(+) A-I      intronic
chr20:30950267(+) A-I      intronic
chr20:30950252(+) A-I      intronic
chr20:30949693(+) A-I      intronic
chr20:30949661(+) A-I      intronic
chr20:30949391(+) A-I      intronic
chr20:30948797(+) A-I      intronic
chr20:30948730(+) A-I      intronic
chr20:30994895(+) A-I      intronic
chr20:31014613(+) A-I      intronic
chr20:31014604(+) A-I      intronic
chr20:31014463(+) A-I      intronic
chr20:31013708(+) A-I      intronic
chr20:31013553(+) A-I      intronic
chr20:31012248(+) A-I      intronic
chr20:31012179(+) A-I      intronic
chr20:31012178(+) A-I      intronic
chr20:31012176(+) A-I      intronic
chr20:31012173(+) A-I      intronic
chr20:31011410(+) A-I      intronic
chr20:31010587(+) A-I      intronic
chr20:31010573(+) A-I      intronic
chr20:31007241(+) A-I      intronic
chr20:31007118(+) A-I      intronic
chr20:31006700(+) A-I      intronic
chr20:31005593(+) A-I      intronic
chr20:30999580(+) A-I      intronic
chr20:30999538(+) A-I      intronic
chr20:30999481(+) A-I      intronic
chr20:30999462(+) A-I      intronic
chr20:30999445(+) A-I      intronic
chr20:30999197(+) A-I      intronic
chr20:30969147(+) A-I      intronic
chr20:30999082(+) A-I      intronic
chr20:30959606(+) A-I      3'UTR
chr20:30963091(+) A-I      intronic
chr20:31007754(+) A-I      intronic
chr20:30986783(+) A-I      intronic
chr20:30967509(+) A-I      intronic
chr20:30967087(+) A-I      intronic
chr20:30959215(+) A-I      intronic
chr20:30996495(+) A-I      intronic
chr20:30998756(+) A-I      intronic
chr20:31005844(+) A-I      intronic
chr20:30969945(+) A-I      intronic
chr20:30969149(+) A-I      intronic
chr20:30995870(+) A-I      intronic
chr20:30986842(+) A-I      intronic
chr20:30974362(+) A-I      intronic
chr20:30978940(+) A-I      intronic
chr20:30952470(+) A-I      intronic
chr20:31012136(+) A-I      intronic
chr20:31006769(+) A-I      intronic
chr20:30974324(+) A-I      intronic
chr20:31006094(+) A-I      intronic
chr20:30963615(+) A-I      intronic
chr20:30948812(+) A-I      intronic
chr20:30972227(+) A-I      intronic
chr20:30974360(+) A-I      intronic
chr20:30999502(+) A-I      intronic
chr20:30995858(+) A-I      intronic
chr20:30970577(+) A-I      intronic
chr20:30995998(+) A-I      intronic
chr20:30949347(+) A-I      intronic
chr20:30961060(+) A-I      intronic
chr20:30998672(+) A-I      intronic
chr20:30994150(+) A-I      intronic
chr20:30970442(+) A-I      intronic
chr20:30998656(+) A-I      intronic
chr20:30974441(+) A-I      intronic
chr20:30968406(+) A-I      intronic
chr20:30952204(+) A-I      intronic
chr20:30966814(+) A-I      intronic
chr20:30958738(+) A-I      intronic
chr20:31010483(+) A-I      intronic
chr20:30961033(+) A-I      intronic
chr20:31013770(+) A-I      intronic
chr20:30999160(+) A-I      intronic
chr20:30999621(+) A-I      intronic
chr20:30948772(+) A-I      intronic
chr20:30970388(+) A-I      intronic
chr20:30962174(+) A-I      intronic
chr20:30986588(+) A-I      intronic
chr20:30998563(+) A-I      intronic
chr20:30967492(+) A-I      intronic
chr20:30975036(+) A-I      intronic
chr20:30978820(+) A-I      intronic
chr20:30974404(+) A-I      intronic
chr20:31005647(+) A-I      intronic
chr20:30958720(+) A-I      intronic
chr20:30964244(+) A-I      intronic
chr20:30968532(+) A-I      intronic
chr20:30967081(+) A-I      intronic
chr20:31007600(+) A-I      intronic
chr20:30966850(+) A-I      intronic
chr20:30968487(+) A-I      intronic
chr20:30948733(+) A-I      intronic
chr20:30999095(+) A-I      intronic
chr20:31012217(+) A-I      intronic
chr20:30995396(+) A-I      intronic
chr20:31016678(+) A-I      intronic
chr20:30974962(+) A-I      intronic
chr20:30949280(+) A-I      intronic
chr20:30969109(+) A-I      intronic
chr20:30960924(+) A-I      intronic
chr20:30969815(+) A-I      intronic
chr20:30967113(+) A-I      intronic
chr20:30961940(+) A-I      intronic
chr20:30959441(+) A-I      intronic
chr20:30970498(+) A-I      intronic
chr20:30959607(+) A-I      3'UTR
chr20:30959643(+) A-I      3'UTR
chr20:30959631(+) A-I      3'UTR
chr20:30959617(+) A-I      3'UTR
chr20:30959616(+) A-I      3'UTR
chr20:30977554(+) A-I      intronic
chr20:31012064(+) A-I      intronic
chr20:30961628(+) A-I      intronic
chr20:30969188(+) A-I      intronic
chr20:30952281(+) A-I      intronic
chr20:30958781(+) A-I      intronic
chr20:30970541(+) A-I      intronic
chr20:30961968(+) A-I      intronic
chr20:30958941(+) A-I      intronic
chr20:30995088(+) A-I      intronic
chr20:30968373(+) A-I      intronic
chr20:30968481(+) A-I      intronic
chr20:31006729(+) A-I      intronic
chr20:30948942(+) A-I      intronic
chr20:30969058(+) A-I      intronic
chr20:30958833(+) A-I      intronic
chr20:30969075(+) A-I      intronic
chr20:30969839(+) A-I      intronic
chr20:30963589(+) A-I      intronic
chr20:30967285(+) A-I      intronic
chr20:30959278(+) A-I      intronic
chr20:30986594(+) A-I      intronic
chr20:30974958(+) A-I      intronic
chr20:30966841(+) A-I      intronic
chr20:30978723(+) A-I      intronic
chr20:30970482(+) A-I      intronic
chr20:31007242(+) A-I      intronic
chr20:30969876(+) A-I      intronic
chr20:31012218(+) A-I      intronic
chr20:30968478(+) A-I      intronic
chr20:30961505(+) A-I      intronic
chr20:30961592(+) A-I      intronic
chr20:30996381(+) A-I      intronic
chr20:30995805(+) A-I      intronic
chr20:30996374(+) A-I      intronic
chr20:30995880(+) A-I      intronic
chr20:30958829(+) A-I      intronic
chr20:30963234(+) A-I      intronic
chr20:30963566(+) A-I      intronic
chr20:30998123(+) A-I      intronic
chr20:30961950(+) A-I      intronic
chr20:30949294(+) A-I      intronic
chr20:31011541(+) A-I      intronic
chr20:30961890(+) A-I      intronic
chr20:31012076(+) A-I      intronic
chr20:30958782(+) A-I      intronic
chr20:30998646(+) A-I      intronic
chr20:30964142(+) A-I      intronic
chr20:30960524(+) A-I      intronic
chr20:30986893(+) A-I      intronic
chr20:30997419(+) A-I      intronic
chr20:30963095(+) A-I      intronic
chr20:30958843(+) A-I      intronic
chr20:30960670(+) A-I      intronic
chr20:30961837(+) A-I      intronic
chr20:30958721(+) A-I      intronic
chr20:30986894(+) A-I      intronic
chr20:30961549(+) A-I      intronic
chr20:30986786(+) A-I      intronic
chr20:30968400(+) A-I      intronic
chr20:30995026(+) A-I      intronic
chr20:30975024(+) A-I      intronic
chr20:30959277(+) A-I      intronic
chr20:31005726(+) A-I      intronic
chr20:31007054(+) A-I      intronic
chr20:30949793(+) A-I      intronic
chr20:30963014(+) A-I      intronic
chr20:30969987(+) A-I      intronic
chr20:30967616(+) A-I      intronic
chr20:30963105(+) A-I      intronic
chr20:30949062(+) A-I      intronic
chr20:30964276(+) A-I      intronic
chr20:31006128(+) A-I      intronic
chr20:30961567(+) A-I      intronic
chr20:30975021(+) A-I      intronic
chr20:30967088(+) A-I      intronic
chr20:31011089(+) A-I      intronic
chr20:30964313(+) A-I      intronic
chr20:30959473(+) A-I      intronic
chr20:30949188(+) A-I      intronic
chr20:30974980(+) A-I      intronic
chr20:30964253(+) A-I      intronic
chr20:30999283(+) A-I      intronic
chr20:30952148(+) A-I      intronic
chr20:30978327(+) A-I      intronic
chr20:30961523(+) A-I      intronic
chr20:30961879(+) A-I      intronic
chr20:30961420(+) A-I      intronic
chr20:30997486(+) A-I      intronic
chr20:30999424(+) A-I      intronic
chr20:30962059(+) A-I      intronic
chr20:30974430(+) A-I      intronic
chr20:30962011(+) A-I      intronic
chr20:30967419(+) A-I      intronic
chr20:30998731(+) A-I      intronic
chr20:30998713(+) A-I      intronic
chr20:30970576(+) A-I      intronic
chr20:31011469(+) A-I      intronic
chr20:30963650(+) A-I      intronic
chr20:30949709(+) A-I      intronic
chr20:30974331(+) A-I      intronic
chr20:30948833(+) A-I      intronic
chr20:30961392(+) A-I      intronic
chr20:30995126(+) A-I      intronic
chr20:30998723(+) A-I      intronic
chr20:30964262(+) A-I      intronic
chr20:30965050(+) A-I      intronic
chr20:30995020(+) A-I      intronic
chr20:30970509(+) A-I      intronic
chr20:30972136(+) A-I      intronic
chr20:30949187(+) A-I      intronic
chr20:30974902(+) A-I      intronic
chr20:30950318(+) A-I      intronic
chr20:30969898(+) A-I      intronic
chr20:30999474(+) A-I      intronic
chr20:30959472(+) A-I      intronic
chr20:30952118(+) A-I      intronic
chr20:30999211(+) A-I      intronic
chr20:30995883(+) A-I      intronic
chr20:30962158(+) A-I      intronic
chr20:31011290(+) A-I      intronic
chr20:30960970(+) A-I      intronic
chr20:30998714(+) A-I      intronic
chr20:30959201(+) A-I      intronic
chr20:30995804(+) A-I      intronic
chr20:30969134(+) A-I      intronic
chr20:31011172(+) A-I      intronic
chr20:30998679(+) A-I      intronic
chr20:30986964(+) A-I      intronic
chr20:30959509(+) A-I      intronic
chr20:30986785(+) A-I      intronic
chr20:30961509(+) A-I      intronic
chr20:30964158(+) A-I      intronic
chr20:30948734(+) A-I      intronic
chr20:30958888(+) A-I      intronic
chr20:30995771(+) A-I      intronic
chr20:30949231(+) A-I      intronic
chr20:30986056(+) A-I      intronic
chr20:30961414(+) A-I      intronic
chr20:30968006(+) A-I      intronic
chr20:30999094(+) A-I      intronic
chr20:30969033(+) A-I      intronic
chr20:30974321(+) A-I      intronic
chr20:30959206(+) A-I      intronic
chr20:30998695(+) A-I      intronic
chr20:30970052(+) A-I      intronic
chr20:31011472(+) A-I      intronic
chr20:30959144(+) A-I      intronic
chr20:30998655(+) A-I      intronic
chr20:30995780(+) A-I      intronic
chr20:31013743(+) A-I      intronic
chr20:31007190(+) A-I      intronic
chr20:30968403(+) A-I      intronic
chr20:30948717(+) A-I      intronic
chr20:30995129(+) A-I      intronic
chr20:30995107(+) A-I      intronic
chr20:30959189(+) A-I      intronic
chr20:30970389(+) A-I      intronic
chr20:30964279(+) A-I      intronic
chr20:30969048(+) A-I      intronic
chr20:30998698(+) A-I      intronic
chr20:30960960(+) A-I      intronic
chr20:30998648(+) A-I      intronic
chr20:30970360(+) A-I      intronic
chr20:30958817(+) A-I      intronic
chr20:30995040(+) A-I      intronic
chr20:30977409(+) A-I      intronic
chr20:30962850(+) A-I      intronic
chr20:30966792(+) A-I      intronic
chr20:30967127(+) A-I      intronic
chr20:30970319(+) A-I      intronic
chr20:30959222(+) A-I      intronic
chr20:30975002(+) A-I      intronic
chr20:30986857(+) A-I      intronic
chr20:30996011(+) A-I      intronic
chr20:31011454(+) A-I      intronic
chr20:30960842(+) A-I      intronic
chr20:30994890(+) A-I      intronic
chr20:31011316(+) A-I      intronic
chr20:31011126(+) A-I      intronic
chr20:30959467(+) A-I      intronic
chr20:30986942(+) A-I      intronic
chr20:30948824(+) A-I      intronic
chr20:30961591(+) A-I      intronic
chr20:30961029(+) A-I      intronic
chr20:30966824(+) A-I      intronic
chr20:30950360(+) A-I      intronic
chr20:30949321(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ASXL1
chr20:30974324(+) A-I intron -    21960545
chr20:30956815(+) C-A exon CDS    21725310
chr20:30949258(+) A-G intron -    22484847
chr20:30952281(+) A-G intron -    22484847
chr20:30966653(+) A-G intron -    22484847
chr20:30967616(+) A-G intron -    22484847
chr20:30968419(+) A-G intron -    22484847
chr20:30969058(+) A-G intron -    22484847
chr20:30986783(+) A-G intron -    22484847
chr20:30986831(+) A-G intron -    22484847
chr20:30998563(+) A-G intron -    22484847
chr20:31011126(+) A-G intron -    22484847
chr20:31013682(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ASXL1
chr20:30946160-30946161(+) m6A 5'UTR       24209618//25456834//24981863
chr20:30946453-30946454(+) m6A 5'UTR//intron       24209618
chr20:30946585-30946586(+) m6A CDS       24209618//25456834
chr20:30946596-30946597(+) m1A CDS       26863196//26863410
chr20:30947370-30947371(+) m6A 5'UTR//intron       24209618
chr20:30947397-30947398(+) m6A 5'UTR//intron       24209618
chr20:30947422-30947423(+) m6A 5'UTR//intron       24209618
chr20:30947454-30947455(+) m6A 5'UTR//intron       24209618
chr20:30947460-30947461(+) m6A 5'UTR//intron       24209618
chr20:30947500-30947501(+) Tm 5'UTR//intron       -
chr20:30947586-30947587(+) m6A CDS//intron       -
chr20:30954196-30954197(+) m6A 5'UTR//CDS//exon       24209618
chr20:30954224-30954225(+) m6A CDS//exon       24209618
chr20:30954254-30954255(+) m6A CDS//exon       24209618
chr20:30956821-30956822(+) m6A CDS//exon       24209618
chr20:30956892-30956893(+) m6A CDS//exon       24284625
chr20:30959606-30959607(+) m6A 3'UTR//intron       24284625
chr20:30959617-30959618(+) m6A 3'UTR//intron       24284625
chr20:31015988-31015989(+) m6A CDS//exon       24284625
chr20:31016057-31016058(+) m6A exon//intron       24284625
chr20:31016100-31016101(+) m6A exon//intron       24284625
chr20:31017814-31017815(+) m6A CDS//exon       24284625
chr20:31019164-31019165(+) m6A CDS//exon       24284625
chr20:31019218-31019219(+) m6A CDS//exon       24284625
chr20:31019279-31019280(+) m6A CDS//exon       24284625
chr20:31020746-31020747(+) m6A CDS//exon       24284625//24981863//27773535
chr20:31020772-31020773(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr20:31020782-31020783(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr20:31021252-31021253(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31021281-31021282(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31021293-31021294(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31021366-31021367(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31021484-31021485(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31021514-31021515(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31021540-31021541(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr20:31021554-31021555(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr20:31021559-31021560(+) Am CDS       -
chr20:31022254-31022255(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr20:31022339-31022340(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31022351-31022352(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31022361-31022362(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31022594-31022595(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31022645-31022646(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31022673-31022674(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31022728-31022729(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31022781-31022782(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31022819-31022820(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31022873-31022874(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31022926-31022927(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31022943-31022944(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31022993-31022994(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31023090-31023091(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023157-31023158(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023165-31023166(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023173-31023174(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023241-31023242(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023250-31023251(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023265-31023266(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:31023395-31023396(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31023450-31023451(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31023477-31023478(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31023549-31023550(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31023603-31023604(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31023616-31023617(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31023627-31023628(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31023680-31023681(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr20:31023936-31023937(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr20:31023987-31023988(+) m6A CDS       24284625//24981863//26404942//22575960//22608085
chr20:31024064-31024065(+) m6A CDS       24284625//24981863//22575960//22608085
chr20:31024189-31024190(+) m6A CDS       26404942//22608085
chr20:31024269-31024270(+) m6A CDS       26404942//22608085
chr20:31024325-31024326(+) m6A CDS       24284625//22575960//22608085
chr20:31024373-31024374(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr20:31024421-31024422(+) m1A CDS       26863196
chr20:31024476-31024477(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31024531-31024532(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31024542-31024543(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31024565-31024566(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31024578-31024579(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31024628-31024629(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31024665-31024666(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:31024696-31024697(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31024734-31024735(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:31024852-31024853(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31024950-31024951(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025101-31025102(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025160-31025161(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr20:31025386-31025387(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:31025431-31025432(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr20:31025451-31025452(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025458-31025459(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025507-31025508(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025731-31025732(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025777-31025778(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025798-31025799(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025850-31025851(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31025920-31025921(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr20:31026324-31026325(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr20:31026559-31026560(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31026575-31026576(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31026627-31026628(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr20:31026951-31026952(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:31026958-31026959(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:31026970-31026971(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:31027002-31027003(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:31027012-31027013(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:31027099-31027100(+) m6A 3'UTR       24284625//24981863//22608085
chr20:31027106-31027107(+) m6A 3'UTR       24284625//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-374b-3p
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Colon cancer cell line (LIM1863)|Fibroblasts|Mesenchymal stem cells     -
ASXL1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-374b-3p
Interactor2: ASXL1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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