Detail Information

Basic Information:


  VIRBase ID:  

HHID00067519

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-616-3p:           KMT2A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-616-3p KMT2A
miRBase
Accession/Entrez ID
MIMAT0004805 4297
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - ALL-1//CXXC7//HRX//HTRX1//MLL//MLL1//MLL1A//TRX1//WDSTS

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-616-3p
rs374321661 chr12:57519192    C/T
rs573303396 chr12:57519190    A/C
rs573303396 chr12:57519190    A/G
rs760442491 chr12:57519183    C/T
rs763282175 chr12:57519193    C/T
rs768469143 chr12:57519184    T/C
rs776483081 chr12:57519185    G/A
rs368928238 chr12:57519199    A/G
rs377525107 chr12:57519198    A/C
rs755336783 chr12:57519200    T/C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KMT2A
chr11:118320198(+) A-I      intronic
chr11:118320194(+) A-I      intronic
chr11:118320180(+) A-I      intronic
chr11:118320227(+) A-I      intronic
chr11:118320250(+) A-I      intronic
chr11:118347110(+) A-I      intronic
chr11:118330434(+) A-I      intronic
chr11:118320018(+) A-I      intronic
chr11:118347179(+) A-I      intronic
chr11:118383698(+) A-I      intronic
chr11:118322445(+) A-I      intronic
chr11:118383879(+) A-I      intronic
chr11:118345701(+) A-I      intronic
chr11:118315564(+) A-I      intronic
chr11:118328849(+) A-I      intronic
chr11:118389647(+) A-I      intronic
chr11:118383903(+) A-I      intronic
chr11:118315392(+) A-I      intronic
chr11:118389713(+) A-I      intronic
chr11:118389477(+) A-I      intronic
chr11:118315374(+) A-I      intronic
chr11:118315393(+) A-I      intronic
chr11:118315567(+) A-I      intronic
chr11:118316824(+) A-I      intronic
chr11:118316835(+) A-I      intronic
chr11:118316839(+) A-I      intronic
chr11:118316854(+) A-I      intronic
chr11:118316921(+) A-I      intronic
chr11:118385478(+) A-I      intronic
chr11:118317076(+) A-I      intronic
chr11:118322777(+) A-I      intronic
chr11:118323118(+) A-I      intronic
chr11:118323151(+) A-I      intronic
chr11:118323428(+) A-I      intronic
chr11:118323429(+) A-I      intronic
chr11:118323474(+) A-I      intronic
chr11:118323609(+) A-I      intronic
chr11:118326834(+) A-I      intronic
chr11:118316460(+) A-I      intronic
chr11:118326951(+) A-I      intronic
chr11:118326960(+) A-I      intronic
chr11:118330502(+) A-I      intronic
chr11:118328878(+) A-I      intronic
chr11:118328899(+) A-I      intronic
chr11:118328911(+) A-I      intronic
chr11:118331073(+) A-I      intronic
chr11:118328916(+) A-I      intronic
chr11:118329809(+) A-I      intronic
chr11:118330436(+) A-I      intronic
chr11:118331054(+) A-I      intronic
chr11:118331120(+) A-I      intronic
chr11:118331177(+) A-I      intronic
chr11:118331201(+) A-I      intronic
chr11:118316976(+) A-I      intronic
chr11:118335176(+) A-I      intronic
chr11:118332769(+) A-I      intronic
chr11:118335113(+) A-I      intronic
chr11:118345620(+) A-I      intronic
chr11:118345630(+) A-I      intronic
chr11:118345733(+) A-I      intronic
chr11:118345750(+) A-I      intronic
chr11:118346317(+) A-I      intronic
chr11:118346646(+) A-I      intronic
chr11:118348490(+) A-I      intronic
chr11:118379252(+) A-I      intronic
chr11:118383946(+) A-I      intronic
chr11:118384398(+) A-I      intronic
chr11:118384444(+) A-I      intronic
chr11:118385600(+) A-I      intronic
chr11:118386549(+) A-I      intronic
chr11:118389234(+) A-I      intronic
chr11:118389241(+) A-I      intronic
chr11:118389249(+) A-I      intronic
chr11:118332768(+) A-I      intronic
chr11:118323235(+) A-I      intronic
chr11:118384586(+) A-I      intronic
chr11:118323232(+) A-I      intronic
chr11:118386504(+) A-I      intronic
chr11:118385405(+) A-I      intronic
chr11:118322483(+) A-I      intronic
chr11:118323425(+) A-I      intronic
chr11:118335129(+) A-I      intronic
chr11:118328983(+) A-I      intronic
chr11:118316631(+) A-I      intronic
chr11:118315525(+) A-I      intronic
chr11:118337637(+) A-I      intronic
chr11:118322413(+) A-I      intronic
chr11:118385744(+) A-I      intronic
chr11:118353709(+) A-I      intronic
chr11:118386533(+) A-I      intronic
chr11:118338013(+) A-I      intronic
chr11:118384592(+) A-I      intronic
chr11:118332703(+) A-I      intronic
chr11:118316640(+) A-I      intronic
chr11:118337934(+) A-I      intronic
chr11:118389419(+) A-I      intronic
chr11:118386583(+) A-I      intronic
chr11:118388459(+) A-I      intronic
chr11:118385313(+) A-I      intronic
chr11:118316953(+) A-I      intronic
chr11:118384549(+) A-I      intronic
chr11:118384573(+) A-I      intronic
chr11:118311961(+) A-I      intronic
chr11:118336963(+) A-I      intronic
chr11:118388644(+) A-I      intronic
chr11:118315434(+) A-I      intronic
chr11:118316985(+) A-I      intronic
chr11:118316917(+) A-I      intronic
chr11:118385187(+) A-I      intronic
chr11:118353651(+) A-I      intronic
chr11:118315582(+) A-I      intronic
chr11:118385371(+) A-I      intronic
chr11:118330505(+) A-I      intronic
chr11:118332688(+) A-I      intronic
chr11:118330519(+) A-I      intronic
chr11:118326950(+) A-I      intronic
chr11:118328924(+) A-I      intronic
chr11:118384541(+) A-I      intronic
chr11:118388567(+) A-I      intronic
chr11:118329825(+) A-I      intronic
chr11:118323166(+) A-I      intronic
chr11:118322987(+) A-I      intronic
chr11:118388562(+) A-I      intronic
chr11:118331224(+) A-I      intronic
chr11:118384608(+) A-I      intronic
chr11:118323234(+) A-I      intronic
chr11:118328917(+) A-I      intronic
chr11:118323475(+) A-I      intronic
chr11:118338012(+) A-I      intronic
chr11:118329038(+) A-I      intronic
chr11:118383871(+) A-I      intronic
chr11:118328830(+) A-I      intronic
chr11:118315428(+) A-I      intronic
chr11:118323126(+) A-I      intronic
chr11:118330576(+) A-I      intronic
chr11:118383884(+) A-I      intronic
chr11:118327255(+) A-I      intronic
chr11:118335004(+) A-I      intronic
chr11:118323068(+) A-I      intronic
chr11:118322989(+) A-I      intronic
chr11:118323019(+) A-I      intronic
chr11:118315537(+) A-I      intronic
chr11:118388436(+) A-I      intronic
chr11:118330535(+) A-I      intronic
chr11:118335175(+) A-I      intronic
chr11:118330630(+) A-I      intronic
chr11:118321944(+) A-I      intronic
chr11:118383838(+) A-I      intronic
chr11:118385347(+) A-I      intronic
chr11:118328986(+) A-I      intronic
chr11:118347175(+) A-I      intronic
chr11:118316914(+) A-I      intronic
chr11:118388561(+) A-I      intronic
chr11:118329039(+) A-I      intronic
chr11:118335050(+) A-I      intronic
chr11:118386650(+) A-I      intronic
chr11:118323167(+) A-I      intronic
chr11:118383692(+) A-I      intronic
chr11:118346291(+) A-I      intronic
chr11:118386641(+) A-I      intronic
chr11:118386545(+) A-I      intronic
chr11:118337086(+) A-I      intronic
chr11:118326819(+) A-I      intronic
chr11:118316899(+) A-I      intronic
chr11:118316944(+) A-I      intronic
chr11:118384505(+) A-I      intronic
chr11:118316831(+) A-I      intronic
chr11:118384602(+) A-I      intronic
chr11:118330672(+) A-I      intronic
chr11:118323140(+) A-I      intronic
chr11:118315472(+) A-I      intronic
chr11:118384410(+) A-I      intronic
chr11:118327077(+) A-I      intronic
chr11:118384445(+) A-I      intronic
chr11:118331097(+) A-I      intronic
chr11:118329070(+) A-I      intronic
chr11:118335171(+) A-I      intronic
chr11:118326953(+) A-I      intronic
chr11:118315455(+) A-I      intronic
chr11:118337146(+) A-I      intronic
chr11:118316937(+) A-I      intronic
chr11:118315389(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KMT2A
chr11:118309768-118309769(+) m6A CDS//intron       -
chr11:118309795-118309796(+) m6A CDS//intron       -
chr11:118309800-118309801(+) m6A CDS//intron       -
chr11:118318366-118318367(+) m6A CDS//intron       24209618
chr11:118320418-118320419(+) m6A 3'UTR//intron       22608085
chr11:118320564-118320565(+) m6A 3'UTR//intron       22608085
chr11:118320584-118320585(+) m6A 3'UTR//intron       22608085
chr11:118342381-118342382(+) m6A CDS//intron       24284625
chr11:118342395-118342396(+) m6A CDS//intron       24284625
chr11:118342407-118342408(+) m6A CDS//intron       24284625
chr11:118342483-118342484(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342545-118342546(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342592-118342593(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342616-118342617(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342648-118342649(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342704-118342705(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342732-118342733(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342813-118342814(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342842-118342843(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342871-118342872(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342882-118342883(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118342909-118342910(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118342920-118342921(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118342972-118342973(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118343074-118343075(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118343143-118343144(+) m6A CDS//intron       24284625//22608085
chr11:118343297-118343298(+) m6A CDS//intron       24284625//22608085
chr11:118343339-118343340(+) m6A CDS//intron       24284625//22608085
chr11:118343542-118343543(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118343715-118343716(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118343731-118343732(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118343808-118343809(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118344251-118344252(+) m6A CDS//intron       24284625//24981863
chr11:118344318-118344319(+) m6A CDS//intron       24284625//24981863//22608085
chr11:118344331-118344332(+) m6A CDS//intron       24284625//22608085
chr11:118344406-118344407(+) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085
chr11:118344428-118344429(+) m6A CDS//intron       24284625//25456834//24981863//27773535//22575960//22608085
chr11:118344485-118344486(+) m6A CDS//intron       24284625//25456834//24981863//27773535//22608085
chr11:118344503-118344504(+) m6A CDS//intron       24284625//25456834//24981863//27773535//22608085
chr11:118344700-118344701(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr11:118344745-118344746(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr11:118344787-118344788(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr11:118344797-118344798(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr11:118344835-118344836(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085
chr11:118344873-118344874(+) m6A CDS//intron       24284625//24209618//24981863//22608085
chr11:118344914-118344915(+) m6A CDS       24284625//24209618//24981863//22608085
chr11:118345005-118345006(+) m6A CDS       24284625//22608085
chr11:118352458-118352459(+) m6A CDS       24981863//27773535
chr11:118352474-118352475(+) m6A CDS       24981863//27773535
chr11:118352510-118352511(+) m6A CDS       24981863
chr11:118352523-118352524(+) m6A CDS       24981863
chr11:118352612-118352613(+) m1A CDS       26863410
chr11:118352646-118352647(+) m6A CDS       24284625//22575960
chr11:118352733-118352734(+) m6A CDS//exon       24284625//24981863
chr11:118352758-118352759(+) m6A CDS//exon       24284625//24981863//27773535//22608085
chr11:118353152-118353153(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118353191-118353192(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118353197-118353198(+) m6A CDS//intron       24284625//24981863//27773535//22608085
chr11:118354902-118354903(+) m6A CDS//exon       24284625//24981863//27773535//22608085
chr11:118354943-118354944(+) m6A CDS//exon       24284625//24981863
chr11:118365061-118365062(+) m6A CDS       24981863
chr11:118366491-118366492(+) m6A CDS       24981863
chr11:118366543-118366544(+) m6A CDS       24284625//24981863
chr11:118366561-118366562(+) m6A CDS       24284625//24981863
chr11:118366566-118366567(+) m6A CDS       24284625//24981863
chr11:118366996-118366997(+) m6A CDS       24284625//24981863
chr11:118367011-118367012(+) m6A CDS       24284625//24981863
chr11:118372514-118372515(+) m6A CDS//exon       24284625
chr11:118373173-118373174(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr11:118373233-118373234(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118373258-118373259(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118373309-118373310(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118373391-118373392(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118373420-118373421(+) m6A CDS//exon       24284625//25456834//24981863//22575960//22608085
chr11:118373445-118373446(+) m6A CDS//exon       24284625//25456834//24981863//22608085
chr11:118373499-118373500(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr11:118373537-118373538(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373605-118373606(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr11:118373641-118373642(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr11:118373674-118373675(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr11:118373754-118373755(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373784-118373785(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373816-118373817(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373863-118373864(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373893-118373894(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373921-118373922(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373959-118373960(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118373991-118373992(+) m6A CDS//exon       24284625//24981863//22608085
chr11:118374286-118374287(+) m6A CDS       24284625//24981863//22608085
chr11:118374399-118374400(+) m6A CDS       24284625//22608085
chr11:118374405-118374406(+) m6A CDS       24284625//22608085
chr11:118374430-118374431(+) m6A CDS       22608085
chr11:118374546-118374547(+) m6A CDS       24284625//24981863//22608085
chr11:118374604-118374605(+) m6A CDS       24284625//24981863//22608085
chr11:118374674-118374675(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118374736-118374737(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118374785-118374786(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118374863-118374864(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118374870-118374871(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118374886-118374887(+) m6A CDS       24284625//24981863//27773535//22608085
chr11:118374910-118374911(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr11:118374986-118374987(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118374994-118374995(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118375080-118375081(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375116-118375117(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375158-118375159(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375167-118375168(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375234-118375235(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375284-118375285(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375330-118375331(+) m6A CDS       24284625//22608085
chr11:118375372-118375373(+) m6A CDS       24284625//22608085
chr11:118375459-118375460(+) m6A CDS       24284625//24981863//22608085
chr11:118375476-118375477(+) m6A CDS       24284625//24981863//22608085
chr11:118375606-118375607(+) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr11:118375620-118375621(+) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr11:118375689-118375690(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375743-118375744(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375811-118375812(+) m6A CDS       24284625//24981863//22608085
chr11:118375846-118375847(+) m6A CDS       24284625//24981863//22608085
chr11:118375866-118375867(+) m6A CDS       24284625//24981863//22608085
chr11:118375892-118375893(+) m6A CDS       24284625//24981863//22608085
chr11:118375964-118375965(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118375984-118375985(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118376017-118376018(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118376142-118376143(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118376228-118376229(+) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr11:118376266-118376267(+) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr11:118376278-118376279(+) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085
chr11:118376297-118376298(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr11:118376314-118376315(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr11:118376340-118376341(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr11:118376456-118376457(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr11:118376506-118376507(+) m6A CDS       24284625//24981863//22608085
chr11:118376540-118376541(+) m6A CDS       24284625//24981863//22608085
chr11:118376657-118376658(+) m6A CDS       24284625
chr11:118376695-118376696(+) m6A CDS       24284625
chr11:118376796-118376797(+) m6A CDS       24284625//24981863//22608085
chr11:118376846-118376847(+) m6A CDS       24284625//24981863//22608085
chr11:118376855-118376856(+) m6A CDS       24284625//24981863//22608085
chr11:118376915-118376916(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118376959-118376960(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118376982-118376983(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118377002-118377003(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr11:118377097-118377098(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118377108-118377109(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118377181-118377182(+) m6A CDS       24284625//24981863//22575960//22608085
chr11:118377220-118377221(+) m6A CDS       24284625//22575960//22608085
chr11:118377226-118377227(+) m6A CDS       24284625//22575960//22608085
chr11:118377233-118377234(+) m6A CDS       24284625//22575960//22608085
chr11:118377258-118377259(+) m6A CDS       24284625//25456834//22608085
chr11:118377299-118377300(+) m6A CDS//exon       25456834
chr11:118377327-118377328(+) m6A CDS//exon       25456834//22575960
chr11:118378350-118378351(+) m6A exon//intron       24284625//24981863//22575960
chr11:118390710-118390711(+) m6A CDS//exon       -
chr11:118390810-118390811(+) m6A exon//intron       -
chr11:118392040-118392041(+) m6A CDS//exon       -
chr11:118392099-118392100(+) m6A CDS//exon       -
chr11:118392793-118392794(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085
chr11:118392882-118392883(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118393044-118393045(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118393066-118393067(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:118393164-118393165(+) m6A 3'UTR       24284625//25456834//22575960//22608085
chr11:118395090-118395091(+) m6A 3'UTR       24284625//24981863//22608085
chr11:118395148-118395149(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr11:118395172-118395173(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr11:118395232-118395233(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr11:118395267-118395268(+) m6A 3'UTR       24284625//25456834//24981863
chr11:118395290-118395291(+) m6A 3'UTR       24284625//25456834
chr11:118395321-118395322(+) m6A 3'UTR       -
chr11:118395841-118395842(+) m6A 3'UTR       24284625//25456834//22608085
chr11:118395972-118395973(+) m6A 3'UTR       24284625//25456834//22608085
chr11:118396023-118396024(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr11:118396104-118396105(+) m6A 3'UTR       24284625//25456834//24981863//22608085
chr11:118396220-118396221(+) m6A 3'UTR       24284625//24981863//22608085
chr11:118396234-118396235(+) m6A 3'UTR       24284625//24981863//22608085
chr11:118396266-118396267(+) m6A 3'UTR       24284625//24981863//22608085
chr11:118396402-118396403(+) m6A 3'UTR       24981863
chr11:118397418-118397419(+) m6A 3'UTR       24981863//27773535//22608085
chr11:118397471-118397472(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-616-3p
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
KMT2A
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-616-3p
Interactor2: KMT2A

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

Starting a new search, please wait ...