Detail Information

Basic Information:


  VIRBase ID:  

HHID00066777

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-146b-3p:           NIN:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-146b-3p NIN
miRBase
Accession/Entrez ID
MIMAT0004766 51199
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - SCKL7

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-146b-3p
rs1367942461 chr10:102436557    G/A
rs1467375133 chr10:102436569    C/A
rs766852690 chr10:102436575    TGGTGCCC/T
rs768018523 chr10:102436577    G/C
rs1425832655 chr10:102436558    C/T
rs944616447 chr10:102436564    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NIN
chr14:51213829(-) A-I      intronic
chr14:51257250(-) A-I      intronic
chr14:51213839(-) A-I      intronic
chr14:51270742(-) A-I      intronic
chr14:51213824(-) A-I      intronic
chr14:51213810(-) A-I      intronic
chr14:51209029(-) A-I      ncRNA
chr14:51209007(-) A-I      ncRNA
chr14:51268016(-) A-I      intronic
chr14:51285033(-) A-I      intronic
chr14:51262610(-) A-I      intronic
chr14:51284997(-) A-I      intronic
chr14:51199724(-) A-I      intronic
chr14:51284995(-) A-I      intronic
chr14:51284929(-) A-I      intronic
chr14:51213815(-) A-I      intronic
chr14:51284919(-) A-I      intronic
chr14:51284518(-) A-I      intronic
chr14:51284701(-) A-I      intronic
chr14:51266581(-) A-I      intronic
chr14:51262614(-) A-I      intronic
chr14:51284783(-) A-I      intronic
chr14:51267625(-) A-I      intronic
chr14:51284698(-) A-I      intronic
chr14:51284680(-) A-I      intronic
chr14:51265635(-) A-I      intronic
chr14:51213718(-) A-I      intronic
chr14:51284530(-) A-I      intronic
chr14:51267561(-) A-I      intronic
chr14:51269940(-) A-I      intronic
chr14:51284519(-) A-I      intronic
chr14:51265629(-) A-I      intronic
chr14:51278756(-) A-I      intronic
chr14:51265618(-) A-I      intronic
chr14:51213712(-) A-I      intronic
chr14:51200014(-) A-I      intronic
chr14:51198385(-) A-I      intronic
chr14:51267566(-) A-I      intronic
chr14:51211493(-) A-I      intronic
chr14:51211386(-) A-I      intronic
chr14:51265569(-) A-I      intronic
chr14:51265586(-) A-I      intronic
chr14:51256163(-) A-I      intronic
chr14:51278655(-) A-I      intronic
chr14:51277609(-) A-I      intronic
chr14:51278628(-) A-I      intronic
chr14:51209376(-) A-I      intronic
chr14:51267986(-) A-I      intronic
chr14:51265573(-) A-I      intronic
chr14:51198068(-) A-I      intronic
chr14:51278600(-) A-I      intronic
chr14:51278106(-) A-I      intronic
chr14:51198166(-) A-I      intronic
chr14:51278028(-) A-I      intronic
chr14:51198311(-) A-I      intronic
chr14:51278427(-) A-I      intronic
chr14:51209259(-) A-I      intronic
chr14:51269902(-) A-I      intronic
chr14:51268002(-) A-I      intronic
chr14:51277586(-) A-I      intronic
chr14:51269865(-) A-I      intronic
chr14:51284572(-) A-I      intronic
chr14:51268067(-) A-I      intronic
chr14:51268010(-) A-I      intronic
chr14:51198371(-) A-I      intronic
chr14:51266526(-) A-I      intronic
chr14:51277517(-) A-I      intronic
chr14:51277175(-) A-I      intronic
chr14:51276867(-) A-I      intronic
chr14:51262535(-) A-I      intronic
chr14:51276862(-) A-I      intronic
chr14:51276837(-) A-I      intronic
chr14:51278030(-) A-I      intronic
chr14:51276827(-) A-I      intronic
chr14:51276760(-) A-I      intronic
chr14:51199538(-) A-I      intronic
chr14:51276724(-) A-I      intronic
chr14:51278452(-) A-I      intronic
chr14:51270866(-) A-I      intronic
chr14:51270794(-) A-I      intronic
chr14:51270682(-) A-I      intronic
chr14:51198368(-) A-I      intronic
chr14:51277622(-) A-I      intronic
chr14:51270785(-) A-I      intronic
chr14:51201683(-) A-I      intronic
chr14:51209925(-) A-I      intronic
chr14:51270781(-) A-I      intronic
chr14:51270783(-) A-I      intronic
chr14:51209240(-) A-I      intronic
chr14:51284571(-) A-I      intronic
chr14:51262533(-) A-I      intronic
chr14:51265676(-) A-I      intronic
chr14:51265758(-) A-I      intronic
chr14:51267988(-) A-I      intronic
chr14:51214340(-) A-I      intronic
chr14:51270774(-) A-I      intronic
chr14:51278426(-) A-I      intronic
chr14:51266666(-) A-I      intronic
chr14:51270025(-) A-I      intronic
chr14:51256203(-) A-I      intronic
chr14:51267593(-) A-I      intronic
chr14:51270024(-) A-I      intronic
chr14:51199543(-) A-I      intronic
chr14:51262589(-) A-I      intronic
chr14:51256142(-) A-I      intronic
chr14:51265670(-) A-I      intronic
chr14:51265612(-) A-I      intronic
chr14:51201533(-) A-I      intronic
chr14:51265665(-) A-I      intronic
chr14:51265661(-) A-I      intronic
chr14:51249935(-) A-I      intronic
chr14:51269989(-) A-I      intronic
chr14:51267985(-) A-I      intronic
chr14:51284613(-) A-I      intronic
chr14:51201083(-) A-I      intronic
chr14:51265637(-) A-I      intronic
chr14:51201005(-) A-I      intronic
chr14:51249934(-) A-I      intronic
chr14:51200012(-) A-I      intronic
chr14:51199699(-) A-I      intronic
chr14:51236492(-) A-I      intronic
chr14:51267991(-) A-I      intronic
chr14:51270842(-) A-I      intronic
chr14:51269960(-) A-I      intronic
chr14:51249915(-) A-I      intronic
chr14:51198487(-) A-I      intronic
chr14:51249905(-) A-I      intronic
chr14:51214455(-) A-I      intronic
chr14:51214376(-) A-I      intronic
chr14:51214366(-) A-I      intronic
chr14:51268036(-) A-I      intronic
chr14:51265673(-) A-I      intronic
chr14:51208989(-) A-I      ncRNA
chr14:51208968(-) A-I      ncRNA
chr14:51209034(-) A-I      ncRNA
chr14:51209005(-) A-I      ncRNA
chr14:51208884(-) A-I      ncRNA
chr14:51208940(-) A-I      ncRNA
chr14:51208929(-) A-I      ncRNA
chr14:51209017(-) A-I      ncRNA
chr14:51198297(-) A-I      intronic
chr14:51204503(-) A-I      intronic
chr14:51276886(-) A-I      intronic
chr14:51268100(-) A-I      intronic
chr14:51262578(-) A-I      intronic
chr14:51266569(-) A-I      intronic
chr14:51270758(-) A-I      intronic
chr14:51262566(-) A-I      intronic
chr14:51266504(-) A-I      intronic
chr14:51266571(-) A-I      intronic
chr14:51265667(-) A-I      intronic
chr14:51265564(-) A-I      intronic
chr14:51201677(-) A-I      intronic
chr14:51213704(-) A-I      intronic
chr14:51209250(-) A-I      intronic
chr14:51277167(-) A-I      intronic
chr14:51198137(-) A-I      intronic
chr14:51256206(-) A-I      intronic
chr14:51265645(-) A-I      intronic
chr14:51284941(-) A-I      intronic
chr14:51214195(-) A-I      intronic
chr14:51266646(-) A-I      intronic
chr14:51270738(-) A-I      intronic
chr14:51265700(-) A-I      intronic
chr14:51270788(-) A-I      intronic
chr14:51269964(-) A-I      intronic
chr14:51199703(-) A-I      intronic
chr14:51268055(-) A-I      intronic
chr14:51209260(-) A-I      intronic
chr14:51267598(-) A-I      intronic
chr14:51213701(-) A-I      intronic
chr14:51270808(-) A-I      intronic
chr14:51209208(-) A-I      intronic
chr14:51284729(-) A-I      intronic
chr14:51201676(-) A-I      intronic
chr14:51213734(-) A-I      intronic
chr14:51266610(-) A-I      intronic
chr14:51201460(-) A-I      intronic
chr14:51284707(-) A-I      intronic
chr14:51269988(-) A-I      intronic
chr14:51278373(-) A-I      intronic
chr14:51270782(-) A-I      intronic
chr14:51278726(-) A-I      intronic
chr14:51199584(-) A-I      intronic
chr14:51199700(-) A-I      intronic
chr14:51213868(-) A-I      intronic
chr14:51284797(-) A-I      intronic
chr14:51213794(-) A-I      intronic
chr14:51201495(-) A-I      intronic
chr14:51270706(-) A-I      intronic
chr14:51266611(-) A-I      intronic
chr14:51236056(-) A-I      intronic
chr14:51267670(-) A-I      intronic
chr14:51213748(-) A-I      intronic
chr14:51284785(-) A-I      intronic
chr14:51270687(-) A-I      intronic
chr14:51284539(-) A-I      intronic
chr14:51269890(-) A-I      intronic
chr14:51198340(-) A-I      intronic
chr14:51209244(-) A-I      intronic
chr14:51267780(-) A-I      intronic
chr14:51198517(-) A-I      intronic
chr14:51265721(-) A-I      intronic
chr14:51267779(-) A-I      intronic
chr14:51267609(-) A-I      intronic
chr14:51236380(-) A-I      intronic
chr14:51213789(-) A-I      intronic
chr14:51200055(-) A-I      intronic
chr14:51200870(-) A-I      intronic
chr14:51198510(-) A-I      intronic
chr14:51192377(-) A-I      intronic
chr14:51201082(-) A-I      intronic
chr14:51262635(-) A-I      intronic
chr14:51278059(-) A-I      intronic
chr14:51270752(-) A-I      intronic
chr14:51201629(-) A-I      intronic
chr14:51214328(-) A-I      intronic
chr14:51267924(-) A-I      intronic
chr14:51199570(-) A-I      intronic
chr14:51284883(-) A-I      intronic
chr14:51284627(-) A-I      intronic
chr14:51256213(-) A-I      intronic
chr14:51267665(-) A-I      intronic
chr14:51214226(-) A-I      intronic
chr14:51214369(-) A-I      intronic
chr14:51277484(-) A-I      intronic
chr14:51278100(-) A-I      intronic
chr14:51252693(-) A-I      intronic
chr14:51269904(-) A-I      intronic
chr14:51265690(-) A-I      intronic
chr14:51192381(-) A-I      intronic
chr14:51199755(-) A-I      intronic
chr14:51284994(-) A-I      intronic
chr14:51267695(-) A-I      intronic
chr14:51266520(-) A-I      intronic
chr14:51213823(-) A-I      intronic
chr14:51209778(-) A-I      intronic
chr14:51278478(-) A-I      intronic
chr14:51198492(-) A-I      intronic
chr14:51265679(-) A-I      intronic
chr14:51270019(-) A-I      intronic
chr14:51266654(-) A-I      intronic
chr14:51266523(-) A-I      intronic
chr14:51284852(-) A-I      intronic
chr14:51199548(-) A-I      intronic
chr14:51270057(-) A-I      intronic
chr14:51265722(-) A-I      intronic
chr14:51267493(-) A-I      intronic
chr14:51284637(-) A-I      intronic
chr14:51266455(-) A-I      intronic
chr14:51214230(-) A-I      intronic
chr14:51213796(-) A-I      intronic
chr14:51213682(-) A-I      intronic
chr14:51266659(-) A-I      intronic
chr14:51198125(-) A-I      intronic
chr14:51262621(-) A-I      intronic
chr14:51201473(-) A-I      intronic
chr14:51197991(-) A-I      intronic
chr14:51209338(-) A-I      intronic
chr14:51284657(-) A-I      intronic
chr14:51284496(-) A-I      intronic
chr14:51198432(-) A-I      intronic
chr14:51265701(-) A-I      intronic
chr14:51267684(-) A-I      intronic
chr14:51270762(-) A-I      intronic
chr14:51256858(-) A-I      intronic
chr14:51267905(-) A-I      intronic
chr14:51284562(-) A-I      intronic
chr14:51268004(-) A-I      intronic
chr14:51214456(-) A-I      intronic
chr14:51270683(-) A-I      intronic
chr14:51266535(-) A-I      intronic
chr14:51268084(-) A-I      intronic
chr14:51268082(-) A-I      intronic
chr14:51198388(-) A-I      intronic
chr14:51200044(-) A-I      intronic
chr14:51262575(-) A-I      intronic
chr14:51262573(-) A-I      intronic
chr14:51265674(-) A-I      intronic
chr14:51199567(-) A-I      intronic
chr14:51284893(-) A-I      intronic
chr14:51266647(-) A-I      intronic
chr14:51266593(-) A-I      intronic
chr14:51278455(-) A-I      intronic
chr14:51270797(-) A-I      intronic
chr14:51270719(-) A-I      intronic
chr14:51277153(-) A-I      intronic
chr14:51265675(-) A-I      intronic
chr14:51222474(-) A-I      intronic
chr14:51266465(-) A-I      intronic
chr14:51277415(-) A-I      intronic
chr14:51277585(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NIN
chr14:51270797(-) A-I intron -    22327324
chr14:51209017(-) A-G intron -    22484847
chr14:51209250(-) A-G intron -    22484847
chr14:51209259(-) A-G intron -    22484847
chr14:51209260(-) A-G intron -    22484847
chr14:51213868(-) A-G intron -    22484847
chr14:51266504(-) A-G intron -    22484847
chr14:51266520(-) A-G intron -    22484847
chr14:51266523(-) A-G intron -    22484847
chr14:51266526(-) A-G intron -    22484847
chr14:51268084(-) A-G intron -    22484847
chr14:51270752(-) A-G intron -    22484847
chr14:51270762(-) A-G intron -    22484847
chr14:51270797(-) A-G intron -    22484847
chr14:51270842(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NIN
chr14:51186538-51186539(-) m6A 3'UTR       27773535
chr14:51188504-51188505(-) m6A 3'UTR       24981863
chr14:51188595-51188596(-) m6A 3'UTR       24209618//24981863//28052920//22608085
chr14:51188628-51188629(-) m6A 3'UTR       24981863//28052920//22608085
chr14:51188655-51188656(-) m6A 3'UTR       24981863//28052920//22608085
chr14:51188671-51188672(-) m6A 3'UTR       24981863//28052920//22608085
chr14:51188704-51188705(-) m6A 3'UTR       24981863//28052920//22608085
chr14:51188772-51188773(-) m6A 3'UTR       24981863//27773535//22608085
chr14:51188831-51188832(-) m6A 3'UTR       22608085
chr14:51188915-51188916(-) m6A 3'UTR       22608085
chr14:51188925-51188926(-) m6A 3'UTR       22608085
chr14:51188951-51188952(-) m6A 3'UTR       22608085
chr14:51190032-51190033(-) m6A 3'UTR       24981863//22608085
chr14:51190087-51190088(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr14:51190130-51190131(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr14:51190175-51190176(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr14:51190290-51190291(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr14:51190303-51190304(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr14:51190352-51190353(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr14:51190379-51190380(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr14:51192673-51192674(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085
chr14:51192718-51192719(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//22608085
chr14:51192724-51192725(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//22608085
chr14:51192730-51192731(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//22608085
chr14:51192772-51192773(-) m6A 3'UTR//CDS//exon       24284625//24981863//22608085
chr14:51192779-51192780(-) m6A 3'UTR//CDS//exon       24284625//24981863//22608085
chr14:51192838-51192839(-) m6A exon//intron       22608085
chr14:51194366-51194367(-) m6A 3'UTR//intron       -
chr14:51194403-51194404(-) m6A 3'UTR//intron       -
chr14:51196254-51196255(-) m6A 3'UTR//CDS       -
chr14:51196263-51196264(-) m6A 3'UTR//CDS       -
chr14:51196268-51196269(-) m6A 3'UTR//CDS       -
chr14:51196276-51196277(-) m6A 3'UTR//CDS       -
chr14:51196295-51196296(-) m6A 3'UTR//CDS       -
chr14:51204878-51204879(-) m6A CDS       24981863
chr14:51204954-51204955(-) m6A CDS       24981863//27773535//27371828
chr14:51204962-51204963(-) m6A CDS       24981863//27773535//27371828
chr14:51206046-51206047(-) m6A CDS       24981863//27773535//27371828
chr14:51206059-51206060(-) m6A CDS       24981863//27773535//27371828
chr14:51206072-51206073(-) m6A CDS       24981863//27773535//27371828
chr14:51206109-51206110(-) m6A CDS//exon       27773535//27371828
chr14:51206137-51206138(-) m6A CDS//exon       27773535//27371828
chr14:51214712-51214713(-) m6A CDS       27773535
chr14:51214727-51214728(-) m6A CDS       27773535
chr14:51214746-51214747(-) m6A CDS       27773535
chr14:51214768-51214769(-) m6A CDS       27773535
chr14:51219256-51219257(-) m6A CDS       24981863//27773535//22608085
chr14:51219283-51219284(-) m6A CDS       24981863//28052920//27773535//22608085
chr14:51219305-51219306(-) m6A CDS       24981863//28052920//27773535//27371828//22608085
chr14:51219358-51219359(-) m6A CDS       24981863//28052920//27773535//27371828//22608085
chr14:51219367-51219368(-) m6A CDS       24981863//28052920//27773535//27371828//22608085
chr14:51219377-51219378(-) m6A CDS       24981863//28052920//27773535//27371828//22608085
chr14:51219386-51219387(-) m6A CDS       24981863//28052920//27773535//27371828//22608085
chr14:51219400-51219401(-) m6A CDS       24981863//28052920//27773535//27371828//22608085
chr14:51219428-51219429(-) m6A CDS       24981863//28052920//27773535//22608085
chr14:51221283-51221284(-) m6A CDS       24981863//28052920//27773535//22608085
chr14:51221328-51221329(-) m6A CDS       24981863//28052920//22608085
chr14:51221336-51221337(-) m6A CDS       24981863//28052920//22608085
chr14:51221487-51221488(-) m6A CDS       24981863//22608085
chr14:51223217-51223218(-) m6A CDS//intron       24981863//22608085
chr14:51223372-51223373(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22608085
chr14:51223382-51223383(-) m6A CDS//intron       24284625//24209618//24981863//28052920//27773535//22608085
chr14:51223422-51223423(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr14:51223446-51223447(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr14:51223495-51223496(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr14:51223504-51223505(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr14:51223557-51223558(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51223575-51223576(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51223642-51223643(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51223673-51223674(-) m6A CDS//intron       24209618//27773535//22608085
chr14:51223686-51223687(-) m6A CDS//intron       24209618//27773535//22608085
chr14:51223766-51223767(-) m6A CDS//intron       24209618//22608085
chr14:51223840-51223841(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51223901-51223902(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51223936-51223937(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224045-51224046(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224079-51224080(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224084-51224085(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224109-51224110(-) m6A CDS//intron       24209618//24981863//22608085
chr14:51224132-51224133(-) m6A CDS//intron       24209618//24981863//22608085
chr14:51224176-51224177(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224182-51224183(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224193-51224194(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224252-51224253(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224286-51224287(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224358-51224359(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224384-51224385(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224522-51224523(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51224705-51224706(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27371828//22608085
chr14:51224749-51224750(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51224772-51224773(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr14:51224822-51224823(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr14:51224834-51224835(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr14:51224906-51224907(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085
chr14:51224965-51224966(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51224985-51224986(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51224994-51224995(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51225011-51225012(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51225030-51225031(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51225038-51225039(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51225049-51225050(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51225094-51225095(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr14:51225112-51225113(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr14:51225200-51225201(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr14:51225210-51225211(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr14:51225316-51225317(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51225334-51225335(-) m6A CDS//intron       24209618//24981863//27773535//22608085
chr14:51226645-51226646(-) m6A CDS       24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr14:51226690-51226691(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:51226722-51226723(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr14:51226783-51226784(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr14:51226836-51226837(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr14:51226867-51226868(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr14:51226939-51226940(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:51226972-51226973(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085
chr14:51227015-51227016(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22608085
chr14:51227046-51227047(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22608085
chr14:51228525-51228526(-) m6A CDS       24209618//24981863//27773535//22608085
chr14:51228541-51228542(-) m6A CDS       24209618//24981863//27773535//22608085
chr14:51228555-51228556(-) m6A CDS       24209618//24981863//27773535//22608085
chr14:51228567-51228568(-) m6A CDS       27773535
chr14:51230547-51230548(-) m6A CDS       27773535
chr14:51233063-51233064(-) m6A CDS       27773535
chr14:51237127-51237128(-) m6A CDS       24981863
chr14:51237139-51237140(-) m6A CDS       24981863
chr14:51237149-51237150(-) m6A CDS       24981863//28052920//27773535
chr14:51237171-51237172(-) m6A CDS       24981863//28052920//27773535
chr14:51237177-51237178(-) m6A CDS       24981863//28052920//27773535
chr14:51237231-51237232(-) m6A CDS       24981863//28052920//27773535
chr14:51237276-51237277(-) m6A CDS       24981863//28052920//27773535
chr14:51237656-51237657(-) m6A CDS       24981863
chr14:51288607-51288608(-) m6A CDS//exon       -
chr14:51288620-51288621(-) m6A CDS//exon       22608085
chr14:51288678-51288679(-) m6A 5'UTR//CDS//exon       24209618//22608085
chr14:51288754-51288755(-) m6A CDS//exon//intron       24209618//22608085
chr14:51297191-51297192(-) m6A 5'UTR//exon       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-146b-3p
Exosome Pulmonary epithelial cell line (BEAS-2B)     31520698
Exosome Plasma     23663360
Exosome Mast cells     -
Microvesicle Fibroblasts|Mesenchymal stem cells     -
NIN
Centrosome Cells (HeLa-Kyoto|HeLa)     33649340
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HeLa-S3 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hsa-miR-146b-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-146b-3p
Interactor2: NIN

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

Starting a new search, please wait ...