Detail Information

Basic Information:


  VIRBase ID:  

HHID00066527

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-342-5p:           CAPZA1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-342-5p CAPZA1
miRBase
Accession/Entrez ID
MIMAT0004694 829
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - CAPPA1//CAPZ//CAZ1

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-342-5p
rs1314257099 chr14:100109686    G/A
rs1393913344 chr14:100109691    T/G
rs1416401513 chr14:100109682    A/G
rs1440243721 chr14:100109690    T/C
rs1171193472 chr14:100109674    G/A
rs1171193472 chr14:100109674    G/C
rs1258216912 chr14:100109676    G/T
rs1434812614 chr14:100109677    G/A
rs752423769 chr14:100109675    G/A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CAPZA1
chr1:113206809(+) A-I      intronic
chr1:113207294(+) A-I      intronic
chr1:113176482(+) A-I      intronic
chr1:113210416(+) A-I      intronic
chr1:113206658(+) A-I      intronic
chr1:113206649(+) A-I      intronic
chr1:113197992(+) A-I      intronic
chr1:113197943(+) A-I      intronic
chr1:113197926(+) A-I      intronic
chr1:113197901(+) A-I      intronic
chr1:113167110(+) A-I      intronic
chr1:113167080(+) A-I      intronic
chr1:113167047(+) A-I      intronic
chr1:113206693(+) A-I      intronic
chr1:113167044(+) A-I      intronic
chr1:113166475(+) A-I      intronic
chr1:113206668(+) A-I      intronic
chr1:113207361(+) A-I      intronic
chr1:113166470(+) A-I      intronic
chr1:113210419(+) A-I      intronic
chr1:113199663(+) A-I      intronic
chr1:113206704(+) A-I      intronic
chr1:113206782(+) A-I      intronic
chr1:113197838(+) A-I      intronic
chr1:113206639(+) A-I      intronic
chr1:113206739(+) A-I      intronic
chr1:113207850(+) A-I      intronic
chr1:113186702(+) A-I      intronic
chr1:113180188(+) A-I      intronic
chr1:113180264(+) A-I      intronic
chr1:113166439(+) A-I      intronic
chr1:113206316(+) A-I      intronic
chr1:113186531(+) A-I      intronic
chr1:113181037(+) A-I      intronic
chr1:113167069(+) A-I      intronic
chr1:113181122(+) A-I      intronic
chr1:113207838(+) A-I      intronic
chr1:113181132(+) A-I      intronic
chr1:113206723(+) A-I      intronic
chr1:113206703(+) A-I      intronic
chr1:113207350(+) A-I      intronic
chr1:113181325(+) A-I      intronic
chr1:113181395(+) A-I      intronic
chr1:113167035(+) A-I      intronic
chr1:113181396(+) A-I      intronic
chr1:113206269(+) A-I      intronic
chr1:113167021(+) A-I      intronic
chr1:113181504(+) A-I      intronic
chr1:113198078(+) A-I      intronic
chr1:113207507(+) A-I      intronic
chr1:113207472(+) A-I      intronic
chr1:113188037(+) A-I      intronic
chr1:113184320(+) A-I      intronic
chr1:113197949(+) A-I      intronic
chr1:113198079(+) A-I      intronic
chr1:113198407(+) A-I      intronic
chr1:113184891(+) A-I      intronic
chr1:113206683(+) A-I      intronic
chr1:113197947(+) A-I      intronic
chr1:113185002(+) A-I      intronic
chr1:113166569(+) A-I      intronic
chr1:113166513(+) A-I      intronic
chr1:113185048(+) A-I      intronic
chr1:113207406(+) A-I      intronic
chr1:113197945(+) A-I      intronic
chr1:113185061(+) A-I      intronic
chr1:113206670(+) A-I      intronic
chr1:113186696(+) A-I      intronic
chr1:113207379(+) A-I      intronic
chr1:113197941(+) A-I      intronic
chr1:113197868(+) A-I      intronic
chr1:113184953(+) A-I      intronic
chr1:113166517(+) A-I      intronic
chr1:113198302(+) A-I      intronic
chr1:113197846(+) A-I      intronic
chr1:113188048(+) A-I      intronic
chr1:113206265(+) A-I      intronic
chr1:113185084(+) A-I      intronic
chr1:113188040(+) A-I      intronic
chr1:113198311(+) A-I      intronic
chr1:113191454(+) A-I      intronic
chr1:113191425(+) A-I      intronic
chr1:113206263(+) A-I      intronic
chr1:113165607(+) A-I      intronic
chr1:113186650(+) A-I      intronic
chr1:113198337(+) A-I      intronic
chr1:113165608(+) A-I      intronic
chr1:113186569(+) A-I      intronic
chr1:113178248(+) A-I      intronic
chr1:113166560(+) A-I      intronic
chr1:113165633(+) A-I      intronic
chr1:113165637(+) A-I      intronic
chr1:113207373(+) A-I      intronic
chr1:113191424(+) A-I      intronic
chr1:113198394(+) A-I      intronic
chr1:113207356(+) A-I      intronic
chr1:113206241(+) A-I      intronic
chr1:113191420(+) A-I      intronic
chr1:113191323(+) A-I      intronic
chr1:113165673(+) A-I      intronic
chr1:113186511(+) A-I      intronic
chr1:113186522(+) A-I      intronic
chr1:113165776(+) A-I      intronic
chr1:113166107(+) A-I      intronic
chr1:113166440(+) A-I      intronic
chr1:113166132(+) A-I      intronic
chr1:113166141(+) A-I      intronic
chr1:113191190(+) A-I      intronic
chr1:113166398(+) A-I      intronic
chr1:113189056(+) A-I      intronic
chr1:113189048(+) A-I      intronic
chr1:113206760(+) A-I      intronic
chr1:113211317(+) A-I      intronic
chr1:113206786(+) A-I      intronic
chr1:113211305(+) A-I      intronic
chr1:113206636(+) A-I      intronic
chr1:113206624(+) A-I      intronic
chr1:113211291(+) A-I      intronic
chr1:113211201(+) A-I      intronic
chr1:113210843(+) A-I      intronic
chr1:113206606(+) A-I      intronic
chr1:113202770(+) A-I      intronic
chr1:113198447(+) A-I      intronic
chr1:113206835(+) A-I      intronic
chr1:113206601(+) A-I      intronic
chr1:113210406(+) A-I      intronic
chr1:113210346(+) A-I      intronic
chr1:113210295(+) A-I      intronic
chr1:113210268(+) A-I      intronic
chr1:113208084(+) A-I      intronic
chr1:113208063(+) A-I      intronic
chr1:113166444(+) A-I      intronic
chr1:113186546(+) A-I      intronic
chr1:113167171(+) A-I      intronic
chr1:113167180(+) A-I      intronic
chr1:113167182(+) A-I      intronic
chr1:113167155(+) A-I      intronic
chr1:113206600(+) A-I      intronic
chr1:113170038(+) A-I      intronic
chr1:113173315(+) A-I      intronic
chr1:113206389(+) A-I      intronic
chr1:113166518(+) A-I      intronic
chr1:113206349(+) A-I      intronic
chr1:113180106(+) A-I      intronic
chr1:113180120(+) A-I      intronic
chr1:113180149(+) A-I      intronic
chr1:113167109(+) A-I      intronic
chr1:113198414(+) A-I      intronic
chr1:113186703(+) A-I      intronic
chr1:113206336(+) A-I      intronic
chr1:113206324(+) A-I      intronic
chr1:113167087(+) A-I      intronic
chr1:113204906(+) A-I      intronic
chr1:113188211(+) A-I      intronic
chr1:113198288(+) A-I      intronic
chr1:113207486(+) A-I      intronic
chr1:113206727(+) A-I      intronic
chr1:113197882(+) A-I      intronic
chr1:113173059(+) A-I      intronic
chr1:113207286(+) A-I      intronic
chr1:113206224(+) A-I      intronic
chr1:113207546(+) A-I      intronic
chr1:113186567(+) A-I      intronic
chr1:113207436(+) A-I      intronic
chr1:113206193(+) A-I      intronic
chr1:113206779(+) A-I      intronic
chr1:113207410(+) A-I      intronic
chr1:113180163(+) A-I      intronic
chr1:113191465(+) A-I      intronic
chr1:113207347(+) A-I      intronic
chr1:113207938(+) A-I      intronic
chr1:113206645(+) A-I      intronic
chr1:113210374(+) A-I      intronic
chr1:113184432(+) A-I      intronic
chr1:113198419(+) A-I      intronic
chr1:113207442(+) A-I      intronic
chr1:113207863(+) A-I      intronic
chr1:113206592(+) A-I      intronic
chr1:113181423(+) A-I      intronic
chr1:113210256(+) A-I      intronic
chr1:113185019(+) A-I      intronic
chr1:113204771(+) A-I      intronic
chr1:113167028(+) A-I      intronic
chr1:113166054(+) A-I      intronic
chr1:113207476(+) A-I      intronic
chr1:113199568(+) A-I      intronic
chr1:113181347(+) A-I      intronic
chr1:113207339(+) A-I      intronic
chr1:113206327(+) A-I      intronic
chr1:113206775(+) A-I      intronic
chr1:113206582(+) A-I      intronic
chr1:113181397(+) A-I      intronic
chr1:113206644(+) A-I      intronic
chr1:113180199(+) A-I      intronic
chr1:113165602(+) A-I      intronic
chr1:113210652(+) A-I      intronic
chr1:113210826(+) A-I      intronic
chr1:113205282(+) A-I      intronic
chr1:113191321(+) A-I      intronic
chr1:113204830(+) A-I      intronic
chr1:113197946(+) A-I      intronic
chr1:113166127(+) A-I      intronic
chr1:113210382(+) A-I      intronic
chr1:113207985(+) A-I      intronic
chr1:113199790(+) A-I      intronic
chr1:113198233(+) A-I      intronic
chr1:113207898(+) A-I      intronic
chr1:113206702(+) A-I      intronic
chr1:113181392(+) A-I      intronic
chr1:113206401(+) A-I      intronic
chr1:113186606(+) A-I      intronic
chr1:113207477(+) A-I      intronic
chr1:113205186(+) A-I      intronic
chr1:113207381(+) A-I      intronic
chr1:113178544(+) A-I      intronic
chr1:113198254(+) A-I      intronic
chr1:113204864(+) A-I      intronic
chr1:113198285(+) A-I      intronic
chr1:113207281(+) A-I      intronic
chr1:113207928(+) A-I      intronic
chr1:113198014(+) A-I      intronic
chr1:113206707(+) A-I      intronic
chr1:113170091(+) A-I      intronic
chr1:113198259(+) A-I      intronic
chr1:113184975(+) A-I      intronic
chr1:113206733(+) A-I      intronic
chr1:113206223(+) A-I      intronic
chr1:113203042(+) A-I      intronic
chr1:113198413(+) A-I      intronic
chr1:113178498(+) A-I      intronic
chr1:113184405(+) A-I      intronic
chr1:113211134(+) A-I      intronic
chr1:113166981(+) A-I      intronic
chr1:113181200(+) A-I      intronic
chr1:113207543(+) A-I      intronic
chr1:113206188(+) A-I      intronic
chr1:113166088(+) A-I      intronic
chr1:113170174(+) A-I      intronic
chr1:113206766(+) A-I      intronic
chr1:113204832(+) A-I      intronic
chr1:113198324(+) A-I      intronic
chr1:113210321(+) A-I      intronic
chr1:113200343(+) A-I      intronic
chr1:113207899(+) A-I      intronic
chr1:113210646(+) A-I      intronic
chr1:113166117(+) A-I      intronic
chr1:113198260(+) A-I      intronic
chr1:113210428(+) A-I      intronic
chr1:113198314(+) A-I      intronic
chr1:113198357(+) A-I      intronic
chr1:113184936(+) A-I      intronic
chr1:113197995(+) A-I      intronic
chr1:113206701(+) A-I      intronic
chr1:113194622(+) A-I      intronic
chr1:113197847(+) A-I      intronic
chr1:113178407(+) A-I      intronic
chr1:113166156(+) A-I      intronic
chr1:113207308(+) A-I      intronic
chr1:113166224(+) A-I      intronic
chr1:113181399(+) A-I      intronic
chr1:113166255(+) A-I      intronic
chr1:113210653(+) A-I      intronic
chr1:113166507(+) A-I      intronic
chr1:113165723(+) A-I      intronic
chr1:113188145(+) A-I      intronic
chr1:113203032(+) A-I      intronic
chr1:113165665(+) A-I      intronic
chr1:113207509(+) A-I      intronic
chr1:113208070(+) A-I      intronic
chr1:113191385(+) A-I      intronic
chr1:113204750(+) A-I      intronic
chr1:113204876(+) A-I      intronic
chr1:113178264(+) A-I      intronic
chr1:113181328(+) A-I      intronic
chr1:113165594(+) A-I      intronic
chr1:113181102(+) A-I      intronic
chr1:113204873(+) A-I      intronic
chr1:113184390(+) A-I      intronic
chr1:113206698(+) A-I      intronic
chr1:113164035(+) A-I      intronic
chr1:113181450(+) A-I      intronic
chr1:113210822(+) A-I      intronic
chr1:113188065(+) A-I      intronic
chr1:113200353(+) A-I      intronic
chr1:113170011(+) A-I      intronic
chr1:113211373(+) A-I      intronic
chr1:113186584(+) A-I      intronic
chr1:113165698(+) A-I      intronic
chr1:113207446(+) A-I      intronic
chr1:113206694(+) A-I      intronic
chr1:113210812(+) A-I      intronic
chr1:113210776(+) A-I      intronic
chr1:113167055(+) A-I      intronic
chr1:113184375(+) A-I      intronic
chr1:113181386(+) A-I      intronic
chr1:113194943(+) A-I      intronic
chr1:113166053(+) A-I      intronic
chr1:113208076(+) A-I      intronic
chr1:113170012(+) A-I      intronic
chr1:113166355(+) A-I      intronic
chr1:113181109(+) A-I      intronic
chr1:113197828(+) A-I      intronic
chr1:113206743(+) A-I      intronic
chr1:113211308(+) A-I      intronic
chr1:113165689(+) A-I      intronic
chr1:113198008(+) A-I      intronic
chr1:113165647(+) A-I      intronic
chr1:113207303(+) A-I      intronic
chr1:113206678(+) A-I      intronic
chr1:113198210(+) A-I      intronic
chr1:113165768(+) A-I      intronic
chr1:113186541(+) A-I      intronic
chr1:113166314(+) A-I      intronic
chr1:113198289(+) A-I      intronic
chr1:113200453(+) A-I      intronic
chr1:113191123(+) A-I      intronic
chr1:113207437(+) A-I      intronic
chr1:113168111(+) A-I      intronic
chr1:113181117(+) A-I      intronic
chr1:113203002(+) A-I      intronic
chr1:113180968(+) A-I      intronic
chr1:113169062(+) A-I      intronic
chr1:113207380(+) A-I      intronic
chr1:113197978(+) A-I      intronic
chr1:113181442(+) A-I      intronic
chr1:113197988(+) A-I      intronic
chr1:113206655(+) A-I      intronic
chr1:113207925(+) A-I      intronic
chr1:113198459(+) A-I      intronic
chr1:113194948(+) A-I      intronic
chr1:113188195(+) A-I      intronic
chr1:113206672(+) A-I      intronic
chr1:113198284(+) A-I      intronic
chr1:113194942(+) A-I      intronic
chr1:113210273(+) A-I      intronic
chr1:113180310(+) A-I      intronic
chr1:113181358(+) A-I      intronic
chr1:113197892(+) A-I      intronic
chr1:113166166(+) A-I      intronic
chr1:113207545(+) A-I      intronic
chr1:113170090(+) A-I      intronic
chr1:113164029(+) A-I      intronic
chr1:113206618(+) A-I      intronic
chr1:113206774(+) A-I      intronic
chr1:113188463(+) A-I      intronic
chr1:113191336(+) A-I      intronic
chr1:113198020(+) A-I      intronic
chr1:113180263(+) A-I      intronic
chr1:113208011(+) A-I      intronic
chr1:113207342(+) A-I      intronic
chr1:113207370(+) A-I      intronic
chr1:113178382(+) A-I      intronic
chr1:113211208(+) A-I      intronic
chr1:113207830(+) A-I      intronic
chr1:113210731(+) A-I      intronic
chr1:113188176(+) A-I      intronic
chr1:113191409(+) A-I      intronic
chr1:113197939(+) A-I      intronic
chr1:113198424(+) A-I      intronic
chr1:113206250(+) A-I      intronic
chr1:113207371(+) A-I      intronic
chr1:113208498(+) A-I      intronic
chr1:113207540(+) A-I      intronic
chr1:113167016(+) A-I      intronic
chr1:113198209(+) A-I      intronic
chr1:113205272(+) A-I      intronic
chr1:113204749(+) A-I      intronic
chr1:113191535(+) A-I      intronic
chr1:113180144(+) A-I      intronic
chr1:113186492(+) A-I      intronic
chr1:113210173(+) A-I      intronic
chr1:113191200(+) A-I      intronic
chr1:113165663(+) A-I      intronic
chr1:113166481(+) A-I      intronic
chr1:113181437(+) A-I      intronic
chr1:113206253(+) A-I      intronic
chr1:113186547(+) A-I      intronic
chr1:113184939(+) A-I      intronic
chr1:113205793(+) A-I      intronic
chr1:113210706(+) A-I      intronic
chr1:113167054(+) A-I      intronic
chr1:113204843(+) A-I      intronic
chr1:113178486(+) A-I      intronic
chr1:113198019(+) A-I      intronic
chr1:113206564(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CAPZA1
chr1:113168111(+) A-I intron -    19478186
chr1:113198288(+) A-I intron -    22327324
chr1:113206592(+) A-I intron -    22327324
chr1:113207436(+) A-I intron -    22327324
chr1:113207437(+) A-I intron -    22327324
chr1:113204864(+) A-I intron -    21960545
chr1:113165594(+) A-G intron -    22484847
chr1:113165602(+) A-G intron -    22484847
chr1:113165647(+) A-G intron -    22484847
chr1:113165663(+) A-G intron -    22484847
chr1:113165665(+) A-G intron -    22484847
chr1:113165689(+) A-G intron -    22484847
chr1:113165698(+) A-G intron -    22484847
chr1:113165723(+) A-G intron -    22484847
chr1:113165768(+) A-G intron -    22484847
chr1:113166156(+) A-G intron -    22484847
chr1:113166166(+) A-G intron -    22484847
chr1:113167028(+) A-G intron -    22484847
chr1:113167054(+) A-G intron -    22484847
chr1:113167055(+) A-G intron -    22484847
chr1:113172718(+) T-G intron -    22484847
chr1:113173059(+) A-G intron -    22484847
chr1:113178264(+) A-G intron -    22484847
chr1:113178382(+) A-G intron -    22484847
chr1:113178407(+) A-G intron -    22484847
chr1:113178486(+) A-G intron -    22484847
chr1:113178498(+) A-G intron -    22484847
chr1:113178544(+) A-G intron -    22484847
chr1:113180144(+) A-G intron -    22484847
chr1:113180163(+) A-G intron -    22484847
chr1:113180199(+) A-G intron -    22484847
chr1:113180263(+) A-G intron -    22484847
chr1:113180968(+) A-G intron -    22484847
chr1:113181102(+) A-G intron -    22484847
chr1:113181328(+) A-G intron -    22484847
chr1:113181347(+) A-G intron -    22484847
chr1:113181358(+) A-G intron -    22484847
chr1:113181386(+) A-G intron -    22484847
chr1:113181392(+) A-G intron -    22484847
chr1:113181397(+) A-G intron -    22484847
chr1:113181399(+) A-G intron -    22484847
chr1:113181423(+) A-G intron -    22484847
chr1:113181442(+) A-G intron -    22484847
chr1:113181450(+) A-G intron -    22484847
chr1:113184405(+) A-G intron -    22484847
chr1:113184939(+) A-G intron -    22484847
chr1:113184959(+) C-T intron -    22484847
chr1:113186567(+) A-G intron -    22484847
chr1:113186584(+) A-G intron -    22484847
chr1:113186606(+) A-G intron -    22484847
chr1:113188044(+) T-C intron -    22484847
chr1:113191321(+) A-G intron -    22484847
chr1:113191336(+) A-G intron -    22484847
chr1:113191385(+) A-G intron -    22484847
chr1:113191409(+) A-G intron -    22484847
chr1:113191465(+) A-G intron -    22484847
chr1:113194590(+) G-A intron -    22484847
chr1:113194635(+) T-C intron -    22484847
chr1:113195016(+) G-A intron -    22484847
chr1:113195026(+) G-T intron -    22484847
chr1:113195873(+) G-A intron -    22484847
chr1:113197828(+) A-G intron -    22484847
chr1:113197882(+) A-G intron -    22484847
chr1:113197892(+) A-G intron -    22484847
chr1:113197946(+) A-G intron -    22484847
chr1:113197978(+) A-G intron -    22484847
chr1:113197988(+) A-G intron -    22484847
chr1:113198014(+) A-G intron -    22484847
chr1:113198019(+) A-G intron -    22484847
chr1:113198020(+) A-G intron -    22484847
chr1:113198121(+) A-C intron -    22484847
chr1:113198209(+) A-G intron -    22484847
chr1:113198210(+) A-G intron -    22484847
chr1:113198233(+) A-G intron -    22484847
chr1:113198254(+) A-G intron -    22484847
chr1:113198259(+) A-G intron -    22484847
chr1:113198260(+) A-G intron -    22484847
chr1:113198272(+) T-C intron -    22484847
chr1:113198284(+) A-G intron -    22484847
chr1:113198285(+) A-G intron -    22484847
chr1:113198288(+) A-G intron -    22484847
chr1:113198289(+) A-G intron -    22484847
chr1:113198314(+) A-G intron -    22484847
chr1:113198324(+) A-G intron -    22484847
chr1:113198357(+) A-G intron -    22484847
chr1:113199790(+) A-G intron -    22484847
chr1:113204771(+) A-G intron -    22484847
chr1:113205039(+) G-T intron -    22484847
chr1:113205040(+) A-T intron -    22484847
chr1:113205706(+) T-C intron -    22484847
chr1:113206188(+) A-G intron -    22484847
chr1:113206193(+) A-G intron -    22484847
chr1:113206223(+) A-G intron -    22484847
chr1:113206224(+) A-G intron -    22484847
chr1:113206237(+) T-C intron -    22484847
chr1:113206250(+) A-G intron -    22484847
chr1:113206327(+) A-G intron -    22484847
chr1:113206582(+) A-G intron -    22484847
chr1:113206592(+) A-G intron -    22484847
chr1:113206618(+) A-G intron -    22484847
chr1:113206644(+) A-G intron -    22484847
chr1:113206645(+) A-G intron -    22484847
chr1:113206672(+) A-G intron -    22484847
chr1:113206678(+) A-G intron -    22484847
chr1:113206727(+) A-G intron -    22484847
chr1:113206733(+) A-G intron -    22484847
chr1:113206774(+) A-G intron -    22484847
chr1:113207281(+) A-G intron -    22484847
chr1:113207286(+) A-G intron -    22484847
chr1:113207308(+) A-G intron -    22484847
chr1:113207339(+) A-G intron -    22484847
chr1:113207347(+) A-G intron -    22484847
chr1:113207370(+) A-G intron -    22484847
chr1:113207371(+) A-G intron -    22484847
chr1:113207380(+) A-G intron -    22484847
chr1:113207381(+) A-G intron -    22484847
chr1:113207410(+) A-G intron -    22484847
chr1:113207436(+) A-G intron -    22484847
chr1:113207437(+) A-G intron -    22484847
chr1:113207442(+) A-G intron -    22484847
chr1:113207446(+) A-G intron -    22484847
chr1:113207476(+) A-G intron -    22484847
chr1:113207477(+) A-G intron -    22484847
chr1:113207509(+) A-G intron -    22484847
chr1:113207817(+) G-T intron -    22484847
chr1:113207818(+) A-T intron -    22484847
chr1:113207830(+) A-G intron -    22484847
chr1:113207863(+) A-G intron -    22484847
chr1:113207898(+) A-G intron -    22484847
chr1:113207899(+) A-G intron -    22484847
chr1:113207925(+) A-G intron -    22484847
chr1:113207938(+) A-G intron -    22484847
chr1:113207985(+) A-G intron -    22484847
chr1:113208011(+) A-G intron -    22484847
chr1:113208070(+) A-G intron -    22484847
chr1:113208076(+) A-G intron -    22484847
chr1:113210256(+) A-G intron -    22484847
chr1:113210321(+) A-G intron -    22484847
chr1:113210706(+) A-G intron -    22484847
chr1:113210776(+) A-G intron -    22484847
chr1:113210822(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CAPZA1
chr1:113161816-113161817(+) m6A 5'UTR       25456834//24981863//22608085
chr1:113161854-113161855(+) m6A 5'UTR       24284625//25456834//24981863//22608085
chr1:113161860-113161861(+) m6A 5'UTR       24284625//25456834//24981863//22608085
chr1:113161939-113161940(+) m6A 5'UTR       24284625//25456834//24981863//22608085
chr1:113161962-113161963(+) m6A 5'UTR       25456834//24981863//22608085
chr1:113161967-113161968(+) m6A 5'UTR       25456834//24981863//22608085
chr1:113162129-113162130(+) m6A 5'UTR       24981863//22608085
chr1:113162190-113162191(+) m6A 5'UTR       24209618//24981863//22608085
chr1:113162253-113162254(+) m6A 5'UTR       24209618//24981863//22608085
chr1:113162274-113162275(+) m6A 5'UTR       24981863//22608085
chr1:113162456-113162457(+) m6A 5'UTR//exon       24284625//24981863//27773535//22608085
chr1:113192140-113192141(+) m6A exon//intron       -
chr1:113197141-113197142(+) m6A CDS//exon//intron       27773535
chr1:113212629-113212630(+) m6A CDS//exon       27773535
chr1:113212637-113212638(+) m6A CDS//exon       27773535
chr1:113212684-113212685(+) Y CDS//exon       26075521
chr1:113212707-113212708(+) m6A CDS//exon       27773535
chr1:113212788-113212789(+) m6A 3'UTR//exon       27773535//22575960
chr1:113212833-113212834(+) m6A 3'UTR//exon       27773535
chr1:113212900-113212901(+) m6A 3'UTR//exon       27773535
chr1:113213326-113213327(+) Y 3'UTR       25219674
chr1:113213515-113213516(+) m6A 3'UTR       27773535
chr1:113213525-113213526(+) m6A 3'UTR       27773535
chr1:113213557-113213558(+) m6A 3'UTR       27773535
chr1:113213645-113213646(+) m6A 3'UTR       27773535
chr1:113213670-113213671(+) m6A 3'UTR       27773535
chr1:113213681-113213682(+) m6A 3'UTR       27773535
chr1:113213988-113213989(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-342-5p
Exosome Primary dendritic cells     21505438
Exosome Plasma     23663360
Exosome Plasma|Serum     24683445
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
CAPZA1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-342-5p
D-Glucose 5793 Drug interaction    RC00007084
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-342-5p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-342-5p
Interactor2: CAPZA1

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region CDS
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

Starting a new search, please wait ...