Basic Information:

  VIRBase ID:  

HHID00066036

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-200c-5p:  MIMAT0004657          MDM2:  NM_001145337     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-200c-5p	MDM2
miRBase Accession/Entrez ID	MIMAT0004657	4193
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACTFS//hdm2//HDMX//LSKB

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-200c-5p	rs1220589670 chr12:6963703    C/T rs1277597787 chr12:6963716    A/C rs372372905 chr12:6963719    G/A rs942672545 chr12:6963713    A/G rs1318673559 chr12:6963704    G/A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MDM2	chr12:69237098(+) A-I      3'UTR chr12:69237511(+) A-I      3'UTR chr12:69237518(+) A-I      3'UTR chr12:69237542(+) A-I      3'UTR chr12:69237551(+) A-I      3'UTR chr12:69228111(+) A-I      intronic chr12:69228093(+) A-I      intronic chr12:69228101(+) A-I      intronic chr12:69228095(+) A-I      intronic chr12:69228072(+) A-I      intronic chr12:69228069(+) A-I      intronic chr12:69228066(+) A-I      intronic chr12:69215399(+) A-I      intronic chr12:69215342(+) A-I      intronic chr12:69215293(+) A-I      intronic chr12:69215274(+) A-I      intronic chr12:69215232(+) A-I      intronic chr12:69237506(+) A-I      3'UTR chr12:69237024(+) A-I      3'UTR chr12:69237083(+) A-I      3'UTR chr12:69237081(+) A-I      3'UTR chr12:69234673(+) A-I      3'UTR chr12:69234186(+) A-I      3'UTR chr12:69237079(+) A-I      3'UTR chr12:69237077(+) A-I      3'UTR chr12:69236992(+) A-I      3'UTR chr12:69236998(+) A-I      3'UTR chr12:69237003(+) A-I      3'UTR chr12:69237019(+) A-I      3'UTR chr12:69237032(+) A-I      3'UTR chr12:69237035(+) A-I      3'UTR chr12:69237041(+) A-I      3'UTR chr12:69237047(+) A-I      3'UTR chr12:69237048(+) A-I      3'UTR chr12:69237049(+) A-I      3'UTR chr12:69237050(+) A-I      3'UTR chr12:69215028(+) A-I      intronic chr12:69215102(+) A-I      intronic chr12:69215247(+) A-I      intronic chr12:69215256(+) A-I      intronic chr12:69215270(+) A-I      intronic chr12:69215283(+) A-I      intronic chr12:69215302(+) A-I      intronic chr12:69215324(+) A-I      intronic chr12:69215347(+) A-I      intronic chr12:69215431(+) A-I      intronic chr12:69215503(+) A-I      intronic chr12:69215735(+) A-I      intronic chr12:69215771(+) A-I      intronic chr12:69215790(+) A-I      intronic chr12:69215861(+) A-I      intronic chr12:69215892(+) A-I      intronic chr12:69215894(+) A-I      intronic chr12:69224494(+) A-I      intronic chr12:69224502(+) A-I      intronic chr12:69224622(+) A-I      intronic chr12:69224636(+) A-I      intronic chr12:69224661(+) A-I      intronic chr12:69226366(+) A-I      intronic chr12:69226372(+) A-I      intronic chr12:69226377(+) A-I      intronic chr12:69226392(+) A-I      intronic chr12:69226486(+) A-I      intronic chr12:69226519(+) A-I      intronic chr12:69226652(+) A-I      intronic chr12:69226698(+) A-I      intronic chr12:69226719(+) A-I      intronic chr12:69226783(+) A-I      intronic chr12:69226785(+) A-I      intronic chr12:69226817(+) A-I      intronic chr12:69226827(+) A-I      intronic chr12:69226831(+) A-I      intronic chr12:69226834(+) A-I      intronic chr12:69204018(+) A-I      intronic chr12:69204022(+) A-I      intronic chr12:69204042(+) A-I      intronic chr12:69204093(+) A-I      intronic chr12:69204098(+) A-I      intronic chr12:69204102(+) A-I      intronic chr12:69204103(+) A-I      intronic chr12:69204106(+) A-I      intronic chr12:69204383(+) A-I      intronic chr12:69204407(+) A-I      intronic chr12:69204443(+) A-I      intronic chr12:69204502(+) A-I      intronic chr12:69204726(+) A-I      intronic chr12:69204745(+) A-I      intronic chr12:69204750(+) A-I      intronic chr12:69204785(+) A-I      intronic chr12:69204828(+) A-I      intronic chr12:69204866(+) A-I      intronic chr12:69204867(+) A-I      intronic chr12:69204879(+) A-I      intronic chr12:69211266(+) A-I      intronic chr12:69211268(+) A-I      intronic chr12:69211275(+) A-I      intronic chr12:69211283(+) A-I      intronic chr12:69211291(+) A-I      intronic chr12:69211343(+) A-I      intronic chr12:69211350(+) A-I      intronic chr12:69211352(+) A-I      intronic chr12:69211353(+) A-I      intronic chr12:69211365(+) A-I      intronic chr12:69211377(+) A-I      intronic chr12:69211378(+) A-I      intronic chr12:69211379(+) A-I      intronic chr12:69211382(+) A-I      intronic chr12:69211438(+) A-I      intronic chr12:69211621(+) A-I      intronic chr12:69211658(+) A-I      intronic chr12:69211682(+) A-I      intronic chr12:69211714(+) A-I      intronic chr12:69211763(+) A-I      intronic chr12:69211802(+) A-I      intronic chr12:69211824(+) A-I      intronic chr12:69214898(+) A-I      intronic chr12:69214921(+) A-I      intronic chr12:69214994(+) A-I      intronic chr12:69214945(+) A-I      intronic chr12:69215800(+) A-I      intronic chr12:69224715(+) A-I      intronic chr12:69223388(+) A-I      intronic chr12:69211441(+) A-I      intronic chr12:69215253(+) A-I      intronic chr12:69228355(+) A-I      intronic chr12:69209491(+) A-I      intronic chr12:69226442(+) A-I      intronic chr12:69203908(+) A-I      intronic chr12:69214892(+) A-I      intronic chr12:69223455(+) A-I      intronic chr12:69215269(+) A-I      intronic chr12:69215893(+) A-I      intronic chr12:69204426(+) A-I      intronic chr12:69226434(+) A-I      intronic chr12:69211677(+) A-I      intronic chr12:69203983(+) A-I      intronic chr12:69211354(+) A-I      intronic chr12:69204100(+) A-I      intronic chr12:69224544(+) A-I      intronic chr12:69215341(+) A-I      intronic chr12:69203828(+) A-I      intronic chr12:69225714(+) A-I      intronic chr12:69223381(+) A-I      intronic chr12:69204011(+) A-I      intronic chr12:69215261(+) A-I      intronic chr12:69223387(+) A-I      intronic chr12:69211344(+) A-I      intronic chr12:69228102(+) A-I      intronic chr12:69211522(+) A-I      intronic chr12:69204303(+) A-I      intronic chr12:69211435(+) A-I      intronic chr12:69203934(+) A-I      intronic chr12:69211408(+) A-I      intronic chr12:69215405(+) A-I      intronic chr12:69211780(+) A-I      intronic chr12:69211759(+) A-I      intronic chr12:69223345(+) A-I      intronic chr12:69224755(+) A-I      intronic chr12:69223360(+) A-I      intronic chr12:69215774(+) A-I      intronic chr12:69211717(+) A-I      intronic chr12:69224716(+) A-I      intronic chr12:69226395(+) A-I      intronic chr12:69224598(+) A-I      intronic chr12:69226378(+) A-I      intronic chr12:69215008(+) A-I      intronic chr12:69225704(+) A-I      intronic chr12:69204040(+) A-I      intronic chr12:69203931(+) A-I      intronic chr12:69238673(+) A-I      3'UTR chr12:69234810(+) A-I      3'UTR chr12:69238769(+) A-I      3'UTR chr12:69234475(+) A-I      3'UTR chr12:69234764(+) A-I      3'UTR chr12:69231233(+) A-I      intronic chr12:69228005(+) A-I      intronic chr12:69224591(+) A-I      intronic chr12:69215736(+) A-I      intronic chr12:69211297(+) A-I      intronic chr12:69228036(+) A-I      intronic chr12:69215423(+) A-I      intronic chr12:69226324(+) A-I      intronic chr12:69224580(+) A-I      intronic chr12:69225724(+) A-I      intronic chr12:69205717(+) A-I      intronic chr12:69203941(+) A-I      intronic chr12:69211409(+) A-I      intronic chr12:69215025(+) A-I      intronic chr12:69225754(+) A-I      intronic chr12:69204676(+) A-I      intronic chr12:69223435(+) A-I      intronic chr12:69215752(+) A-I      intronic chr12:69207877(+) A-I      intronic chr12:69211480(+) A-I      intronic chr12:69224690(+) A-I      intronic chr12:69203882(+) A-I      intronic chr12:69204825(+) A-I      intronic chr12:69214932(+) A-I      intronic chr12:69215366(+) A-I      intronic chr12:69226450(+) A-I      intronic chr12:69203859(+) A-I      intronic chr12:69214931(+) A-I      intronic chr12:69225805(+) A-I      intronic chr12:69211812(+) A-I      intronic chr12:69211771(+) A-I      intronic chr12:69209414(+) A-I      intronic chr12:69214967(+) A-I      intronic chr12:69211296(+) A-I      intronic chr12:69224638(+) A-I      intronic chr12:69215787(+) A-I      intronic chr12:69215325(+) A-I      intronic chr12:69203942(+) A-I      intronic chr12:69226432(+) A-I      intronic chr12:69209355(+) A-I      intronic chr12:69211857(+) A-I      intronic chr12:69225743(+) A-I      intronic chr12:69215248(+) A-I      intronic chr12:69215699(+) A-I      intronic chr12:69211835(+) A-I      intronic chr12:69228031(+) A-I      intronic chr12:69215409(+) A-I      intronic chr12:69214927(+) A-I      intronic chr12:69215760(+) A-I      intronic chr12:69211707(+) A-I      intronic chr12:69214957(+) A-I      intronic chr12:69211754(+) A-I      intronic chr12:69215849(+) A-I      intronic chr12:69211280(+) A-I      intronic chr12:69224646(+) A-I      intronic chr12:69218816(+) A-I      intronic chr12:69216718(+) A-I      intronic chr12:69224508(+) A-I      intronic chr12:69225731(+) A-I      intronic chr12:69212774(+) A-I      intronic chr12:69214928(+) A-I      intronic chr12:69215086(+) A-I      intronic chr12:69203917(+) A-I      intronic chr12:69204306(+) A-I      intronic chr12:69204746(+) A-I      intronic chr12:69226312(+) A-I      intronic chr12:69223393(+) A-I      intronic chr12:69224743(+) A-I      intronic chr12:69215225(+) A-I      intronic chr12:69226563(+) A-I      intronic chr12:69226316(+) A-I      intronic chr12:69203936(+) A-I      intronic chr12:69215333(+) A-I      intronic chr12:69215392(+) A-I      intronic chr12:69226371(+) A-I      intronic chr12:69225638(+) A-I      intronic chr12:69228075(+) A-I      intronic chr12:69223399(+) A-I      intronic chr12:69228088(+) A-I      intronic chr12:69204668(+) A-I      intronic chr12:69223331(+) A-I      intronic chr12:69204448(+) A-I      intronic chr12:69204772(+) A-I      intronic chr12:69226888(+) A-I      intronic chr12:69215761(+) A-I      intronic chr12:69204811(+) A-I      intronic chr12:69203891(+) A-I      intronic chr12:69223467(+) A-I      intronic chr12:69203969(+) A-I      intronic chr12:69203858(+) A-I      intronic chr12:69222225(+) A-I      intronic chr12:69226422(+) A-I      intronic chr12:69221772(+) A-I      intronic chr12:69215245(+) A-I      intronic chr12:69212686(+) A-I      intronic chr12:69211803(+) A-I      intronic chr12:69224664(+) A-I      intronic chr12:69226445(+) A-I      intronic chr12:69204480(+) A-I      intronic chr12:69215822(+) A-I      intronic chr12:69215820(+) A-I      intronic chr12:69204099(+) A-I      intronic chr12:69226314(+) A-I      intronic chr12:69228061(+) A-I      intronic chr12:69211346(+) A-I      intronic chr12:69226353(+) A-I      intronic chr12:69211813(+) A-I      intronic chr12:69223363(+) A-I      intronic chr12:69228438(+) A-I      intronic chr12:69224620(+) A-I      intronic chr12:69203953(+) A-I      intronic chr12:69215353(+) A-I      intronic chr12:69226759(+) A-I      intronic chr12:69211315(+) A-I      intronic chr12:69215700(+) A-I      intronic chr12:69214850(+) A-I      intronic chr12:69204812(+) A-I      intronic chr12:69211274(+) A-I      intronic chr12:69211757(+) A-I      intronic chr12:69203916(+) A-I      intronic chr12:69210402(+) A-I      intronic chr12:69212611(+) A-I      intronic chr12:69215301(+) A-I      intronic chr12:69203906(+) A-I      intronic chr12:69215352(+) A-I      intronic chr12:69228062(+) A-I      intronic chr12:69211334(+) A-I      intronic chr12:69211836(+) A-I      intronic chr12:69225633(+) A-I      intronic chr12:69215343(+) A-I      intronic chr12:69215050(+) A-I      intronic chr12:69204015(+) A-I      intronic chr12:69215288(+) A-I      intronic chr12:69215356(+) A-I      intronic chr12:69211848(+) A-I      intronic chr12:69211444(+) A-I      intronic chr12:69228352(+) A-I      intronic chr12:69211289(+) A-I      intronic chr12:69228136(+) A-I      intronic chr12:69228261(+) A-I      intronic chr12:69215436(+) A-I      intronic chr12:69226489(+) A-I      intronic chr12:69228071(+) A-I      intronic chr12:69215088(+) A-I      intronic chr12:69204807(+) A-I      intronic chr12:69215811(+) A-I      intronic chr12:69224610(+) A-I      intronic chr12:69203945(+) A-I      intronic chr12:69225846(+) A-I      intronic chr12:69215087(+) A-I      intronic chr12:69204702(+) A-I      intronic chr12:69226558(+) A-I      intronic chr12:69204664(+) A-I      intronic chr12:69228012(+) A-I      intronic chr12:69225739(+) A-I      intronic chr12:69224647(+) A-I      intronic chr12:69215351(+) A-I      intronic chr12:69211418(+) A-I      intronic chr12:69214993(+) A-I      intronic chr12:69211678(+) A-I      intronic chr12:69211310(+) A-I      intronic chr12:69211774(+) A-I      intronic chr12:69225699(+) A-I      intronic chr12:69211748(+) A-I      intronic chr12:69215396(+) A-I      intronic chr12:69204381(+) A-I      intronic chr12:69215737(+) A-I      intronic chr12:69204010(+) A-I      intronic chr12:69203905(+) A-I      intronic chr12:69225698(+) A-I      intronic chr12:69224545(+) A-I      intronic chr12:69204423(+) A-I      intronic chr12:69234841(+) A-I      3'UTR chr12:69237023(+) A-I      3'UTR chr12:69234198(+) A-I      3'UTR chr12:69237020(+) A-I      3'UTR chr12:69237552(+) A-I      3'UTR chr12:69238600(+) A-I      3'UTR chr12:69237627(+) A-I      3'UTR chr12:69237056(+) A-I      3'UTR chr12:69237053(+) A-I      3'UTR chr12:69237529(+) A-I      3'UTR chr12:69237014(+) A-I      3'UTR chr12:69234751(+) A-I      3'UTR chr12:69237507(+) A-I      3'UTR chr12:69234729(+) A-I      3'UTR chr12:69237043(+) A-I      3'UTR chr12:69238627(+) A-I      3'UTR chr12:69237509(+) A-I      3'UTR chr12:69237519(+) A-I      3'UTR chr12:69237073(+) A-I      3'UTR chr12:69237510(+) A-I      3'UTR chr12:69237042(+) A-I      3'UTR chr12:69237475(+) A-I      3'UTR chr12:69237534(+) A-I      3'UTR chr12:69234091(+) A-I      3'UTR chr12:69237021(+) A-I      3'UTR chr12:69238687(+) A-I      3'UTR chr12:69237057(+) A-I      3'UTR chr12:69237007(+) A-I      3'UTR chr12:69237526(+) A-I      3'UTR chr12:69237558(+) A-I      3'UTR chr12:69237648(+) A-I      3'UTR chr12:69234171(+) A-I      3'UTR chr12:69237004(+) A-I      3'UTR chr12:69238651(+) A-I      3'UTR chr12:69237013(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MDM2	chr12:69237004(+) A-I exon 3'UTR    19478186   //21960545   //22327324 chr12:69237475(+) A-I exon 3'UTR    15258596 chr12:69237509(+) A-I exon 3'UTR    15258596   //22327324 chr12:69237510(+) A-I exon 3'UTR    15258596   //22327324 chr12:69237519(+) A-I exon 3'UTR    15258596   //21960545 chr12:69203945(+) A-I intron -    22327324 chr12:69211812(+) A-I intron -    22327324 chr12:69214957(+) A-I intron -    22327324 chr12:69214993(+) A-I intron -    22327324 chr12:69215366(+) A-I intron -    22327324 chr12:69215382(+) A-I intron -    21960545   //22327324 chr12:69215760(+) A-I intron -    21960545   //22327324 chr12:69224716(+) A-I intron -    22327324 chr12:69237007(+) A-I intron -    22327324 chr12:69237010(+) A-I intron -    21960545   //22327324 chr12:69237013(+) A-I intron -    21960545   //22327324 chr12:69237014(+) A-I intron -    22327324 chr12:69237020(+) A-I intron -    22327324 chr12:69237021(+) A-I intron -    22327324 chr12:69237042(+) A-I intron -    22327324 chr12:69237053(+) A-I intron -    21960545   //22327324 chr12:69237056(+) A-I intron -    22327324 chr12:69237073(+) A-I intron -    22327324 chr12:69237507(+) A-I intron -    22327324 chr12:69237526(+) A-I intron -    21960545   //22327324 chr12:69237552(+) A-I intron -    22327324 chr12:69215396(+) A-I intron -    21960545 chr12:69237043(+) A-I intron -    21960545 chr12:69237534(+) A-I intron -    21960545 chr12:69215761(+) A-I intron -    21960545 chr12:69237643(+) A-I intron -    21960545 chr12:69237648(+) A-I intron -    21960545 chr12:69203945(+) A-G intron -    22484847 chr12:69211297(+) A-G intron -    22484847 chr12:69211707(+) A-G intron -    22484847 chr12:69211771(+) A-G intron -    22484847 chr12:69211812(+) A-G intron -    22484847 chr12:69214850(+) A-G intron -    22484847 chr12:69214927(+) A-G intron -    22484847 chr12:69214928(+) A-G intron -    22484847 chr12:69214957(+) A-G intron -    22484847 chr12:69214993(+) A-G intron -    22484847 chr12:69215261(+) A-G intron -    22484847 chr12:69215351(+) A-G intron -    22484847 chr12:69215356(+) A-G intron -    22484847 chr12:69215366(+) A-G intron -    22484847 chr12:69215392(+) A-G intron -    22484847 chr12:69215396(+) A-G intron -    22484847 chr12:69215760(+) A-G intron -    22484847 chr12:69215800(+) A-G intron -    22484847 chr12:69223381(+) A-G intron -    22484847 chr12:69224545(+) A-G intron -    22484847 chr12:69224580(+) A-G intron -    22484847 chr12:69224638(+) A-G intron -    22484847 chr12:69224646(+) A-G intron -    22484847 chr12:69224647(+) A-G intron -    22484847 chr12:69224716(+) A-G intron -    22484847 chr12:69225805(+) A-G intron -    22484847 chr12:69226353(+) A-G intron -    22484847 chr12:69226432(+) A-G intron -    22484847 chr12:69226434(+) A-G intron -    22484847 chr12:69226759(+) A-G intron -    22484847 chr12:69234729(+) A-G intron -    22484847 chr12:69237004(+) A-G intron -    22484847 chr12:69237043(+) A-G intron -    22484847 chr12:69237534(+) A-G intron -    22484847 chr12:69203828(+) A-G intron -    22484847 chr12:69203830(+) C-A intron -    22484847 chr12:69203843(+) T-G intron -    22484847 chr12:69203858(+) A-G intron -    22484847 chr12:69203859(+) A-G intron -    22484847 chr12:69203882(+) A-G intron -    22484847 chr12:69203906(+) A-G intron -    22484847 chr12:69203908(+) A-G intron -    22484847 chr12:69203916(+) A-G intron -    22484847 chr12:69203917(+) A-G intron -    22484847 chr12:69203931(+) A-G intron -    22484847 chr12:69203936(+) A-G intron -    22484847 chr12:69203941(+) A-G intron -    22484847 chr12:69203942(+) A-G intron -    22484847 chr12:69203953(+) A-G intron -    22484847 chr12:69203969(+) A-G intron -    22484847 chr12:69203983(+) A-G intron -    22484847 chr12:69203994(+) G-A intron -    22484847 chr12:69204010(+) A-G intron -    22484847 chr12:69204015(+) A-G intron -    22484847 chr12:69204040(+) A-G intron -    22484847 chr12:69204100(+) A-G intron -    22484847 chr12:69204104(+) G-A intron -    22484847 chr12:69204303(+) A-G intron -    22484847 chr12:69204306(+) A-G intron -    22484847 chr12:69204381(+) A-G intron -    22484847 chr12:69204403(+) G-A intron -    22484847 chr12:69204423(+) A-G intron -    22484847 chr12:69204426(+) A-G intron -    22484847 chr12:69204448(+) A-G intron -    22484847 chr12:69204664(+) A-G intron -    22484847 chr12:69204668(+) A-G intron -    22484847 chr12:69204676(+) A-G intron -    22484847 chr12:69204702(+) A-G intron -    22484847 chr12:69204737(+) A-C intron -    22484847 chr12:69204746(+) A-G intron -    22484847 chr12:69204749(+) G-A intron -    22484847 chr12:69204772(+) A-G intron -    22484847 chr12:69204807(+) A-G intron -    22484847 chr12:69204811(+) A-G intron -    22484847 chr12:69204812(+) A-G intron -    22484847 chr12:69204825(+) A-G intron -    22484847 chr12:69205525(+) G-A intron -    22484847 chr12:69205545(+) A-C intron -    22484847 chr12:69205570(+) T-C intron -    22484847 chr12:69205717(+) A-G intron -    22484847 chr12:69207877(+) A-G intron -    22484847 chr12:69208022(+) T-C intron -    22484847 chr12:69209414(+) A-G intron -    22484847 chr12:69209482(+) T-C intron -    22484847 chr12:69210171(+) G-T intron -    22484847 chr12:69210264(+) T-C intron -    22484847 chr12:69210265(+) G-A intron -    22484847 chr12:69210422(+) C-T intron -    22484847 chr12:69211274(+) A-G intron -    22484847 chr12:69211280(+) A-G intron -    22484847 chr12:69211281(+) G-A intron -    22484847 chr12:69211289(+) A-G intron -    22484847 chr12:69211296(+) A-G intron -    22484847 chr12:69211304(+) T-C intron -    22484847 chr12:69211310(+) A-G intron -    22484847 chr12:69211315(+) A-G intron -    22484847 chr12:69211344(+) A-G intron -    22484847 chr12:69211346(+) A-G intron -    22484847 chr12:69211354(+) A-G intron -    22484847 chr12:69211367(+) T-C intron -    22484847 chr12:69211408(+) A-G intron -    22484847 chr12:69211409(+) A-G intron -    22484847 chr12:69211418(+) A-G intron -    22484847 chr12:69211435(+) A-G intron -    22484847 chr12:69211441(+) A-G intron -    22484847 chr12:69211480(+) A-G intron -    22484847 chr12:69211677(+) A-G intron -    22484847 chr12:69211678(+) A-G intron -    22484847 chr12:69211717(+) A-G intron -    22484847 chr12:69211748(+) A-G intron -    22484847 chr12:69211757(+) A-G intron -    22484847 chr12:69211759(+) A-G intron -    22484847 chr12:69211774(+) A-G intron -    22484847 chr12:69211780(+) A-G intron -    22484847 chr12:69211813(+) A-G intron -    22484847 chr12:69211835(+) A-G intron -    22484847 chr12:69211836(+) A-G intron -    22484847 chr12:69211848(+) A-G intron -    22484847 chr12:69212547(+) C-T intron -    22484847 chr12:69212548(+) T-C intron -    22484847 chr12:69212611(+) A-G intron -    22484847 chr12:69213348(+) C-T intron -    22484847 chr12:69213564(+) T-C intron -    22484847 chr12:69214892(+) A-G intron -    22484847 chr12:69214931(+) A-G intron -    22484847 chr12:69214932(+) A-G intron -    22484847 chr12:69214945(+) A-G intron -    22484847 chr12:69214967(+) A-G intron -    22484847 chr12:69214989(+) G-A intron -    22484847 chr12:69215008(+) A-G intron -    22484847 chr12:69215025(+) A-G intron -    22484847 chr12:69215086(+) A-G intron -    22484847 chr12:69215087(+) A-G intron -    22484847 chr12:69215088(+) A-G intron -    22484847 chr12:69215245(+) A-G intron -    22484847 chr12:69215248(+) A-G intron -    22484847 chr12:69215253(+) A-G intron -    22484847 chr12:69215288(+) A-G intron -    22484847 chr12:69215317(+) G-A intron -    22484847 chr12:69215341(+) A-G intron -    22484847 chr12:69215343(+) A-G intron -    22484847 chr12:69215352(+) A-G intron -    22484847 chr12:69215353(+) A-G intron -    22484847 chr12:69215405(+) A-G intron -    22484847 chr12:69215423(+) A-G intron -    22484847 chr12:69215434(+) T-C intron -    22484847 chr12:69215728(+) A-T intron -    22484847 chr12:69215736(+) A-G intron -    22484847 chr12:69215737(+) A-G intron -    22484847 chr12:69215752(+) A-G intron -    22484847 chr12:69215761(+) A-G intron -    22484847 chr12:69215774(+) A-G intron -    22484847 chr12:69215822(+) A-G intron -    22484847 chr12:69215849(+) A-G intron -    22484847 chr12:69215893(+) A-G intron -    22484847 chr12:69215903(+) G-A intron -    22484847 chr12:69216566(+) G-A intron -    22484847 chr12:69216679(+) T-C intron -    22484847 chr12:69216684(+) T-C intron -    22484847 chr12:69216718(+) A-G intron -    22484847 chr12:69218841(+) G-T intron -    22484847 chr12:69218888(+) T-C intron -    22484847 chr12:69218894(+) A-C intron -    22484847 chr12:69218920(+) T-C intron -    22484847 chr12:69220265(+) T-C intron -    22484847 chr12:69220429(+) A-C intron -    22484847 chr12:69220430(+) A-C intron -    22484847 chr12:69220784(+) G-A intron -    22484847 chr12:69220872(+) T-C intron -    22484847 chr12:69221679(+) G-A intron -    22484847 chr12:69222240(+) C-T intron -    22484847 chr12:69223276(+) G-A intron -    22484847 chr12:69223331(+) A-G intron -    22484847 chr12:69223332(+) G-A intron -    22484847 chr12:69223384(+) G-A intron -    22484847 chr12:69223464(+) C-T intron -    22484847 chr12:69224508(+) A-G intron -    22484847 chr12:69224544(+) A-G intron -    22484847 chr12:69224584(+) G-A intron -    22484847 chr12:69224591(+) A-G intron -    22484847 chr12:69224598(+) A-G intron -    22484847 chr12:69224610(+) A-G intron -    22484847 chr12:69224620(+) A-G intron -    22484847 chr12:69224664(+) A-G intron -    22484847 chr12:69224669(+) T-C intron -    22484847 chr12:69224690(+) A-G intron -    22484847 chr12:69224715(+) A-G intron -    22484847 chr12:69224755(+) A-G intron -    22484847 chr12:69225570(+) G-A intron -    22484847 chr12:69225574(+) G-A intron -    22484847 chr12:69225633(+) A-G intron -    22484847 chr12:69225638(+) A-G intron -    22484847 chr12:69225698(+) A-G intron -    22484847 chr12:69225704(+) A-G intron -    22484847 chr12:69225714(+) A-G intron -    22484847 chr12:69225724(+) A-G intron -    22484847 chr12:69225731(+) A-G intron -    22484847 chr12:69225739(+) A-G intron -    22484847 chr12:69225754(+) A-G intron -    22484847 chr12:69225764(+) C-T intron -    22484847 chr12:69225775(+) G-A intron -    22484847 chr12:69225782(+) G-A intron -    22484847 chr12:69225846(+) A-G intron -    22484847 chr12:69226312(+) A-G intron -    22484847 chr12:69226314(+) A-G intron -    22484847 chr12:69226316(+) A-G intron -    22484847 chr12:69226324(+) A-G intron -    22484847 chr12:69226371(+) A-G intron -    22484847 chr12:69226378(+) A-G intron -    22484847 chr12:69226395(+) A-G intron -    22484847 chr12:69226422(+) A-G intron -    22484847 chr12:69226442(+) A-G intron -    22484847 chr12:69226445(+) A-G intron -    22484847 chr12:69226450(+) A-G intron -    22484847 chr12:69226489(+) A-G intron -    22484847 chr12:69226558(+) A-G intron -    22484847 chr12:69226563(+) A-G intron -    22484847 chr12:69228005(+) A-G intron -    22484847 chr12:69228031(+) A-G intron -    22484847 chr12:69228062(+) A-G intron -    22484847 chr12:69228136(+) A-T intron -    22484847 chr12:69228438(+) A-G intron -    22484847 chr12:69230753(+) T-A intron -    22484847 chr12:69230754(+) A-T intron -    22484847 chr12:69231264(+) T-C intron -    22484847 chr12:69231390(+) T-C intron -    22484847 chr12:69233986(+) G-A intron -    22484847 chr12:69234074(+) G-A intron -    22484847 chr12:69234378(+) C-T intron -    22484847 chr12:69234475(+) A-G intron -    22484847 chr12:69234643(+) G-T intron -    22484847 chr12:69234715(+) T-C intron -    22484847 chr12:69234737(+) G-A intron -    22484847 chr12:69234747(+) T-C intron -    22484847 chr12:69234810(+) A-G intron -    22484847 chr12:69234841(+) A-G intron -    22484847 chr12:69234868(+) T-C intron -    22484847 chr12:69235135(+) G-C intron -    22484847 chr12:69238651(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MDM2	chr12:69229736-69229737(+) m6A 3'UTR//CDS//intron       27773535 chr12:69229742-69229743(+) m6A 3'UTR//CDS//intron       27773535 chr12:69233190-69233191(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr12:69233198-69233199(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr12:69233245-69233246(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr12:69233330-69233331(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr12:69233407-69233408(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr12:69233414-69233415(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085 chr12:69233460-69233461(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22575960//22608085 chr12:69233515-69233516(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22608085 chr12:69233520-69233521(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22608085 chr12:69233589-69233590(+) m6A 3'UTR//CDS       24284625//24981863//26404942//22608085 chr12:69233685-69233686(+) m6A 3'UTR       26404942 chr12:69234645-69234646(+) m6A 3'UTR       - chr12:69234812-69234813(+) m6A 3'UTR       - chr12:69235395-69235396(+) m6A 3'UTR       24284625//24981863//22608085 chr12:69235406-69235407(+) m6A 3'UTR       24284625//24981863//22608085 chr12:69235461-69235462(+) m6A 3'UTR       24284625//24981863//22608085 chr12:69235487-69235488(+) m6A 3'UTR       24284625//24981863//22608085 chr12:69235526-69235527(+) m6A 3'UTR       24284625//24981863//22608085 chr12:69235545-69235546(+) m6A 3'UTR       24284625//24981863//22608085 chr12:69235727-69235728(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr12:69235793-69235794(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr12:69235810-69235811(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr12:69235847-69235848(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr12:69235941-69235942(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69235954-69235955(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69235972-69235973(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69235989-69235990(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69236016-69236017(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69236034-69236035(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69236051-69236052(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69236072-69236073(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:69236147-69236148(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:69236222-69236223(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085 chr12:69236229-69236230(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//22608085 chr12:69236313-69236314(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr12:69236392-69236393(+) m6A 3'UTR//intron       24981863//22608085 chr12:69236429-69236430(+) m6A 3'UTR//intron       24981863//22608085 chr12:69236623-69236624(+) m6A 3'UTR//intron       24981863 chr12:69236661-69236662(+) m6A 3'UTR//intron       24981863 chr12:69236840-69236841(+) Y 3'UTR//intron       26075521 chr12:69237013-69237014(+) m6A 3'UTR//exon//intron       - chr12:69237034-69237035(+) m6A 3'UTR//exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-200c-5p	Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Seminal plasma     23539611 Microvesicle Cell lines(GBM46|GBM8|HaCaT|K562|MCF-10A|MCF-7|MGG75)|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocytes     -
	MDM2	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus Human brain microvascular endothelial cells     30419554 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-200c-5p
Interactor2: MDM2

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.