Detail Information

Basic Information:


  VIRBase ID:  

HHID00064895

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30c-2-3p:           AHNAK:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsa-miR-30c-2-3p AHNAK
miRBase
Accession/Entrez ID
MIMAT0004550 79026
Organism Homo sapiens Homo sapiens
Category miRNA mRNA
Alias - AHNAKRS//PM227

ncRNA SNP information:


Resource Symbol SNP ID SNP Position Ref/Alt
miRNASNP-v3 hsa-miR-30c-2-3p
rs1262929323 chr6:71376964    A/G
rs1413659455 chr6:71376968    T/C
rs1421032991 chr6:71376975    C/A
rs1421032991 chr6:71376975    C/G
rs1488181071 chr6:71376967    G/T
rs747913643 chr6:71376976    C/A
rs760276048 chr6:71376974    G/C
rs775896072 chr6:71376969    A/G

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR AHNAK
chr11:62236738(-) A-I      intronic
chr11:62236691(-) A-I      intronic
chr11:62236732(-) A-I      intronic
chr11:62236726(-) A-I      intronic
chr11:62224590(-) A-I      intronic
chr11:62229142(-) A-I      intronic
chr11:62235708(-) A-I      intronic
chr11:62219513(-) A-I      intronic
chr11:62223065(-) A-I      intronic
chr11:62236667(-) A-I      intronic
chr11:62236679(-) A-I      intronic
chr11:62236686(-) A-I      intronic
chr11:62240500(-) A-I      intronic
chr11:62243188(-) A-I      intronic
chr11:62243209(-) A-I      intronic
chr11:62243815(-) A-I      intronic
chr11:62246120(-) A-I      intronic
chr11:62246405(-) A-I      intronic
chr11:62246707(-) A-I      intronic
chr11:62246742(-) A-I      intronic
chr11:62246800(-) A-I      intronic
chr11:62249214(-) A-I      intronic
chr11:62249217(-) A-I      intronic
chr11:62249775(-) A-I      intronic
chr11:62252300(-) A-I      intronic
chr11:62252372(-) A-I      intronic
chr11:62253322(-) A-I      intronic
chr11:62253485(-) A-I      intronic
chr11:62253486(-) A-I      intronic
chr11:62258365(-) A-I      intronic
chr11:62258368(-) A-I      intronic
chr11:62258371(-) A-I      intronic
chr11:62258381(-) A-I      intronic
chr11:62258388(-) A-I      intronic
chr11:62258397(-) A-I      intronic
chr11:62275206(-) A-I      intronic
chr11:62275215(-) A-I      intronic
chr11:62277745(-) A-I      intronic
chr11:62278810(-) A-I      intronic
chr11:62278840(-) A-I      intronic
chr11:62278863(-) A-I      intronic
chr11:62279272(-) A-I      intronic
chr11:62280197(-) A-I      intronic
chr11:62203270(-) A-I      intronic
chr11:62229185(-) A-I      intronic
chr11:62258332(-) A-I      intronic
chr11:62209269(-) A-I      intronic
chr11:62256011(-) A-I      intronic
chr11:62260228(-) A-I      intronic
chr11:62260176(-) A-I      intronic
chr11:62246104(-) A-I      intronic
chr11:62243749(-) A-I      intronic
chr11:62220389(-) A-I      intronic
chr11:62202247(-) A-I      intronic
chr11:62243756(-) A-I      intronic
chr11:62253243(-) A-I      intronic
chr11:62240302(-) A-I      intronic
chr11:62224576(-) A-I      intronic
chr11:62203023(-) A-I      intronic
chr11:62209799(-) A-I      intronic
chr11:62209827(-) A-I      intronic
chr11:62210098(-) A-I      intronic
chr11:62210232(-) A-I      intronic
chr11:62210293(-) A-I      intronic
chr11:62210512(-) A-I      intronic
chr11:62210981(-) A-I      intronic
chr11:62219417(-) A-I      intronic
chr11:62202256(-) A-I      intronic
chr11:62279501(-) A-I      intronic
chr11:62246512(-) A-I      intronic
chr11:62236880(-) A-I      intronic
chr11:62205104(-) A-I      intronic
chr11:62205026(-) A-I      intronic
chr11:62203219(-) A-I      intronic
chr11:62243863(-) A-I      intronic
chr11:62253297(-) A-I      intronic
chr11:62217929(-) A-I      intronic
chr11:62260090(-) A-I      intronic
chr11:62224730(-) A-I      intronic
chr11:62261079(-) A-I      intronic
chr11:62280180(-) A-I      intronic
chr11:62209898(-) A-I      intronic
chr11:62256644(-) A-I      intronic
chr11:62278893(-) A-I      intronic
chr11:62211024(-) A-I      intronic
chr11:62223174(-) A-I      intronic
chr11:62270875(-) A-I      intronic
chr11:62236866(-) A-I      intronic
chr11:62241885(-) A-I      intronic
chr11:62260581(-) A-I      intronic
chr11:62253244(-) A-I      intronic
chr11:62258439(-) A-I      intronic
chr11:62246857(-) A-I      intronic
chr11:62260130(-) A-I      intronic
chr11:62258526(-) A-I      intronic
chr11:62207304(-) A-I      intronic
chr11:62280116(-) A-I      intronic
chr11:62256650(-) A-I      intronic
chr11:62220428(-) A-I      intronic
chr11:62229153(-) A-I      intronic
chr11:62210481(-) A-I      intronic
chr11:62209764(-) A-I      intronic
chr11:62202281(-) A-I      intronic
chr11:62238070(-) A-I      intronic
chr11:62209912(-) A-I      intronic
chr11:62240411(-) A-I      intronic
chr11:62235075(-) A-I      intronic
chr11:62235045(-) A-I      intronic
chr11:62240445(-) A-I      intronic
chr11:62261106(-) A-I      intronic
chr11:62218635(-) A-I      intronic
chr11:62249332(-) A-I      intronic
chr11:62236867(-) A-I      intronic
chr11:62278853(-) A-I      intronic
chr11:62218620(-) A-I      intronic
chr11:62203165(-) A-I      intronic
chr11:62231733(-) A-I      intronic
chr11:62256631(-) A-I      intronic
chr11:62277716(-) A-I      intronic
chr11:62202143(-) A-I      intronic
chr11:62225469(-) A-I      intronic
chr11:62207367(-) A-I      intronic
chr11:62218965(-) A-I      intronic
chr11:62235035(-) A-I      intronic
chr11:62208637(-) A-I      intronic
chr11:62241925(-) A-I      intronic
chr11:62258531(-) A-I      intronic
chr11:62205103(-) A-I      intronic
chr11:62211008(-) A-I      intronic
chr11:62209911(-) A-I      intronic
chr11:62275553(-) A-I      intronic
chr11:62241882(-) A-I      intronic
chr11:62209973(-) A-I      intronic
chr11:62208467(-) A-I      intronic
chr11:62240509(-) A-I      intronic
chr11:62258345(-) A-I      intronic
chr11:62203292(-) A-I      intronic
chr11:62208821(-) A-I      intronic
chr11:62243162(-) A-I      intronic
chr11:62246925(-) A-I      intronic
chr11:62241410(-) A-I      intronic
chr11:62243205(-) A-I      intronic
chr11:62208393(-) A-I      intronic
chr11:62246778(-) A-I      intronic
chr11:62210179(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED AHNAK
chr11:62224730(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AHNAK
chr11:62201030-62201031(-) m6A 3'UTR//exon       24981863
chr11:62201093-62201094(-) m6A 3'UTR//exon       24981863
chr11:62201117-62201118(-) m6A 3'UTR//exon       24981863
chr11:62201337-62201338(-) m6A 3'UTR//CDS//exon       -
chr11:62259262-62259263(-) m6A CDS//exon//intron       -
chr11:62259268-62259269(-) m6A CDS//exon//intron       -
chr11:62283601-62283602(-) Y 3'UTR//intron       26075521
chr11:62283742-62283743(-) m6A 3'UTR//intron       24981863//22575960
chr11:62283757-62283758(-) m6A 3'UTR//intron       24981863//22575960
chr11:62283855-62283856(-) m6A 3'UTR//intron       24981863//26404942
chr11:62283881-62283882(-) m6A 3'UTR//intron       24981863//26404942
chr11:62284035-62284036(-) Cm 3'UTR//intron       -
chr11:62284041-62284042(-) m6A 3'UTR//intron       24284625//26404942
chr11:62284065-62284066(-) m6A 3'UTR//intron       24284625//26404942
chr11:62284097-62284098(-) m6A 3'UTR//intron       24284625//26404942
chr11:62284128-62284129(-) m6A 3'UTR//intron       24284625//26404942
chr11:62284141-62284142(-) m6A 3'UTR//intron       24284625//26404942
chr11:62284173-62284174(-) m6A 3'UTR//intron       24284625//26404942
chr11:62284355-62284356(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62284440-62284441(-) m6A CDS//intron       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62284515-62284516(-) m6A CDS//exon//intron       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62284725-62284726(-) m6A CDS//exon//intron       24284625//24981863//26404942//27371828
chr11:62284770-62284771(-) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//27371828
chr11:62284986-62284987(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285025-62285026(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285062-62285063(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285091-62285092(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285149-62285150(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960
chr11:62285352-62285353(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960
chr11:62285374-62285375(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62285416-62285417(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285509-62285510(-) Am CDS//intron       -
chr11:62285514-62285515(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285530-62285531(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285566-62285567(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285592-62285593(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285682-62285683(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62285787-62285788(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62285947-62285948(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62285964-62285965(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62285974-62285975(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62286016-62286017(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286031-62286032(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286074-62286075(-) Am CDS//intron       -
chr11:62286084-62286085(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286094-62286095(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286231-62286232(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960
chr11:62286240-62286241(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960
chr11:62286273-62286274(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960
chr11:62286283-62286284(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960
chr11:62286338-62286339(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62286388-62286389(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62286442-62286443(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62286519-62286520(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286540-62286541(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286552-62286553(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286650-62286651(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62286771-62286772(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62286863-62286864(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286871-62286872(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62286957-62286958(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62287012-62287013(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62287050-62287051(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62287060-62287061(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62287194-62287195(-) m6A CDS//intron       26404942//22575960
chr11:62287259-62287260(-) m6A CDS//intron       26404942
chr11:62287308-62287309(-) m6A CDS//intron       26404942
chr11:62287395-62287396(-) m6A CDS//intron       26404942//22575960
chr11:62287449-62287450(-) m6A CDS//intron       24981863//26404942//22575960
chr11:62287564-62287565(-) m6A CDS//intron       24981863//27773535//27371828//27773536//22575960//22608085
chr11:62287600-62287601(-) m6A CDS//intron       24981863//27773535//27371828//22575960//22608085
chr11:62287692-62287693(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr11:62287702-62287703(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr11:62287779-62287780(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr11:62287833-62287834(-) m6A CDS//intron       24284625//27773535//22575960//22608085
chr11:62287864-62287865(-) m6A CDS//intron       24284625//27773535//22575960//22608085
chr11:62287948-62287949(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62287984-62287985(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62287996-62287997(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62288053-62288054(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62288163-62288164(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62288259-62288260(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62288275-62288276(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62288298-62288299(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62288407-62288408(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62288530-62288531(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62288608-62288609(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62288752-62288753(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62288787-62288788(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62288830-62288831(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62288956-62288957(-) m6A CDS//intron       24284625//27371828//22575960
chr11:62288992-62288993(-) m6A CDS//intron       24284625//27773535//27371828//22575960
chr11:62289136-62289137(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289171-62289172(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289214-62289215(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289225-62289226(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289256-62289257(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289340-62289341(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62289376-62289377(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62289555-62289556(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr11:62289598-62289599(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62289609-62289610(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62289724-62289725(-) m6A CDS//intron       24284625//24209618//26404942//27773535//22575960//22608085
chr11:62289760-62289761(-) m6A CDS//intron       24284625//24209618//27773535//22575960//22608085
chr11:62289815-62289816(-) Am CDS//intron       -
chr11:62289904-62289905(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289939-62289940(-) m6A CDS//intron       24284625//27773535//22575960
chr11:62289993-62289994(-) m6A CDS//intron       24284625//27773535
chr11:62290236-62290237(-) m6A CDS//intron       24981863//27773535//22608085
chr11:62290288-62290289(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22608085
chr11:62290366-62290367(-) m6A CDS//intron       24284625//27773535//27371828//22608085
chr11:62290377-62290378(-) m6A CDS//intron       24284625//27773535//27371828//22608085
chr11:62290408-62290409(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22608085
chr11:62290492-62290493(-) m6A CDS//intron       24284625//27773535//27371828//22575960//22608085
chr11:62290528-62290529(-) m6A CDS//intron       24284625//24209618//27773535//27371828//22575960//22608085
chr11:62290630-62290631(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62290698-62290699(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62290750-62290751(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62290771-62290772(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62290842-62290843(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62290852-62290853(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62290894-62290895(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62291098-62291099(-) m6A CDS//intron       24284625//24981863//26404942//22575960//22608085
chr11:62291134-62291135(-) m6A CDS//intron       24284625//24981863//26404942//27371828//22575960//22608085
chr11:62291187-62291188(-) m6A CDS//intron       24284625//24981863//26404942//27371828//22575960//22608085
chr11:62291236-62291237(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27371828//22575960//22608085
chr11:62291356-62291357(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62291383-62291384(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62291482-62291483(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62291593-62291594(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22608085
chr11:62291792-62291793(-) m6A CDS//intron       24284625//26404942//27773535
chr11:62292022-62292023(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62292048-62292049(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62292138-62292139(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62292214-62292215(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62292250-62292251(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22608085
chr11:62292285-62292286(-) m6A CDS//intron       24284625//24981863//26404942//22608085
chr11:62292339-62292340(-) m6A CDS//intron       24284625//24981863
chr11:62292370-62292371(-) m6A CDS//intron       24284625
chr11:62292634-62292635(-) m6A CDS//intron       27371828//22575960
chr11:62292712-62292713(-) m6A CDS//intron       24284625//24981863//27371828//22575960//22608085
chr11:62292723-62292724(-) m6A CDS//intron       24284625//24981863//27371828//22575960//22608085
chr11:62292754-62292755(-) m6A CDS//intron       24284625//24981863//27773535//27371828//22575960//22608085
chr11:62292838-62292839(-) m6A CDS//intron       24284625//27773535//27371828//22575960//22608085
chr11:62292874-62292875(-) m6A CDS//intron       24284625//27773535//27371828//22575960//22608085
chr11:62293065-62293066(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293138-62293139(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293222-62293223(-) m6A CDS//intron       24284625//26404942//27773535//27371828//22575960//22608085
chr11:62293258-62293259(-) m6A CDS//intron       24284625//26404942//27773535//22575960//22608085
chr11:62293394-62293395(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62293449-62293450(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62293491-62293492(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62293522-62293523(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62293606-62293607(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293642-62293643(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293734-62293735(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293744-62293745(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293833-62293834(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293864-62293865(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293875-62293876(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62293990-62293991(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62294170-62294171(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62294217-62294218(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:62294248-62294249(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294259-62294260(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294374-62294375(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294425-62294426(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294445-62294446(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294496-62294497(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294595-62294596(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294611-62294612(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294647-62294648(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62294719-62294720(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62294777-62294778(-) m6A CDS//intron       24209618//26404942//27773535//22608085
chr11:62294919-62294920(-) m6A CDS//intron       24209618//26404942//27773535
chr11:62294963-62294964(-) m6A CDS//intron       24209618//26404942//27773535//22575960
chr11:62295060-62295061(-) m6A CDS//intron       24284625//24209618//27773535//27371828//22575960
chr11:62295091-62295092(-) m6A CDS//intron       24284625//24209618//27773535//27371828//22575960
chr11:62295175-62295176(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085
chr11:62295211-62295212(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085
chr11:62295313-62295314(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr11:62295319-62295320(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr11:62295347-62295348(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr11:62295520-62295521(-) m6A CDS//intron       24284625//24209618//27773535//27371828//22575960
chr11:62295645-62295646(-) m6A CDS//intron       24284625//27371828//22575960
chr11:62295676-62295677(-) m6A CDS//intron       24284625//27371828//22575960
chr11:62295760-62295761(-) m6A CDS//intron       24284625//27371828//22575960
chr11:62295796-62295797(-) m6A CDS//intron       24284625//27371828//22575960
chr11:62295807-62295808(-) m6A CDS//intron       24284625//27371828//22575960
chr11:62295904-62295905(-) m6A CDS//intron       27371828//22575960
chr11:62295932-62295933(-) m6A CDS//intron       22575960
chr11:62296105-62296106(-) m6A CDS//intron       24284625//24209618//22575960
chr11:62296147-62296148(-) m6A CDS//intron       24284625//24209618//22575960
chr11:62296306-62296307(-) m6A CDS//intron       24284625//24209618//27773535//22575960
chr11:62296473-62296474(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296506-62296507(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296512-62296513(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296528-62296529(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296611-62296612(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296642-62296643(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296653-62296654(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62296804-62296805(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62296912-62296913(-) m6A CDS//intron       24284625//24209618//27773535//22575960//22608085
chr11:62297068-62297069(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297105-62297106(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297112-62297113(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297133-62297134(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297205-62297206(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297248-62297249(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297259-62297260(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297290-62297291(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62297374-62297375(-) m6A CDS//intron       24981863//26404942//22575960//22608085
chr11:62297902-62297903(-) m6A CDS//intron       24981863//26404942//27371828//22575960//22608085
chr11:62298027-62298028(-) m6A CDS//intron       24981863//27371828//22575960//22608085
chr11:62298058-62298059(-) m6A CDS//intron       24981863//27371828//22575960//22608085
chr11:62298142-62298143(-) m6A CDS//intron       24981863//27371828//22575960//22608085
chr11:62298178-62298179(-) m6A CDS//intron       24981863//27773535//27371828//22575960//22608085
chr11:62298189-62298190(-) m6A CDS//intron       24981863//27773535//27371828//22575960//22608085
chr11:62298286-62298287(-) m6A CDS//intron       24981863//27773535//22575960
chr11:62298314-62298315(-) m6A CDS//intron       27773535//22575960
chr11:62298400-62298401(-) m6A CDS//intron       22575960
chr11:62298411-62298412(-) m6A CDS//intron       22575960
chr11:62298442-62298443(-) m6A CDS//intron       26404942//22575960
chr11:62298526-62298527(-) m6A CDS//intron       24284625//24981863//26404942//22575960//22608085
chr11:62298583-62298584(-) m6A CDS//intron       24284625//24981863//26404942//22575960//22608085
chr11:62298617-62298618(-) Am CDS//intron       -
chr11:62298654-62298655(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62298753-62298754(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62298805-62298806(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62298826-62298827(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62298904-62298905(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62298967-62298968(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299033-62299034(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299116-62299117(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62299158-62299159(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62299168-62299169(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62299189-62299190(-) m6A CDS//intron       24284625//27773535//27371828//22575960//22608085
chr11:62299273-62299274(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62299309-62299310(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62299329-62299330(-) m6A CDS//intron       24284625//24981863//26404942//27773535//22575960//22608085
chr11:62299417-62299418(-) m6A CDS//intron       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299453-62299454(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299500-62299501(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299552-62299553(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299573-62299574(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299657-62299658(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299693-62299694(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299713-62299714(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62299808-62299809(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62299851-62299852(-) m6A CDS//intron       24284625//24209618//27773535//22575960
chr11:62300014-62300015(-) m6A CDS//intron       24284625//24209618//26404942//27773535//22575960
chr11:62300164-62300165(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr11:62300192-62300193(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300198-62300199(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300237-62300238(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300248-62300249(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300255-62300256(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300263-62300264(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300349-62300350(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300397-62300398(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300420-62300421(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr11:62300543-62300544(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr11:62300604-62300605(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27371828//22575960//22608085
chr11:62300918-62300919(-) m6A CDS//intron       24284625//24209618//27773535//22575960
chr11:62301052-62301053(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301091-62301092(-) m6A CDS//intron       24284625//24209618//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301189-62301190(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301267-62301268(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301278-62301279(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301293-62301294(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301324-62301325(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301330-62301331(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301347-62301348(-) Am CDS//intron       -
chr11:62301367-62301368(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301373-62301374(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301452-62301453(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr11:62301463-62301464(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr11:62302515-62302516(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960
chr11:62302521-62302522(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960
chr11:62302544-62302545(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960
chr11:62302592-62302593(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960
chr11:62302658-62302659(-) m6A CDS       24284625//27773535//27371828//27773536//22575960
chr11:62303451-62303452(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960
chr11:62303554-62303555(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960
chr11:62304010-62304011(-) m6A 5'UTR       24284625//24209618//27773535//27371828//27773536
chr11:62311439-62311440(-) Cm intron       -
chr11:62313118-62313119(-) m6A 5'UTR//intron       27371828//27773536//22575960
chr11:62314227-62314228(-) m6A 5'UTR//intron       24981863//27371828//27773536//22575960
chr11:62314249-62314250(-) m6A 5'UTR//intron       24981863//27371828//27773536//22575960
chr11:62323664-62323665(-) m6A 5'UTR       24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsa-miR-30c-2-3p
Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438
Exosome Plasma     23663360
Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     -
Microvesicle Seminal plasma     23539611
Microvesicle Serum     24797360
Microvesicle Fibroblasts|Mesenchymal stem cells     -
Mitochondrion Cell line (HEK-293|HeLa)     22984580
AHNAK
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem
ID
Function Link  
RNAInter hsa-miR-30c-2-3p
Gemcitabine 60750 Drug interaction    RC00006870
Eloxatine 5310940 Drug interaction    RC00006871
5-Fluorouracil 3385 Drug interaction    RC00006869
Resource Symbol Drug Name PubChem ID PMID
NoncoRNA hsa-miR-30c-2-3p

Interaction Network (The top 100 interactions):


Interactor1: hsa-miR-30c-2-3p
Interactor2: AHNAK

Evidence Support:


Weak-Evidence PAR-CLIP
Support Database ViRBase

References:


PMID 22291592 Target region 3'UTR
Source ViRBase Interactor1 expression None
Tissue or cell line EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells Interactor2 expression None
Description We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.

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