Basic Information:

  VIRBase ID:  

HHID00064893

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Host-Host interaction

  Predicted Binding:

 

      hsa-miR-30c-2-3p:  MIMAT0004550          FHIP2A:  NM_001135051     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsa-miR-30c-2-3p	FHIP2A
miRBase Accession/Entrez ID	MIMAT0004550	57700
Organism	Homo sapiens	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA106M7.3//FAM160B1//KIAA1600

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt
miRNASNP-v3	hsa-miR-30c-2-3p	rs1262929323 chr6:71376964    A/G rs1413659455 chr6:71376968    T/C rs1421032991 chr6:71376975    C/A rs1421032991 chr6:71376975    C/G rs1488181071 chr6:71376967    G/T rs747913643 chr6:71376976    C/A rs760276048 chr6:71376974    G/C rs775896072 chr6:71376969    A/G

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FHIP2A	chr10:116599138(+) A-I      intronic chr10:116599114(+) A-I      intronic chr10:116599083(+) A-I      intronic chr10:116599133(+) A-I      intronic chr10:116599012(+) A-I      intronic chr10:116599129(+) A-I      intronic chr10:116586566(+) A-I      intronic chr10:116596937(+) A-I      intronic chr10:116596773(+) A-I      intronic chr10:116602098(+) A-I      intronic chr10:116599886(+) A-I      intronic chr10:116584876(+) A-I      intronic chr10:116584878(+) A-I      intronic chr10:116584906(+) A-I      intronic chr10:116598926(+) A-I      intronic chr10:116610752(+) A-I      intronic chr10:116635380(+) A-I      intronic chr10:116586572(+) A-I      intronic chr10:116598950(+) A-I      intronic chr10:116601286(+) A-I      intronic chr10:116601903(+) A-I      intronic chr10:116610907(+) A-I      intronic chr10:116610753(+) A-I      intronic chr10:116597185(+) A-I      intronic chr10:116610772(+) A-I      intronic chr10:116597168(+) A-I      intronic chr10:116597153(+) A-I      intronic chr10:116616840(+) A-I      intronic chr10:116599154(+) A-I      intronic chr10:116610188(+) A-I      intronic chr10:116599920(+) A-I      intronic chr10:116596925(+) A-I      intronic chr10:116599475(+) A-I      intronic chr10:116601886(+) A-I      intronic chr10:116599494(+) A-I      intronic chr10:116599534(+) A-I      intronic chr10:116596898(+) A-I      intronic chr10:116596846(+) A-I      intronic chr10:116599562(+) A-I      intronic chr10:116596761(+) A-I      intronic chr10:116598987(+) A-I      intronic chr10:116590283(+) A-I      intronic chr10:116598980(+) A-I      intronic chr10:116596714(+) A-I      intronic chr10:116598996(+) A-I      intronic chr10:116599015(+) A-I      intronic chr10:116584825(+) A-I      intronic chr10:116584844(+) A-I      intronic chr10:116584851(+) A-I      intronic chr10:116599051(+) A-I      intronic chr10:116584856(+) A-I      intronic chr10:116599484(+) A-I      intronic chr10:116596684(+) A-I      intronic chr10:116590161(+) A-I      intronic chr10:116599011(+) A-I      intronic chr10:116590160(+) A-I      intronic chr10:116638448(+) A-I      intronic chr10:116590131(+) A-I      intronic chr10:116590125(+) A-I      intronic chr10:116598961(+) A-I      intronic chr10:116599069(+) A-I      intronic chr10:116610365(+) A-I      intronic chr10:116599086(+) A-I      intronic chr10:116610724(+) A-I      intronic chr10:116586577(+) A-I      intronic chr10:116599115(+) A-I      intronic chr10:116598951(+) A-I      intronic chr10:116613543(+) A-I      intronic chr10:116599458(+) A-I      intronic chr10:116590197(+) A-I      intronic chr10:116638552(+) A-I      intronic chr10:116601910(+) A-I      intronic chr10:116597064(+) A-I      intronic chr10:116610251(+) A-I      intronic chr10:116599478(+) A-I      intronic chr10:116583318(+) A-I      intronic chr10:116598986(+) A-I      intronic chr10:116599388(+) A-I      intronic chr10:116635344(+) A-I      intronic chr10:116597180(+) A-I      intronic chr10:116610312(+) A-I      intronic chr10:116610356(+) A-I      intronic chr10:116597019(+) A-I      intronic chr10:116599464(+) A-I      intronic chr10:116599454(+) A-I      intronic chr10:116584804(+) A-I      intronic chr10:116599884(+) A-I      intronic chr10:116584838(+) A-I      intronic chr10:116610309(+) A-I      intronic chr10:116596765(+) A-I      intronic chr10:116597140(+) A-I      intronic chr10:116597018(+) A-I      intronic chr10:116596885(+) A-I      intronic chr10:116599518(+) A-I      intronic chr10:116602104(+) A-I      intronic chr10:116610853(+) A-I      intronic chr10:116599490(+) A-I      intronic chr10:116596852(+) A-I      intronic chr10:116635334(+) A-I      intronic chr10:116610398(+) A-I      intronic chr10:116596826(+) A-I      intronic chr10:116586311(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsa-miR-30c-2-3p	Exosome B cell line (Raji)|Jurkat-derived T cell line (J77cl20)     21505438 Exosome Plasma     23663360 Exosome Breast milk|Cell lines|Epididymal epithelial cells|Osteoblast|Plasma|Primary glioblastoma neurosphere cells|Primary keratinocyte|Saliva|Serum|Urine     - Microvesicle Seminal plasma     23539611 Microvesicle Serum     24797360 Microvesicle Fibroblasts|Mesenchymal stem cells     - Mitochondrion Cell line (HEK-293|HeLa)     22984580
	FHIP2A	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID	Function	Link
RNAInter	hsa-miR-30c-2-3p	Gemcitabine 60750 Drug interaction    RC00006870 Eloxatine 5310940 Drug interaction    RC00006871 5-Fluorouracil 3385 Drug interaction    RC00006869

Resource	Symbol	Drug Name	PubChem ID	PMID
NoncoRNA	hsa-miR-30c-2-3p	Cisplatin 5702198       27506865

Interaction Network (The top 100 interactions):

Interactor1: hsa-miR-30c-2-3p
Interactor2: FHIP2A

Evidence Support:

Weak-Evidence	PAR-CLIP
Support Database	ViRBase

References:

PMID	22291592	Target region	3'UTR
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	We identified 7, 827 miRNA-interaction sites in 3, 492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs.Table S6: High confidence miRNA-interaction sites in 3'UTRs.